FFCP PHASE1:Hg19::chr2:159314786..159314797,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8502 | |EntrezGene=8502 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9026 | |HGNC=9026 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=81bp_to_ENST00000462335_5end | |association_with_transcript=81bp_to_ENST00000462335_5end | ||
|cluster_id=chr2:159314786..159314797,+ | |||
|description=CAGE_peak_12_at_PKP4_5end | |description=CAGE_peak_12_at_PKP4_5end | ||
|id=chr2:159314786..159314797,+ | |id=chr2:159314786..159314797,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.07e-15;2!UBERON:0003918;1.50e-11;10!UBERON:0007687;1.50e-11;10!UBERON:0003056;1.08e-10;3!UBERON:0003104;5.00e-10;31!UBERON:0005754;1.97e-08;1!UBERON:0005425;1.97e-08;1 | |ontology_enrichment_development_v019=UBERON:0007297;1.07e-15;2!UBERON:0003918;1.50e-11;10!UBERON:0007687;1.50e-11;10!UBERON:0003056;1.08e-10;3!UBERON:0003104;5.00e-10;31!UBERON:0005754;1.97e-08;1!UBERON:0005425;1.97e-08;1 | ||
|ontology_enrichment_disease=DOID:7!6.02e-08!39;DOID:305!2.96e-07!106 | |ontology_enrichment_disease=DOID:7!6.02e-08!39;DOID:305!2.96e-07!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!7.97e-12!86;UBERON:0007023!1.24e-11!115;UBERON:0000073!7.96e-11!94;UBERON:0001016!7.96e-11!94;UBERON:0000153!1.09e-10!129;UBERON:0007811!1.09e-10!129;UBERON:0001017!1.48e-10!82;UBERON:0000033!1.73e-10!123;UBERON:0000955!2.95e-10!69;UBERON:0006238!2.95e-10!69;UBERON:0003075!1.22e-09!86;UBERON:0007284!1.22e-09!86;UBERON:0002616!1.35e-09!59;UBERON:0000475!5.18e-09!365;UBERON:0002346!1.11e-08!90;UBERON:0004121!5.45e-08!169;UBERON:0001049!6.73e-08!57;UBERON:0005068!6.73e-08!57;UBERON:0006241!6.73e-08!57;UBERON:0007135!6.73e-08!57;UBERON:0004732!7.40e-08!13;UBERON:0000119!1.29e-07!312;UBERON:0000924!1.97e-07!173;UBERON:0006601!1.97e-07!173;UBERON:0000483!2.99e-07!309;UBERON:0000477!4.05e-07!286;UBERON:0004733!6.96e-07!12;UBERON:0002028!6.96e-07!12;UBERON:0007277!6.96e-07!12 | |ontology_enrichment_uberon=UBERON:0005743!7.97e-12!86;UBERON:0007023!1.24e-11!115;UBERON:0000073!7.96e-11!94;UBERON:0001016!7.96e-11!94;UBERON:0000153!1.09e-10!129;UBERON:0007811!1.09e-10!129;UBERON:0001017!1.48e-10!82;UBERON:0000033!1.73e-10!123;UBERON:0000955!2.95e-10!69;UBERON:0006238!2.95e-10!69;UBERON:0003075!1.22e-09!86;UBERON:0007284!1.22e-09!86;UBERON:0002616!1.35e-09!59;UBERON:0000475!5.18e-09!365;UBERON:0002346!1.11e-08!90;UBERON:0004121!5.45e-08!169;UBERON:0001049!6.73e-08!57;UBERON:0005068!6.73e-08!57;UBERON:0006241!6.73e-08!57;UBERON:0007135!6.73e-08!57;UBERON:0004732!7.40e-08!13;UBERON:0000119!1.29e-07!312;UBERON:0000924!1.97e-07!173;UBERON:0006601!1.97e-07!173;UBERON:0000483!2.99e-07!309;UBERON:0000477!4.05e-07!286;UBERON:0004733!6.96e-07!12;UBERON:0002028!6.96e-07!12;UBERON:0007277!6.96e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;9.08e-11;3!UBERON:0004054;9.08e-11;3!UBERON:0001301;5.58e-09;1!UBERON:0007195;7.26e-09;1!UBERON:0000998;1.97e-08;1!UBERON:0000941;1.97e-08;1!UBERON:0001785;1.97e-08;1!UBERON:0002464;1.97e-08;1!UBERON:0004904;1.97e-08;1!UBERON:0006868;1.97e-08;1!UBERON:0001021;1.97e-08;1!UBERON:0005904;2.74e-08;4 | |ontology_enrichment_uberon_v019=UBERON:0006947;9.08e-11;3!UBERON:0004054;9.08e-11;3!UBERON:0001301;5.58e-09;1!UBERON:0007195;7.26e-09;1!UBERON:0000998;1.97e-08;1!UBERON:0000941;1.97e-08;1!UBERON:0001785;1.97e-08;1!UBERON:0002464;1.97e-08;1!UBERON:0004904;1.97e-08;1!UBERON:0006868;1.97e-08;1!UBERON:0001021;1.97e-08;1!UBERON:0005904;2.74e-08;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,9.56e-11,3;UBERON:0004054,9.56e-11,3;UBERON:0001301,5.59e-09,1;UBERON:0007195,7.01e-09,1;UBERON:0000941,1.37e-08,1;UBERON:0001785,1.37e-08,1;UBERON:0002464,1.37e-08,1;UBERON:0004904,1.37e-08,1;UBERON:0001021,1.37e-08,1;UBERON:0003902,1.37e-08,1;UBERON:0005425,1.37e-08,1;UBERON:0000998,2.13e-08,1;UBERON:0006868,2.13e-08,1;UBERON:0005904,2.85e-08,4;UBERON:0005172,2.66e-07,54;UBERON:0005173,2.66e-07,54 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.472674085820339,0.443458794925128,0.43917392846563,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0.33472061276467,0.402829317109147,0.760272105718513,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0.662045904066094,0.860509862246441,1.06400514659507,0,0,0.49333509683432,0,0,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0.277064115484183,1.31693286264251,0.919463387397059,0.150238058906597,0,0.89694817844431,0.213557388818567,0,1.50045548042201,0.515262646192195,0.772921620136887,0.744467425326359,0,0.0974370051611986,1.26216887122057,0.368199594569197,0,0.355009592516614,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0.234817388471643,0.144366447761074,0,0,2.37061319387782,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.831883446123229,1.24900292158013,1.26161932027148,0.468565659970853,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.640695746278505,0.511707249066704,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0.182091168006717,0,0,0,0,0,0.316654886678627,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,1.03041011647722,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0.275673144969061,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0.744316738719335,0.316379424718726,0.190630193923825,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.818999468447914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0.19924798825107,0,0,0,0.123084805461069,0.311039587661807,0.269605053441981,0,0,0.0986434056369336,0,2.22273980289274,0.969332746095218,0.278304294485554,0,0.520855522170466,0.524759999977174,0,0.1137934482855,0.762760950878299,0,0,0,0,0,0,1.52581736317083,0.995213339381022,0.591095237907095,0,0,0.139423744278603,0.230850775511391,0,0.23056390438806,0,0.54323685961004,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,2.54435528581093,0.649165919226273,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.379119477770928,0,0,0,0,0,0,0.284609546029793,0,0,0.293977192243133,0.0870592065804026,5.06707337901887,0,0.0967563312890851,0,0,0,0,0.225980740780532,0,0,0.126621591911757,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0.372757606696298,0,0.271808412147228,0.418411385249333,0,0.288950589901519,0.600420288709789,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0.403100834920358,0.360299883542404,0,1.02418136999391,0.906574442192831,1.07845670166696,0.196854963029498,0,0,0,0.643012593860077,0.687697182986169,2.07720169014593,0,0,0.121499113316049,0,1.18208560948797,1.31136470337495,0,0,0.575745591958336,0,0,1.27134268827375,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0.387848869084652,0.13223260174269,0.342173675768659,0,0.106787412567695,0,0,0,0,0,1.27668251554036,0,0,0,0,0.157054096250234,1.77213635993397,0.366078794705889,0.250381861413,0.573409195690071,0.110929051536852,0.434674820589684,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.800055529326307,0,0,0,0,1.50109113962448,0,0.226705925512272,0,0.244736704506468,0,0,0,0,0.771656153083659,0.168942440653073,0.256241518587947,1.38172136692479,0.303859956177382,0.276516872303462,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.449604575675217,0,0,0,0,0.345786262321089,0.322951291263702,1.42769420259154,0.0981477185010256,0,0,0,0.762764190934334,0,0,0.150420656698515,0,0,0,0.655087670040387,0.147856086217045,0.270150338473579,0,0.206686796501184,0.126831620387814,0,0,0,0,2.04419884223352,1.60710550763486,0,0,0,0,0.115233987555779,0.171488009437418,0.271878931907327,0.394636641377094,0.118193840883968,0.111231401892069,0,0,0,0,0.431855182437243,0,2.07281978112303,0,0,0,0,0,0,0,0.860454717640555,0.118332000730565,0,1.27016115057279,0,0.31020638566432,0,0,0.196300467230486,0.975343399858155,0.647428837187895,0.102662806856247,0,0,0,0.198950775161368,0,0.11294608203896,0,0.150962843566674,0.231522474323834,0.218559560503957,0,0,0,0.196308467114945,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0,0,0,0,0,0.252332849670158,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0.829169439458779,0,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0.33639558774184,0,0,0.217716747896961,0,0,0.0717222053926763,0,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0.977931553462932,0,0,0,0 | |phase1_expression=0,0,0,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.472674085820339,0.443458794925128,0.43917392846563,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0.33472061276467,0.402829317109147,0.760272105718513,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0.662045904066094,0.860509862246441,1.06400514659507,0,0,0.49333509683432,0,0,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0.277064115484183,1.31693286264251,0.919463387397059,0.150238058906597,0,0.89694817844431,0.213557388818567,0,1.50045548042201,0.515262646192195,0.772921620136887,0.744467425326359,0,0.0974370051611986,1.26216887122057,0.368199594569197,0,0.355009592516614,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0.234817388471643,0.144366447761074,0,0,2.37061319387782,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.831883446123229,1.24900292158013,1.26161932027148,0.468565659970853,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.640695746278505,0.511707249066704,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0.182091168006717,0,0,0,0,0,0.316654886678627,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,1.03041011647722,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0.275673144969061,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0.744316738719335,0.316379424718726,0.190630193923825,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.818999468447914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0.19924798825107,0,0,0,0.123084805461069,0.311039587661807,0.269605053441981,0,0,0.0986434056369336,0,2.22273980289274,0.969332746095218,0.278304294485554,0,0.520855522170466,0.524759999977174,0,0.1137934482855,0.762760950878299,0,0,0,0,0,0,1.52581736317083,0.995213339381022,0.591095237907095,0,0,0.139423744278603,0.230850775511391,0,0.23056390438806,0,0.54323685961004,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,2.54435528581093,0.649165919226273,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.379119477770928,0,0,0,0,0,0,0.284609546029793,0,0,0.293977192243133,0.0870592065804026,5.06707337901887,0,0.0967563312890851,0,0,0,0,0.225980740780532,0,0,0.126621591911757,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0.372757606696298,0,0.271808412147228,0.418411385249333,0,0.288950589901519,0.600420288709789,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0.403100834920358,0.360299883542404,0,1.02418136999391,0.906574442192831,1.07845670166696,0.196854963029498,0,0,0,0.643012593860077,0.687697182986169,2.07720169014593,0,0,0.121499113316049,0,1.18208560948797,1.31136470337495,0,0,0.575745591958336,0,0,1.27134268827375,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0.387848869084652,0.13223260174269,0.342173675768659,0,0.106787412567695,0,0,0,0,0,1.27668251554036,0,0,0,0,0.157054096250234,1.77213635993397,0.366078794705889,0.250381861413,0.573409195690071,0.110929051536852,0.434674820589684,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.800055529326307,0,0,0,0,1.50109113962448,0,0.226705925512272,0,0.244736704506468,0,0,0,0,0.771656153083659,0.168942440653073,0.256241518587947,1.38172136692479,0.303859956177382,0.276516872303462,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.449604575675217,0,0,0,0,0.345786262321089,0.322951291263702,1.42769420259154,0.0981477185010256,0,0,0,0.762764190934334,0,0,0.150420656698515,0,0,0,0.655087670040387,0.147856086217045,0.270150338473579,0,0.206686796501184,0.126831620387814,0,0,0,0,2.04419884223352,1.60710550763486,0,0,0,0,0.115233987555779,0.171488009437418,0.271878931907327,0.394636641377094,0.118193840883968,0.111231401892069,0,0,0,0,0.431855182437243,0,2.07281978112303,0,0,0,0,0,0,0,0.860454717640555,0.118332000730565,0,1.27016115057279,0,0.31020638566432,0,0,0.196300467230486,0.975343399858155,0.647428837187895,0.102662806856247,0,0,0,0.198950775161368,0,0.11294608203896,0,0.150962843566674,0.231522474323834,0.218559560503957,0,0,0,0.196308467114945,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0,0,0,0,0,0.252332849670158,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0.829169439458779,0,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0.33639558774184,0,0,0.217716747896961,0,0,0.0717222053926763,0,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0.977931553462932,0,0,0,0 | ||
|short_description=p12@PKP4 | |short_description=p12@PKP4 | ||
}} | }} |
Latest revision as of 18:04, 17 September 2015
Short description: | p12@PKP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PKP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 81bp_to_ENST00000462335_5end |
EntrezGene: | PKP4 |
HGNC: | 9026 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 9.56e-11 | 3 |
internal male genitalia | 9.56e-11 | 3 |
epididymis | 5.59e-09 | 1 |
stroma of bone marrow | 7.01e-09 | 1 |
cranial nerve II | 1.37e-08 | 1 |
cranial nerve | 1.37e-08 | 1 |
nerve trunk | 1.37e-08 | 1 |
nerve connecting eye with brain | 1.37e-08 | 1 |
nerve | 1.37e-08 | 1 |
retinal neural layer | 1.37e-08 | 1 |
presumptive neural retina | 1.37e-08 | 1 |
seminal vesicle | 2.13e-08 | 1 |
seminal fluid secreting gland | 2.13e-08 | 1 |
duct of male reproductive system | 2.85e-08 | 4 |
abdomen element | 2.66e-07 | 54 |
abdominal segment element | 2.66e-07 | 54 |