FFCP PHASE1:Hg19::chr6:30691483..30691522,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=203068 | |EntrezGene=203068 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=20778 | |HGNC=20778 | ||
|TSSclassifier=strong | |||
|UniProt=Q96B85 | |UniProt=Q96B85 | ||
|association_with_transcript=111bp_to_BC015889_5end | |association_with_transcript=111bp_to_BC015889_5end | ||
|cluster_id=chr6:30691483..30691522,+ | |||
|description=CAGE_peak_4_at_TUBB_5end | |description=CAGE_peak_4_at_TUBB_5end | ||
|id=chr6:30691483..30691522,+ | |id=chr6:30691483..30691522,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.55e-18!180;CL:0002321!3.80e-12!248;CL:0000220!9.78e-12!246;CL:0000393!3.61e-11!60;CL:0000211!3.61e-11!60;CL:0000222!4.16e-11!119;CL:0000183!8.69e-10!59;CL:0000548!1.12e-09!679;CL:0000004!1.12e-09!679;CL:0000255!1.12e-09!679;CL:0000012!3.39e-09!682;CL:0000680!1.06e-08!57;CL:0000056!1.06e-08!57;CL:0000355!1.06e-08!57;CL:0000192!1.61e-08!42;CL:0000514!1.61e-08!42;CL:0000187!2.01e-08!54;CL:0000133!3.90e-07!59 | |ontology_enrichment_celltype=CL:0000055!2.55e-18!180;CL:0002321!3.80e-12!248;CL:0000220!9.78e-12!246;CL:0000393!3.61e-11!60;CL:0000211!3.61e-11!60;CL:0000222!4.16e-11!119;CL:0000183!8.69e-10!59;CL:0000548!1.12e-09!679;CL:0000004!1.12e-09!679;CL:0000255!1.12e-09!679;CL:0000012!3.39e-09!682;CL:0000680!1.06e-08!57;CL:0000056!1.06e-08!57;CL:0000355!1.06e-08!57;CL:0000192!1.61e-08!42;CL:0000514!1.61e-08!42;CL:0000187!2.01e-08!54;CL:0000133!3.90e-07!59 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,2.40e-11,61;CL:0000211,2.40e-11,61;CL:0000222,9.11e-11,121;CL:0002321,2.27e-10,250;CL:0000680,1.04e-08,58;CL:0000056,1.04e-08,58;CL:0000355,1.04e-08,58;CL:0000187,2.15e-08,55;CL:0000192,4.55e-08,43;CL:0000514,4.55e-08,43 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!1.60e-08!70;UBERON:0005256!6.75e-08!143;UBERON:0000914!8.88e-08!83;UBERON:0002329!8.88e-08!83;UBERON:0003077!8.88e-08!83;UBERON:0003059!8.88e-08!83;UBERON:0007282!8.88e-08!83;UBERON:0009618!8.88e-08!83;UBERON:0007285!8.88e-08!83;UBERON:0000486!1.15e-07!82;UBERON:0001134!2.85e-07!61;UBERON:0002036!2.85e-07!61;UBERON:0003082!2.85e-07!61 | |ontology_enrichment_uberon=UBERON:0004290!1.60e-08!70;UBERON:0005256!6.75e-08!143;UBERON:0000914!8.88e-08!83;UBERON:0002329!8.88e-08!83;UBERON:0003077!8.88e-08!83;UBERON:0003059!8.88e-08!83;UBERON:0007282!8.88e-08!83;UBERON:0009618!8.88e-08!83;UBERON:0007285!8.88e-08!83;UBERON:0000486!1.15e-07!82;UBERON:0001134!2.85e-07!61;UBERON:0002036!2.85e-07!61;UBERON:0003082!2.85e-07!61 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,4.74e-11,78;UBERON:0007524,5.60e-09,73;UBERON:0002329,5.81e-09,71;UBERON:0003059,5.81e-09,71;UBERON:0007282,5.81e-09,71;UBERON:0004290,5.81e-09,71;UBERON:0009618,5.81e-09,71;UBERON:0003077,1.41e-08,72;UBERON:0007285,1.41e-08,72;UBERON:0000486,7.53e-08,83;UBERON:0005256,1.28e-07,122;UBERON:0001134,1.42e-07,62;UBERON:0002036,1.42e-07,62;UBERON:0003082,1.42e-07,62;UBERON:0003104,7.30e-07,160;UBERON:0009142,7.30e-07,160;UBERON:0002385,7.41e-07,64;UBERON:0001015,7.41e-07,64;UBERON:0000383,7.41e-07,64 | |||
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| ||
|short_description=p4@TUBB | |short_description=p4@TUBB | ||
}} | }} |
Latest revision as of 18:11, 17 September 2015
Short description: | p4@TUBB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TUBB_5end |
Coexpression cluster: | NA |
Association with transcript: | 111bp_to_BC015889_5end |
EntrezGene: | TUBB |
HGNC: | 20778 |
UniProt: | Q96B85 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 2.40e-11 | 61 |
electrically active cell | 2.40e-11 | 61 |
mesodermal cell | 9.11e-11 | 121 |
embryonic cell | 2.27e-10 | 250 |
muscle precursor cell | 1.04e-08 | 58 |
myoblast | 1.04e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.04e-08 | 58 |
muscle cell | 2.15e-08 | 55 |
smooth muscle cell | 4.55e-08 | 43 |
smooth muscle myoblast | 4.55e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 4.74e-11 | 78 |
dense mesenchyme tissue | 5.60e-09 | 73 |
somite | 5.81e-09 | 71 |
presomitic mesoderm | 5.81e-09 | 71 |
presumptive segmental plate | 5.81e-09 | 71 |
dermomyotome | 5.81e-09 | 71 |
trunk paraxial mesoderm | 5.81e-09 | 71 |
paraxial mesoderm | 1.41e-08 | 72 |
presumptive paraxial mesoderm | 1.41e-08 | 72 |
multilaminar epithelium | 7.53e-08 | 83 |
trunk mesenchyme | 1.28e-07 | 122 |
skeletal muscle tissue | 1.42e-07 | 62 |
striated muscle tissue | 1.42e-07 | 62 |
myotome | 1.42e-07 | 62 |
mesenchyme | 7.30e-07 | 160 |
entire embryonic mesenchyme | 7.30e-07 | 160 |
muscle tissue | 7.41e-07 | 64 |
musculature | 7.41e-07 | 64 |
musculature of body | 7.41e-07 | 64 |