FFCP PHASE1:Hg19::chr1:156785425..156785436,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4914 | |EntrezGene=4914 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8031 | |HGNC=8031 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000489021_5end | |||
|cluster_id=chr1:156785425..156785436,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_4_at_NTRK1_5end | |||
|id=chr1:156785425..156785436,+ | |||
|ontology_enrichment_celltype=CL:0000623!5.40e-12!3;CL:0000825!5.40e-12!3 | |||
|ontology_enrichment_celltype_v019=CL:0002548;7.01e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002548,7.25e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.96e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4556;1.60e-14;3!DOID:3908;2.97e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,1.60e-14,3;DOID:3908,2.97e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.46e-28!115;UBERON:0001905!5.67e-09!2;UBERON:0002757!5.67e-09!2;UBERON:0010134!5.67e-09!2;UBERON:0002784!5.67e-09!2;UBERON:0005408!5.67e-09!2;UBERON:0001899!5.67e-09!2;UBERON:0000200!6.68e-09!6;UBERON:0001049!1.50e-08!57;UBERON:0005068!1.50e-08!57;UBERON:0006241!1.50e-08!57;UBERON:0007135!1.50e-08!57;UBERON:0002616!3.64e-08!59;UBERON:0002780!1.07e-07!41;UBERON:0001890!1.07e-07!41;UBERON:0006240!1.07e-07!41;UBERON:0003075!1.60e-07!86;UBERON:0007284!1.60e-07!86;UBERON:0000955!1.69e-07!69;UBERON:0006238!1.69e-07!69;UBERON:0003080!1.81e-07!42;UBERON:0002298!2.30e-07!8;UBERON:0005743!2.43e-07!86;UBERON:0002346!4.95e-07!90;UBERON:0001017!9.31e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.05e-79;2!UBERON:0002757;1.05e-79;2!UBERON:0010134;1.05e-79;2!UBERON:0005408;1.05e-79;2!UBERON:0001899;1.05e-79;2!UBERON:0003296;1.48e-40;4!UBERON:0010133;1.48e-40;4!UBERON:0002784;1.48e-40;4!UBERON:0001894;1.02e-23;7!UBERON:0000966;3.35e-09;5!UBERON:0005388;3.35e-09;5!UBERON:0001802;3.35e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.05e-79,2;UBERON:0002757,1.05e-79,2;UBERON:0010134,1.05e-79,2;UBERON:0005408,1.05e-79,2;UBERON:0001899,1.05e-79,2;UBERON:0003296,1.48e-40,4;UBERON:0010133,1.48e-40,4;UBERON:0002784,1.48e-40,4;UBERON:0001894,1.02e-23,7;UBERON:0006222,1.02e-23,7;UBERON:0000966,6.78e-08,6;UBERON:0005388,6.78e-08,6;UBERON:0001802,6.78e-08,6 | |||
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|short_description=p4@NTRK1 | |||
}} | }} |
Latest revision as of 18:24, 17 September 2015
Short description: | p4@NTRK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NTRK1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000489021_5end |
EntrezGene: | NTRK1 |
HGNC: | 8031 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac fibroblast | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.05e-79 | 2 |
regional part of epithalamus | 1.05e-79 | 2 |
secretory circumventricular organ | 1.05e-79 | 2 |
circumventricular organ | 1.05e-79 | 2 |
epithalamus | 1.05e-79 | 2 |
gland of diencephalon | 1.48e-40 | 4 |
neuroendocrine gland | 1.48e-40 | 4 |
regional part of diencephalon | 1.48e-40 | 4 |
diencephalon | 1.02e-23 | 7 |
future diencephalon | 1.02e-23 | 7 |
retina | 6.78e-08 | 6 |
photoreceptor array | 6.78e-08 | 6 |
posterior segment of eyeball | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 1.60e-14 | 3 |
non-small cell lung carcinoma | 2.97e-09 | 5 |