FFCP PHASE1:Hg19::chr17:7533439..7533477,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6462 | |EntrezGene=6462 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10839 | |HGNC=10839 | ||
|TSSclassifier=strong | |||
|UniProt=P04278,F5H5Z8,E9PH59,E9PGW1,E9PGQ3,B0FWH2,B0FWH4 | |UniProt=P04278,F5H5Z8,E9PH59,E9PGW1,E9PGQ3,B0FWH2,B0FWH4 | ||
|association_with_transcript=0bp_to_ENST00000380450,ENST00000416273,ENST00000441313,ENST00000441599,ENST00000452698,NM_001040,NM_001146279,NM_001146280,NM_001146281,uc002gie.2,uc010cna.2,uc010cnb.2,uc010cnc.2,uc010cnd.2,uc010vue.1,uc010vuf.1_5end | |association_with_transcript=0bp_to_ENST00000380450,ENST00000416273,ENST00000441313,ENST00000441599,ENST00000452698,NM_001040,NM_001146279,NM_001146280,NM_001146281,uc002gie.2,uc010cna.2,uc010cnb.2,uc010cnc.2,uc010cnd.2,uc010vue.1,uc010vuf.1_5end | ||
|cluster_id=chr17:7533439..7533477,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_SHBG_5end | |description=CAGE_peak_1_at_SHBG_5end | ||
|id=chr17:7533439..7533477,+ | |id=chr17:7533439..7533477,+ | ||
|ontology_enrichment_celltype=CL:0000181!3.22e-24!12;CL:0000417!3.22e-24!12;CL:0000668!3.22e-24!12;CL:0000414!3.22e-24!12;CL:0000412!3.22e-24!12;CL:0000182!3.22e-24!12;CL:0000223!8.32e-07!59 | |ontology_enrichment_celltype=CL:0000181!3.22e-24!12;CL:0000417!3.22e-24!12;CL:0000668!3.22e-24!12;CL:0000414!3.22e-24!12;CL:0000412!3.22e-24!12;CL:0000182!3.22e-24!12;CL:0000223!8.32e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.76e-38;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.00e-38,12;CL:0000223,1.61e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.53e-31;11!UBERON:0009497;5.16e-26;13!UBERON:0003104;1.95e-14;31!UBERON:0001041;4.65e-11;30!CL:0000223;7.20e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!7.95e-25!19;UBERON:0006925!7.95e-25!19;UBERON:0008836!7.95e-25!19;UBERON:0008835!3.10e-21!22;UBERON:0003894!3.10e-21!22;UBERON:0009854!3.03e-20!23;UBERON:0007499!1.67e-18!25;UBERON:0009497!1.67e-18!25;UBERON:0000015!1.67e-18!25;UBERON:0002423!1.67e-18!25;UBERON:0006235!1.67e-18!25;UBERON:0004161!1.67e-18!25;UBERON:0005057!9.85e-18!26;UBERON:0009856!9.85e-18!26;UBERON:0005172!6.86e-16!55;UBERON:0005173!6.86e-16!55;UBERON:0002365!1.26e-14!31;UBERON:0002330!1.26e-14!31;UBERON:0002417!4.54e-14!61;UBERON:0000916!4.54e-14!61;UBERON:0002368!8.85e-13!35;UBERON:0000160!1.67e-12!27;UBERON:0005409!5.95e-12!35;UBERON:0003929!1.52e-11!54;UBERON:0004921!2.90e-11!129;UBERON:0004185!2.90e-11!129;UBERON:0000949!1.33e-09!45;UBERON:0001007!9.19e-09!155;UBERON:0001555!9.19e-09!155;UBERON:0007026!9.19e-09!155;UBERON:0000059!1.06e-08!11;UBERON:0004119!9.74e-08!169;UBERON:0000925!9.74e-08!169;UBERON:0006595!9.74e-08!169;UBERON:0001301!5.19e-07!1;UBERON:0002530!5.73e-07!59;UBERON:0005177!6.29e-07!107;UBERON:0005911!6.55e-07!82 | |ontology_enrichment_uberon=UBERON:0002107!7.95e-25!19;UBERON:0006925!7.95e-25!19;UBERON:0008836!7.95e-25!19;UBERON:0008835!3.10e-21!22;UBERON:0003894!3.10e-21!22;UBERON:0009854!3.03e-20!23;UBERON:0007499!1.67e-18!25;UBERON:0009497!1.67e-18!25;UBERON:0000015!1.67e-18!25;UBERON:0002423!1.67e-18!25;UBERON:0006235!1.67e-18!25;UBERON:0004161!1.67e-18!25;UBERON:0005057!9.85e-18!26;UBERON:0009856!9.85e-18!26;UBERON:0005172!6.86e-16!55;UBERON:0005173!6.86e-16!55;UBERON:0002365!1.26e-14!31;UBERON:0002330!1.26e-14!31;UBERON:0002417!4.54e-14!61;UBERON:0000916!4.54e-14!61;UBERON:0002368!8.85e-13!35;UBERON:0000160!1.67e-12!27;UBERON:0005409!5.95e-12!35;UBERON:0003929!1.52e-11!54;UBERON:0004921!2.90e-11!129;UBERON:0004185!2.90e-11!129;UBERON:0000949!1.33e-09!45;UBERON:0001007!9.19e-09!155;UBERON:0001555!9.19e-09!155;UBERON:0007026!9.19e-09!155;UBERON:0000059!1.06e-08!11;UBERON:0004119!9.74e-08!169;UBERON:0000925!9.74e-08!169;UBERON:0006595!9.74e-08!169;UBERON:0001301!5.19e-07!1;UBERON:0002530!5.73e-07!59;UBERON:0005177!6.29e-07!107;UBERON:0005911!6.55e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;9.90e-40;19!UBERON:0006925;9.90e-40;19!UBERON:0002423;6.24e-30;25!UBERON:0002365;3.31e-23;31!UBERON:0002330;3.31e-23;31!UBERON:0002368;2.41e-20;33!UBERON:0005409;2.03e-19;22!UBERON:0000160;1.40e-18;17!UBERON:0002108;4.43e-18;4!UBERON:0000949;1.40e-14;43!UBERON:0001007;9.59e-13;81!UBERON:0004921;8.16e-12;33!UBERON:0005172;7.38e-11;52!UBERON:0005173;7.38e-11;52!UBERON:0002417;3.62e-10;58!UBERON:0000916;3.62e-10;58!UBERON:0002530;2.53e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.06e-39,19;UBERON:0006925,1.06e-39,19;UBERON:0008836,1.06e-39,19;UBERON:0008835,3.87e-34,22;UBERON:0003894,3.87e-34,22;UBERON:0009854,1.32e-32,23;UBERON:0007499,6.57e-30,25;UBERON:0009497,6.57e-30,25;UBERON:0000015,6.57e-30,25;UBERON:0002423,6.57e-30,25;UBERON:0006235,6.57e-30,25;UBERON:0004161,6.57e-30,25;UBERON:0009856,1.03e-28,26;UBERON:0002365,6.71e-24,31;UBERON:0002330,6.71e-24,31;UBERON:0002368,4.92e-21,35;UBERON:0000160,1.40e-18,17;UBERON:0002108,4.43e-18,4;UBERON:0004921,5.32e-18,118;UBERON:0005409,4.13e-17,25;UBERON:0005172,2.90e-16,54;UBERON:0005173,2.90e-16,54;UBERON:0003929,2.95e-16,54;UBERON:0000949,4.28e-16,45;UBERON:0002417,1.71e-14,60;UBERON:0000916,1.71e-14,60;UBERON:0001007,3.35e-14,145;UBERON:0001555,3.35e-14,145;UBERON:0007026,3.35e-14,145;UBERON:0004119,1.23e-12,160;UBERON:0000925,1.23e-12,160;UBERON:0006595,1.23e-12,160;UBERON:0002530,5.50e-12,59;UBERON:0011216,7.53e-11,223;UBERON:0005911,3.32e-10,82;UBERON:0001041,1.53e-09,87;UBERON:0005177,5.20e-08,101;UBERON:0009569,4.45e-07,112 | |||
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|short_description=p1@SHBG | |short_description=p1@SHBG | ||
}} | }} |
Latest revision as of 18:25, 17 September 2015
Short description: | p1@SHBG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SHBG_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000380450, ENST00000416273, ENST00000441313, ENST00000441599, ENST00000452698, NM_001040, NM_001146279, NM_001146280, NM_001146281, uc002gie.2, uc010cna.2, uc010cnb.2, uc010cnc.2, uc010cnd.2, uc010vue.1, uc010vuf.1_5end |
EntrezGene: | SHBG |
HGNC: | 10839 |
UniProt: | P04278F5H5Z8E9PH59E9PGW1E9PGQ3B0FWH2B0FWH4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.00e-38 | 12 |
endodermal cell | 1.61e-09 | 58 |