FFCP PHASE1:Hg19::chr7:2272566..2272589,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8379 | |EntrezGene=8379 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6762 | |HGNC=6762 | ||
|TSSclassifier=strong | |||
|UniProt=B3KR41,C9JJ38,Q9Y6D9 | |UniProt=B3KR41,C9JJ38,Q9Y6D9 | ||
|association_with_transcript=0bp_to_ENST00000265854,ENST00000402746,ENST00000429779,NM_001013836,NM_001013837,NM_003550,uc003slf.1,uc003slg.1,uc003slh.1,uc003sli.1,uc010ksh.1,uc010ksi.1,uc010ksj.2_5end | |association_with_transcript=0bp_to_ENST00000265854,ENST00000402746,ENST00000429779,NM_001013836,NM_001013837,NM_003550,uc003slf.1,uc003slg.1,uc003slh.1,uc003sli.1,uc010ksh.1,uc010ksi.1,uc010ksj.2_5end | ||
|cluster_id=chr7:2272566..2272589,- | |||
|description=CAGE_peak_3_at_MAD1L1_5end | |description=CAGE_peak_3_at_MAD1L1_5end | ||
|id=chr7:2272566..2272589,- | |id=chr7:2272566..2272589,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.67e-08!90;UBERON:0001049!1.22e-07!57;UBERON:0005068!1.22e-07!57;UBERON:0006241!1.22e-07!57;UBERON:0007135!1.22e-07!57;UBERON:0003075!1.39e-07!86;UBERON:0007284!1.39e-07!86 | |ontology_enrichment_uberon=UBERON:0002346!3.67e-08!90;UBERON:0001049!1.22e-07!57;UBERON:0005068!1.22e-07!57;UBERON:0006241!1.22e-07!57;UBERON:0007135!1.22e-07!57;UBERON:0003075!1.39e-07!86;UBERON:0007284!1.39e-07!86 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.27e-09,86;UBERON:0003075,2.86e-08,82;UBERON:0007284,2.86e-08,82;UBERON:0001049,5.58e-08,56;UBERON:0005068,5.58e-08,56;UBERON:0006241,5.58e-08,56;UBERON:0007135,5.58e-08,56;UBERON:0010371,3.05e-07,104;UBERON:0000073,4.08e-07,53;UBERON:0002616,4.08e-07,53;UBERON:0000025,9.88e-07,192 | |||
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| ||
|short_description=p3@MAD1L1 | |short_description=p3@MAD1L1 | ||
}} | }} |
Latest revision as of 19:23, 17 September 2015
Short description: | p3@MAD1L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MAD1L1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000265854, ENST00000402746, ENST00000429779, NM_001013836, NM_001013837, NM_003550, uc003slf.1, uc003slg.1, uc003slh.1, uc003sli.1, uc010ksh.1, uc010ksi.1, uc010ksj.2_5end |
EntrezGene: | MAD1L1 |
HGNC: | 6762 |
UniProt: | B3KR41C9JJ38Q9Y6D9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 7.27e-09 | 86 |
neural plate | 2.86e-08 | 82 |
presumptive neural plate | 2.86e-08 | 82 |
neural tube | 5.58e-08 | 56 |
neural rod | 5.58e-08 | 56 |
future spinal cord | 5.58e-08 | 56 |
neural keel | 5.58e-08 | 56 |
ecto-epithelium | 3.05e-07 | 104 |
regional part of nervous system | 4.08e-07 | 53 |
regional part of brain | 4.08e-07 | 53 |
tube | 9.88e-07 | 192 |