FFCP PHASE1:Hg19::chr5:39274655..39274666,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2533 | |EntrezGene=2533 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4036 | |HGNC=4036 | ||
|TSSclassifier=strong | |||
|UniProt=D6RFJ5 | |UniProt=D6RFJ5 | ||
|association_with_transcript=-25bp_to_ENST00000510188_5end | |association_with_transcript=-25bp_to_ENST00000510188_5end | ||
|cluster_id=chr5:39274655..39274666,- | |||
|coexpression_cluster_id=C294 | |coexpression_cluster_id=C294 | ||
|description=CAGE_peak_12_at_FYB_5end | |description=CAGE_peak_12_at_FYB_5end | ||
|id=chr5:39274655..39274666,- | |id=chr5:39274655..39274666,- | ||
|ontology_enrichment_celltype=CL:0000766!8.98e-40!76;CL:0002009!7.68e-39!65;CL:0002194!2.61e-38!63;CL:0000576!2.61e-38!63;CL:0000040!2.61e-38!63;CL:0000559!2.61e-38!63;CL:0000557!1.60e-34!71;CL:0000839!2.78e-33!70;CL:0002057!3.68e-28!42;CL:0000860!1.05e-25!45;CL:0000738!3.92e-24!140;CL:0000763!5.70e-24!112;CL:0000049!5.70e-24!112;CL:0002087!2.60e-21!119;CL:0002031!8.61e-18!124;CL:0000037!6.83e-17!172;CL:0000566!6.83e-17!172;CL:0000988!3.54e-15!182;CL:0002032!1.22e-14!165;CL:0000837!1.22e-14!165;CL:0002393!1.99e-14!9;CL:0002397!1.99e-14!9;CL:0000840!5.86e-08!5;CL:0001029!5.86e-08!5;CL:0002619!1.26e-07!3;CL:0000875!2.77e-07!3;CL:0002396!2.77e-07!3 | |ontology_enrichment_celltype=CL:0000766!8.98e-40!76;CL:0002009!7.68e-39!65;CL:0002194!2.61e-38!63;CL:0000576!2.61e-38!63;CL:0000040!2.61e-38!63;CL:0000559!2.61e-38!63;CL:0000557!1.60e-34!71;CL:0000839!2.78e-33!70;CL:0002057!3.68e-28!42;CL:0000860!1.05e-25!45;CL:0000738!3.92e-24!140;CL:0000763!5.70e-24!112;CL:0000049!5.70e-24!112;CL:0002087!2.60e-21!119;CL:0002031!8.61e-18!124;CL:0000037!6.83e-17!172;CL:0000566!6.83e-17!172;CL:0000988!3.54e-15!182;CL:0002032!1.22e-14!165;CL:0000837!1.22e-14!165;CL:0002393!1.99e-14!9;CL:0002397!1.99e-14!9;CL:0000840!5.86e-08!5;CL:0001029!5.86e-08!5;CL:0002619!1.26e-07!3;CL:0000875!2.77e-07!3;CL:0002396!2.77e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002619;3.40e-27;3!CL:0000576;7.10e-17;48!CL:0000766;4.07e-16;69!CL:0000235;4.41e-14;6!CL:0002393;7.63e-14;6!CL:0002397;7.63e-14;6!CL:0000775;6.98e-13;3!CL:0000875;1.59e-12;3!CL:0002396;1.59e-12;3!CL:0000473;1.19e-09;39!CL:0000234;1.19e-09;39!CL:0000763;4.66e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.68e-36,72;CL:0002194,1.76e-34,59;CL:0000576,1.76e-34,59;CL:0000040,1.76e-34,59;CL:0000559,1.76e-34,59;CL:0002009,2.77e-33,61;CL:0000839,1.33e-30,66;CL:0000557,4.08e-30,67;CL:0002619,2.50e-27,3;CL:0000473,3.84e-24,48;CL:0000234,3.84e-24,48;CL:0002393,5.23e-24,9;CL:0002397,5.23e-24,9;CL:0000763,4.84e-23,108;CL:0000049,4.84e-23,108;CL:0000738,1.01e-17,136;CL:0002087,1.53e-16,115;CL:0002031,9.59e-16,120;CL:0000860,2.21e-15,42;CL:0002057,2.21e-15,42;CL:0002032,1.60e-14,161;CL:0000837,1.60e-14,161;CL:0000235,4.13e-14,6;CL:0000037,8.57e-14,168;CL:0000775,5.85e-13,3;CL:0000988,6.10e-13,177;CL:0000875,2.12e-12,3;CL:0002396,2.12e-12,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.76e-12;42!CL:0000049;1.25e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.38e-43!102;UBERON:0003061!3.38e-43!102;UBERON:0002193!3.36e-41!112;UBERON:0002371!2.88e-29!80;UBERON:0001474!2.22e-26!86;UBERON:0007023!4.11e-25!115;UBERON:0002405!5.69e-24!115;UBERON:0004765!4.53e-22!101;UBERON:0001434!4.53e-22!101;UBERON:0003081!7.03e-16!216;UBERON:0000178!6.10e-14!15;UBERON:0000179!6.10e-14!15;UBERON:0000463!6.10e-14!15;UBERON:0002204!8.41e-11!167 | |ontology_enrichment_uberon=UBERON:0002390!3.38e-43!102;UBERON:0003061!3.38e-43!102;UBERON:0002193!3.36e-41!112;UBERON:0002371!2.88e-29!80;UBERON:0001474!2.22e-26!86;UBERON:0007023!4.11e-25!115;UBERON:0002405!5.69e-24!115;UBERON:0004765!4.53e-22!101;UBERON:0001434!4.53e-22!101;UBERON:0003081!7.03e-16!216;UBERON:0000178!6.10e-14!15;UBERON:0000179!6.10e-14!15;UBERON:0000463!6.10e-14!15;UBERON:0002204!8.41e-11!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.67e-12;3!UBERON:0004177;9.87e-08;5!UBERON:0005057;9.87e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.35e-35,98;UBERON:0003061,2.35e-35,98;UBERON:0002193,7.95e-32,108;UBERON:0002405,4.99e-27,93;UBERON:0002371,2.76e-26,76;UBERON:0001474,3.42e-24,82;UBERON:0004765,7.87e-22,90;UBERON:0001434,2.11e-19,100;UBERON:0003081,1.67e-15,203;UBERON:0002106,2.12e-12,3;UBERON:0004854,2.12e-12,3;UBERON:0009034,2.12e-12,3;UBERON:0002095,2.12e-12,3;UBERON:0004782,2.12e-12,3;UBERON:0003281,2.12e-12,3;UBERON:0009664,2.12e-12,3;UBERON:0002296,2.12e-12,3;UBERON:0005602,2.12e-12,3;UBERON:0001179,2.12e-12,3;UBERON:0006293,2.12e-12,3;UBERON:0002204,1.45e-10,167;UBERON:0000926,8.39e-09,315;UBERON:0004120,8.39e-09,315;UBERON:0006603,8.39e-09,315 | |||
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| ||
|short_description=p12@FYB | |short_description=p12@FYB | ||
}} | }} |
Latest revision as of 21:03, 17 September 2015
Short description: | p12@FYB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_FYB_5end |
Coexpression cluster: | C294_CD14_Macrophage_Monocytederived_CD14CD16_Neutrophils_Basophils_Peripheral |
Association with transcript: | -25bp_to_ENST00000510188_5end |
EntrezGene: | FYB |
HGNC: | 4036 |
UniProt: | D6RFJ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.68e-36 | 72 |
monopoietic cell | 1.76e-34 | 59 |
monocyte | 1.76e-34 | 59 |
monoblast | 1.76e-34 | 59 |
promonocyte | 1.76e-34 | 59 |
macrophage dendritic cell progenitor | 2.77e-33 | 61 |
myeloid lineage restricted progenitor cell | 1.33e-30 | 66 |
granulocyte monocyte progenitor cell | 4.08e-30 | 67 |
adult endothelial progenitor cell | 2.50e-27 | 3 |
defensive cell | 3.84e-24 | 48 |
phagocyte | 3.84e-24 | 48 |
intermediate monocyte | 5.23e-24 | 9 |
CD14-positive, CD16-positive monocyte | 5.23e-24 | 9 |
myeloid cell | 4.84e-23 | 108 |
common myeloid progenitor | 4.84e-23 | 108 |
leukocyte | 1.01e-17 | 136 |
nongranular leukocyte | 1.53e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 9.59e-16 | 120 |
classical monocyte | 2.21e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.21e-15 | 42 |
hematopoietic oligopotent progenitor cell | 1.60e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-14 | 161 |
macrophage | 4.13e-14 | 6 |
hematopoietic stem cell | 8.57e-14 | 168 |
neutrophil | 5.85e-13 | 3 |
hematopoietic cell | 6.10e-13 | 177 |
non-classical monocyte | 2.12e-12 | 3 |
CD14-low, CD16-positive monocyte | 2.12e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.35e-35 | 98 |
blood island | 2.35e-35 | 98 |
hemolymphoid system | 7.95e-32 | 108 |
immune system | 4.99e-27 | 93 |
bone marrow | 2.76e-26 | 76 |
bone element | 3.42e-24 | 82 |
skeletal element | 7.87e-22 | 90 |
skeletal system | 2.11e-19 | 100 |
lateral plate mesoderm | 1.67e-15 | 203 |
spleen | 2.12e-12 | 3 |
gastrointestinal system mesentery | 2.12e-12 | 3 |
stomach region | 2.12e-12 | 3 |
mesentery | 2.12e-12 | 3 |
gastrointestinal system serosa | 2.12e-12 | 3 |
mesentery of stomach | 2.12e-12 | 3 |
gut mesentery | 2.12e-12 | 3 |
dorsal mesentery | 2.12e-12 | 3 |
dorsal mesogastrium | 2.12e-12 | 3 |
peritoneal cavity | 2.12e-12 | 3 |
spleen primordium | 2.12e-12 | 3 |
musculoskeletal system | 1.45e-10 | 167 |
mesoderm | 8.39e-09 | 315 |
mesoderm-derived structure | 8.39e-09 | 315 |
presumptive mesoderm | 8.39e-09 | 315 |