FFCP PHASE1:Hg19::chr1:158324697..158324709,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=913 | |EntrezGene=913 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1638 | |HGNC=1638 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-133bp_to_AK310567_5end | |association_with_transcript=-133bp_to_AK310567_5end | ||
|cluster_id=chr1:158324697..158324709,+ | |||
|coexpression_cluster_id=C28 | |coexpression_cluster_id=C28 | ||
|description=CAGE_peak_8_at_CD1E_5end | |description=CAGE_peak_8_at_CD1E_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000840!1.61e-27!5;CL:0001029!1.61e-27!5;CL:0000990!1.32e-18!8;CL:0000451!2.37e-15!10 | |ontology_enrichment_celltype=CL:0000840!1.61e-27!5;CL:0001029!1.61e-27!5;CL:0000990!1.32e-18!8;CL:0000451!2.37e-15!10 | ||
|ontology_enrichment_celltype_v019=CL:0000084;2.46e-07;25 | |ontology_enrichment_celltype_v019=CL:0000084;2.46e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.43e-07,25;CL:0000827,2.43e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006965;6.30e-21;2!UBERON:0004872;6.21e-07;7 | |ontology_enrichment_development_v019=UBERON:0006965;6.30e-21;2!UBERON:0004872;6.21e-07;7 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!6.12e-24!7;UBERON:0002370!2.26e-19!4;UBERON:0005058!2.26e-19!4;UBERON:0009113!2.26e-19!4;UBERON:0003295!2.26e-19!4;UBERON:0005562!2.26e-19!4;UBERON:0000974!5.26e-17!10;UBERON:0003351!2.95e-13!6;UBERON:0000341!3.27e-10!2;UBERON:0003408!2.53e-08!10;UBERON:0001042!2.53e-08!10;UBERON:0009145!2.53e-08!10;UBERON:0002390!3.00e-08!102;UBERON:0003061!3.00e-08!102;UBERON:0006562!1.20e-07!11;UBERON:0009722!1.20e-07!11;UBERON:0007690!1.20e-07!11;UBERON:0002193!1.75e-07!112;UBERON:0002106!3.35e-07!3;UBERON:0004854!3.35e-07!3;UBERON:0009034!3.35e-07!3;UBERON:0002095!3.35e-07!3;UBERON:0004782!3.35e-07!3;UBERON:0003281!3.35e-07!3;UBERON:0009664!3.35e-07!3;UBERON:0002296!3.35e-07!3;UBERON:0005602!3.35e-07!3;UBERON:0001179!3.35e-07!3;UBERON:0006293!3.35e-07!3;UBERON:0005057!6.70e-07!26 | |ontology_enrichment_uberon=UBERON:0004177!6.12e-24!7;UBERON:0002370!2.26e-19!4;UBERON:0005058!2.26e-19!4;UBERON:0009113!2.26e-19!4;UBERON:0003295!2.26e-19!4;UBERON:0005562!2.26e-19!4;UBERON:0000974!5.26e-17!10;UBERON:0003351!2.95e-13!6;UBERON:0000341!3.27e-10!2;UBERON:0003408!2.53e-08!10;UBERON:0001042!2.53e-08!10;UBERON:0009145!2.53e-08!10;UBERON:0002390!3.00e-08!102;UBERON:0003061!3.00e-08!102;UBERON:0006562!1.20e-07!11;UBERON:0009722!1.20e-07!11;UBERON:0007690!1.20e-07!11;UBERON:0002193!1.75e-07!112;UBERON:0002106!3.35e-07!3;UBERON:0004854!3.35e-07!3;UBERON:0009034!3.35e-07!3;UBERON:0002095!3.35e-07!3;UBERON:0004782!3.35e-07!3;UBERON:0003281!3.35e-07!3;UBERON:0009664!3.35e-07!3;UBERON:0002296!3.35e-07!3;UBERON:0005602!3.35e-07!3;UBERON:0001179!3.35e-07!3;UBERON:0006293!3.35e-07!3;UBERON:0005057!6.70e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.05e-79;2!UBERON:0005058;1.05e-79;2!UBERON:0009113;1.05e-79;2!UBERON:0004177;1.05e-32;5!UBERON:0005057;1.05e-32;5!UBERON:0000077;6.43e-07;27!UBERON:0002405;6.43e-07;27 | |ontology_enrichment_uberon_v019=UBERON:0002370;1.05e-79;2!UBERON:0005058;1.05e-79;2!UBERON:0009113;1.05e-79;2!UBERON:0004177;1.05e-32;5!UBERON:0005057;1.05e-32;5!UBERON:0000077;6.43e-07;27!UBERON:0002405;6.43e-07;27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.48e-40,4;UBERON:0005058,1.48e-40,4;UBERON:0009113,1.48e-40,4;UBERON:0003295,1.48e-40,4;UBERON:0005562,1.48e-40,4;UBERON:0003351,1.82e-27,6;UBERON:0004177,1.02e-23,7;UBERON:0005057,1.02e-23,7;UBERON:0000974,5.90e-17,10;UBERON:0003408,5.90e-17,10;UBERON:0001042,5.90e-17,10;UBERON:0009145,5.90e-17,10;UBERON:0006562,1.62e-15,11;UBERON:0009722,1.62e-15,11;UBERON:0007690,1.62e-15,11;UBERON:0008814,6.79e-10,18;UBERON:0001557,1.99e-09,19 | |||
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|short_description=p8@CD1E | |short_description=p8@CD1E | ||
}} | }} |
Latest revision as of 21:07, 17 September 2015
Short description: | p8@CD1E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CD1E_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | -133bp_to_AK310567_5end |
EntrezGene: | CD1E |
HGNC: | 1638 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.43e-07 | 25 |
pro-T cell | 2.43e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.48e-40 | 4 |
hemolymphoid system gland | 1.48e-40 | 4 |
thymic region | 1.48e-40 | 4 |
pharyngeal gland | 1.48e-40 | 4 |
thymus primordium | 1.48e-40 | 4 |
pharyngeal epithelium | 1.82e-27 | 6 |
hemopoietic organ | 1.02e-23 | 7 |
immune organ | 1.02e-23 | 7 |
neck | 5.90e-17 | 10 |
gland of gut | 5.90e-17 | 10 |
chordate pharynx | 5.90e-17 | 10 |
pharyngeal region of foregut | 5.90e-17 | 10 |
pharynx | 1.62e-15 | 11 |
entire pharyngeal arch endoderm | 1.62e-15 | 11 |
early pharyngeal endoderm | 1.62e-15 | 11 |
pharyngeal arch system | 6.79e-10 | 18 |
upper respiratory tract | 1.99e-09 | 19 |