FFCP PHASE1:Hg19::chr2:162929965..162930004,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:162929965..162930004,- to FFCP PHASE1:Hg19::chr2:162929965..162930004,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1803 | |EntrezGene=1803 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3009 | |HGNC=3009 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000461836,ENST00000490286,uc002uca.1,uc002ucb.1_5end | |||
|cluster_id=chr2:162929965..162930004,- | |||
|coexpression_cluster_id=C1265 | |||
|description=CAGE_peak_11_at_DPP4_5end | |||
|id=chr2:162929965..162930004,- | |||
|ontology_enrichment_celltype=CL:0000680!2.93e-13!57;CL:0000056!2.93e-13!57;CL:0000355!2.93e-13!57;CL:0000187!2.43e-11!54;CL:0000222!3.46e-11!119;CL:0000183!6.28e-10!59;CL:0000393!5.39e-09!60;CL:0000211!5.39e-09!60;CL:0000055!8.13e-09!180;CL:0000192!4.74e-08!42;CL:0000514!4.74e-08!42 | |||
|ontology_enrichment_celltype_v019=CL:0000515;1.43e-09;3!CL:0000134;2.46e-09;55!CL:0000048;3.30e-09;58!CL:0002504;8.85e-09;3!CL:1000279;8.85e-09;3!CL:1000280;8.85e-09;3!CL:0000723;3.52e-08;61!CL:0000569;8.47e-08;4!CL:1000306;1.63e-07;4!CL:0002547;1.63e-07;4!CL:0000056;2.87e-07;4!CL:0000680;8.13e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,6.19e-09,3;CL:1000279,6.19e-09,3;CL:1000280,6.19e-09,3;CL:0000680,1.40e-08,58;CL:0000056,1.40e-08,58;CL:0000355,1.40e-08,58;CL:0000569,8.24e-08,4;CL:0000011,8.24e-08,4;CL:1000306,1.05e-07,4;CL:0002547,1.05e-07,4;CL:0000222,1.59e-07,121;CL:0000515,3.08e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000011;8.47e-08;4!CL:0000515;2.87e-07;4 | |||
|ontology_enrichment_disease=DOID:2394!8.63e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.34e-20;14!DOID:120;3.21e-11;27!DOID:193;2.81e-10;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.06e-20,14;DOID:120,3.16e-11,27;DOID:193,2.78e-10,29 | |||
|ontology_enrichment_uberon=UBERON:0000490!1.10e-12!138;UBERON:0001134!2.11e-12!61;UBERON:0002036!2.11e-12!61;UBERON:0003082!2.11e-12!61;UBERON:0002385!2.11e-12!63;UBERON:0001015!2.11e-12!63;UBERON:0000383!2.11e-12!63;UBERON:0004290!3.39e-11!70;UBERON:0004872!1.02e-09!84;UBERON:0000486!5.80e-09!82;UBERON:0000914!9.85e-09!83;UBERON:0002329!9.85e-09!83;UBERON:0003077!9.85e-09!83;UBERON:0003059!9.85e-09!83;UBERON:0007282!9.85e-09!83;UBERON:0009618!9.85e-09!83;UBERON:0007285!9.85e-09!83;UBERON:0000483!2.14e-08!309;UBERON:0000119!5.08e-08!312;UBERON:0005256!6.64e-08!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0002118;6.15e-15;5!UBERON:0000992;1.19e-13;13!UBERON:0000991;2.25e-12;21!UBERON:0002385;4.18e-12;31!UBERON:0001015;4.18e-12;31!UBERON:0000383;4.18e-12;31!UBERON:0001135;2.99e-08;15!UBERON:0004797;1.63e-07;4!UBERON:0000415;1.63e-07;4!UBERON:0007240;1.63e-07;4!UBERON:0005742;1.63e-07;4!UBERON:0005734;1.63e-07;4!UBERON:0004664;1.63e-07;4!UBERON:0002119;1.63e-07;4!UBERON:0004663;1.63e-07;4!UBERON:0005904;1.82e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,4.51e-15,5;UBERON:0000992,9.79e-14,13;UBERON:0000991,1.62e-12,21;UBERON:0009196,1.62e-12,21;UBERON:0009117,1.62e-12,21;UBERON:0005564,1.62e-12,21;UBERON:0004176,7.52e-12,22;UBERON:0000926,1.26e-08,315;UBERON:0004120,1.26e-08,315;UBERON:0006603,1.26e-08,315;UBERON:0001135,2.90e-08,15;UBERON:0001134,8.51e-08,62;UBERON:0002036,8.51e-08,62;UBERON:0003082,8.51e-08,62;UBERON:0000415,1.05e-07,4;UBERON:0007240,1.05e-07,4;UBERON:0005742,1.05e-07,4;UBERON:0005734,1.05e-07,4;UBERON:0004664,1.05e-07,4;UBERON:0004663,1.05e-07,4;UBERON:0005904,1.44e-07,4;UBERON:0002119,1.60e-07,4;UBERON:0002385,1.92e-07,64;UBERON:0001015,1.92e-07,64;UBERON:0000383,1.92e-07,64;UBERON:0002329,2.68e-07,71;UBERON:0003059,2.68e-07,71;UBERON:0007282,2.68e-07,71;UBERON:0004290,2.68e-07,71;UBERON:0009618,2.68e-07,71;UBERON:0003077,3.81e-07,72;UBERON:0007285,3.81e-07,72;UBERON:0007524,5.36e-07,73 | |||
|phase1_expression=0,0,0.281908808191942,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0.263766978228454,0.37129905888014,0,2.01697543935533,1.80808358407193,2.19093027116212,0.975865597581014,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0.501559486172034,0,0,0,0.222820913770347,0,0,0,0.512365278902701,0.520237390239513,2.63100647365882,2.76350017785848,0.869409257205157,0.296573126324121,0,0,0.679856056185397,0,0,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0.383959833463255,1.24930726552346,0.236777252044017,0,0.201606743224732,0.267440195783507,0,0,0.670700859703636,0.639312809217652,0,0,0,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52054421143703,0.24406205754817,0.735326160691737,0,0.892997282840798,0.22452937262617,0.225222960966644,0,0,0,0,0,0,1.49091585508596,0.759783069987479,30.85133912948,3.72887606973458,1.77334191099179,0,0,0.24666754841716,1.24484414159907,0.404132016209064,1.14423332179421,0,0,0,0,1.1409436430889,0.747243402759005,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,1.48352330811693,1.20036438433761,0.92747276314595,0.772921620136887,0,0.675105328965065,0.0974370051611986,0.252433774244115,0.736399189138395,0.484938170456436,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0.171567810298526,0,0,0.100528972411631,0,0,0,2.88662684050547,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0.576479813667846,0.37872730027914,0.698476837213859,0.381988425558278,0,0,0.102827492703324,0.901029173531752,0.857479297891735,0,0,0,1.29271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0,0.285955987316295,0.542621605391443,0,0.977208552881205,0.710783897485092,0,19.8949988859327,3.48613383440118,8.09781228574662,0,0,0,0,0,0,1.30303176000821,3.08214483825575,2.32779252211864,0.560425719967636,0.394061520403854,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,2.95404289191482,0.195801157462741,0,0.206768026122887,0,0.106727557803444,0,0,0.604780586659361,0.496215615637554,0.153461973288062,0,0.640695746278505,0.511707249066704,0,0,0.154209693802656,1.24293207719189,1.23190734020714,1.03850885836724,0.813472649219715,0.725156697549733,0,0,0.803701137152247,0.728364672026868,1.31124414959424,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0.328014645699706,0,0.618246069886334,0,0,0,0,6.42735719376638,0.193341436584244,1.23238893691716,1.22802939780904,0.137836572484531,0.644521469209642,0.290033387828457,1.19317278382541,0.445160178233687,0,0,0,0,0,0.62962469366128,0.6970372701606,0,1.06461206063404,0,0,0,0,0.316379424718726,1.5250415513906,0.255897791311334,0,0.636406495851874,0,1.97859703341646,1.09814811894422,1.41374882814824,0.404364963146632,0,1.26377536871694,0,3.65570234446927,0,0.136499911407986,0.989838023675989,0,0,0.66343897524122,0.438450885253763,0,0.655894752046633,0.405820753925408,0.30982349809975,0.563391205064483,0.286822704408103,0.0982490410131212,0.35667105148125,0,1.26664581178598,0.987884678879706,0,0.349934720244983,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,3.56187856073299,0.659215496907038,0,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0.197286811273867,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0.421996129056054,0,0.565412285735763,0,0,0.265372693510018,1.22206028986725,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,3.15667522279512,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,1.13843818411917,0,0,0,0,0.698906672968121,0,0,0,0,0,0,0.451961481561065,0,0,0.379864775735272,0,0,0.213452994739353,0.19980960958213,0,0.114536596165916,0,0,0,0,0,0,0,0.866851769704557,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0.335917362433631,0.360299883542404,0,0.236349546921671,0.329663433524666,0.202210631562555,0.196854963029498,0.0846733320657845,0,0,0,0,0,0,0,0.121499113316049,0,0.157611414598396,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0.106787412567695,0.78602152549833,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0.751145584238999,0,0,0,0,0,0,0,0,0,0,0.74627401443437,5.14169281663894,6.65767033803136,0.189403005275089,2.0125432140206,5.33886732957922,2.74608082076308,8.46893173074139,0.310874401165561,5.91420599958536,2.23015474029183,3.59842489730884,2.79473322377267,0.829412415681711,0,0,3.60618261593324,6.47368860686952,2.44122439922797,1.45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| 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| ||
|short_description=p11@DPP4 | |||
}} | }} |
Latest revision as of 21:20, 17 September 2015
Short description: | p11@DPP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_DPP4_5end |
Coexpression cluster: | C1265_Fibroblast_Mesothelial_mesenchymal_anaplastic_CD4_Sertoli_Smooth |
Association with transcript: | 0bp_to_ENST00000461836, ENST00000490286, uc002uca.1, uc002ucb.1_5end |
EntrezGene: | DPP4 |
HGNC: | 3009 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 6.19e-09 | 3 |
smooth muscle cell of large intestine | 6.19e-09 | 3 |
smooth muscle cell of colon | 6.19e-09 | 3 |
muscle precursor cell | 1.40e-08 | 58 |
myoblast | 1.40e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.40e-08 | 58 |
cardiac mesenchymal cell | 8.24e-08 | 4 |
migratory trunk neural crest cell | 8.24e-08 | 4 |
fibroblast of tunica adventitia of artery | 1.05e-07 | 4 |
fibroblast of the aortic adventitia | 1.05e-07 | 4 |
mesodermal cell | 1.59e-07 | 121 |
skeletal muscle myoblast | 3.08e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
right ovary | 4.51e-15 | 5 |
female gonad | 9.79e-14 | 13 |
gonad | 1.62e-12 | 21 |
indifferent external genitalia | 1.62e-12 | 21 |
indifferent gonad | 1.62e-12 | 21 |
gonad primordium | 1.62e-12 | 21 |
external genitalia | 7.52e-12 | 22 |
mesoderm | 1.26e-08 | 315 |
mesoderm-derived structure | 1.26e-08 | 315 |
presumptive mesoderm | 1.26e-08 | 315 |
smooth muscle tissue | 2.90e-08 | 15 |
skeletal muscle tissue | 8.51e-08 | 62 |
striated muscle tissue | 8.51e-08 | 62 |
myotome | 8.51e-08 | 62 |
artery wall | 1.05e-07 | 4 |
tunica adventitia of artery | 1.05e-07 | 4 |
adventitia | 1.05e-07 | 4 |
tunica adventitia of blood vessel | 1.05e-07 | 4 |
aorta tunica adventitia | 1.05e-07 | 4 |
aorta wall | 1.05e-07 | 4 |
duct of male reproductive system | 1.44e-07 | 4 |
left ovary | 1.60e-07 | 4 |
muscle tissue | 1.92e-07 | 64 |
musculature | 1.92e-07 | 64 |
musculature of body | 1.92e-07 | 64 |
somite | 2.68e-07 | 71 |
presomitic mesoderm | 2.68e-07 | 71 |
presumptive segmental plate | 2.68e-07 | 71 |
dermomyotome | 2.68e-07 | 71 |
trunk paraxial mesoderm | 2.68e-07 | 71 |
paraxial mesoderm | 3.81e-07 | 72 |
presumptive paraxial mesoderm | 3.81e-07 | 72 |
dense mesenchyme tissue | 5.36e-07 | 73 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.06e-20 | 14 |
female reproductive organ cancer | 3.16e-11 | 27 |
reproductive organ cancer | 2.78e-10 | 29 |