FFCP PHASE1:Hg19::chr4:46126009..46126045,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2565 | |EntrezGene=2565 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4086 | |HGNC=4086 | ||
|TSSclassifier=strong | |||
|UniProt=F5H2S0,Q8N1C3 | |UniProt=F5H2S0,Q8N1C3 | ||
|association_with_transcript=36bp_to_ENST00000540030,NM_173536,uc003gxb.2_5end | |association_with_transcript=36bp_to_ENST00000540030,NM_173536,uc003gxb.2_5end | ||
|cluster_id=chr4:46126009..46126045,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_GABRG1_5end | |description=CAGE_peak_1_at_GABRG1_5end | ||
|id=chr4:46126009..46126045,- | |id=chr4:46126009..46126045,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.53e-26;82!UBERON:0006241;9.66e-11;3!UBERON:0003057;9.66e-11;3!UBERON:0006215;1.05e-10;3!UBERON:0010122;2.60e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.08e-81!57;UBERON:0005068!1.08e-81!57;UBERON:0006241!1.08e-81!57;UBERON:0007135!1.08e-81!57;UBERON:0007023!3.20e-73!115;UBERON:0002616!3.83e-68!59;UBERON:0001017!1.39e-66!82;UBERON:0005743!3.16e-65!86;UBERON:0002780!1.33e-64!41;UBERON:0001890!1.33e-64!41;UBERON:0006240!1.33e-64!41;UBERON:0000955!1.34e-63!69;UBERON:0006238!1.34e-63!69;UBERON:0003080!8.41e-63!42;UBERON:0000073!8.20e-60!94;UBERON:0001016!8.20e-60!94;UBERON:0003075!3.93e-58!86;UBERON:0007284!3.93e-58!86;UBERON:0002346!7.94e-55!90;UBERON:0002020!2.99e-52!34;UBERON:0003528!2.99e-52!34;UBERON:0001893!8.68e-52!34;UBERON:0002791!5.54e-50!33;UBERON:0001869!4.49e-48!32;UBERON:0003056!3.87e-44!61;UBERON:0002619!3.32e-40!22;UBERON:0000153!1.68e-38!129;UBERON:0007811!1.68e-38!129;UBERON:0001950!4.07e-36!20;UBERON:0000033!3.95e-35!123;UBERON:0000956!9.95e-35!25;UBERON:0000203!9.95e-35!25;UBERON:0004121!3.92e-27!169;UBERON:0000924!4.00e-26!173;UBERON:0006601!4.00e-26!173;UBERON:0000025!2.56e-21!194;UBERON:0002308!3.84e-19!9;UBERON:0000125!3.84e-19!9;UBERON:0003076!4.64e-19!15;UBERON:0003057!4.64e-19!15;UBERON:0002420!5.56e-19!9;UBERON:0007245!5.56e-19!9;UBERON:0010009!5.56e-19!9;UBERON:0010011!5.56e-19!9;UBERON:0000454!5.56e-19!9;UBERON:0004111!1.79e-15!241;UBERON:0004732!2.78e-15!13;UBERON:0009663!4.34e-15!7;UBERON:0001894!5.63e-14!7;UBERON:0006222!5.63e-14!7;UBERON:0004733!9.86e-14!12;UBERON:0002028!9.86e-14!12;UBERON:0007277!9.86e-14!12;UBERON:0000477!1.05e-13!286;UBERON:0002298!3.40e-13!8;UBERON:0001871!7.57e-13!7;UBERON:0000200!7.91e-13!6;UBERON:0000483!4.84e-12!309;UBERON:0000119!9.18e-12!312;UBERON:0000349!1.78e-11!5;UBERON:0000475!8.46e-11!365;UBERON:0001872!1.32e-10!5;UBERON:0002021!1.81e-10!5;UBERON:0000064!2.42e-10!219;UBERON:0000062!8.33e-10!511;UBERON:0000369!1.19e-09!4;UBERON:0002435!1.19e-09!4;UBERON:0000204!1.19e-09!4;UBERON:0010082!1.19e-09!4;UBERON:0000481!7.90e-09!347;UBERON:0002680!2.17e-08!9;UBERON:0001895!2.17e-08!9;UBERON:0010092!2.17e-08!9;UBERON:0003296!3.54e-08!4;UBERON:0010133!3.54e-08!4;UBERON:0005383!8.44e-08!3;UBERON:0005382!8.44e-08!3;UBERON:0001896!1.16e-07!3;UBERON:0005290!1.16e-07!3;UBERON:0010096!1.16e-07!3;UBERON:0002771!1.35e-07!3;UBERON:0006331!1.44e-07!3;UBERON:0000988!1.85e-07!3;UBERON:0002240!2.70e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!1.08e-81!57;UBERON:0005068!1.08e-81!57;UBERON:0006241!1.08e-81!57;UBERON:0007135!1.08e-81!57;UBERON:0007023!3.20e-73!115;UBERON:0002616!3.83e-68!59;UBERON:0001017!1.39e-66!82;UBERON:0005743!3.16e-65!86;UBERON:0002780!1.33e-64!41;UBERON:0001890!1.33e-64!41;UBERON:0006240!1.33e-64!41;UBERON:0000955!1.34e-63!69;UBERON:0006238!1.34e-63!69;UBERON:0003080!8.41e-63!42;UBERON:0000073!8.20e-60!94;UBERON:0001016!8.20e-60!94;UBERON:0003075!3.93e-58!86;UBERON:0007284!3.93e-58!86;UBERON:0002346!7.94e-55!90;UBERON:0002020!2.99e-52!34;UBERON:0003528!2.99e-52!34;UBERON:0001893!8.68e-52!34;UBERON:0002791!5.54e-50!33;UBERON:0001869!4.49e-48!32;UBERON:0003056!3.87e-44!61;UBERON:0002619!3.32e-40!22;UBERON:0000153!1.68e-38!129;UBERON:0007811!1.68e-38!129;UBERON:0001950!4.07e-36!20;UBERON:0000033!3.95e-35!123;UBERON:0000956!9.95e-35!25;UBERON:0000203!9.95e-35!25;UBERON:0004121!3.92e-27!169;UBERON:0000924!4.00e-26!173;UBERON:0006601!4.00e-26!173;UBERON:0000025!2.56e-21!194;UBERON:0002308!3.84e-19!9;UBERON:0000125!3.84e-19!9;UBERON:0003076!4.64e-19!15;UBERON:0003057!4.64e-19!15;UBERON:0002420!5.56e-19!9;UBERON:0007245!5.56e-19!9;UBERON:0010009!5.56e-19!9;UBERON:0010011!5.56e-19!9;UBERON:0000454!5.56e-19!9;UBERON:0004111!1.79e-15!241;UBERON:0004732!2.78e-15!13;UBERON:0009663!4.34e-15!7;UBERON:0001894!5.63e-14!7;UBERON:0006222!5.63e-14!7;UBERON:0004733!9.86e-14!12;UBERON:0002028!9.86e-14!12;UBERON:0007277!9.86e-14!12;UBERON:0000477!1.05e-13!286;UBERON:0002298!3.40e-13!8;UBERON:0001871!7.57e-13!7;UBERON:0000200!7.91e-13!6;UBERON:0000483!4.84e-12!309;UBERON:0000119!9.18e-12!312;UBERON:0000349!1.78e-11!5;UBERON:0000475!8.46e-11!365;UBERON:0001872!1.32e-10!5;UBERON:0002021!1.81e-10!5;UBERON:0000064!2.42e-10!219;UBERON:0000062!8.33e-10!511;UBERON:0000369!1.19e-09!4;UBERON:0002435!1.19e-09!4;UBERON:0000204!1.19e-09!4;UBERON:0010082!1.19e-09!4;UBERON:0000481!7.90e-09!347;UBERON:0002680!2.17e-08!9;UBERON:0001895!2.17e-08!9;UBERON:0010092!2.17e-08!9;UBERON:0003296!3.54e-08!4;UBERON:0010133!3.54e-08!4;UBERON:0005383!8.44e-08!3;UBERON:0005382!8.44e-08!3;UBERON:0001896!1.16e-07!3;UBERON:0005290!1.16e-07!3;UBERON:0010096!1.16e-07!3;UBERON:0002771!1.35e-07!3;UBERON:0006331!1.44e-07!3;UBERON:0000988!1.85e-07!3;UBERON:0002240!2.70e-07!3 | ||
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|short_description=p1@GABRG1 | |short_description=p1@GABRG1 | ||
}} | }} |
Latest revision as of 21:22, 17 September 2015
Short description: | p1@GABRG1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GABRG1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 36bp_to_ENST00000540030, NM_173536, uc003gxb.2_5end |
EntrezGene: | GABRG1 |
HGNC: | 4086 |
UniProt: | F5H2S0Q8N1C3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data