FFCP PHASE1:Hg19::chr1:36941215..36941226,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:36941215..36941226,-
|short_description=p8@CSF3R
|description=CAGE_peak_8_at_CSF3R_5end
|association_with_transcript=-202bp_to_ENST00000464365_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1441 | |EntrezGene=1441 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2439 | |HGNC=2439 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-202bp_to_ENST00000464365_5end | |||
|cluster_id=chr1:36941215..36941226,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_8_at_CSF3R_5end | |||
|id=chr1:36941215..36941226,- | |||
|ontology_enrichment_celltype=CL:0002057!2.52e-73!42;CL:0000860!1.47e-67!45;CL:0000766!2.38e-62!76;CL:0002194!1.01e-61!63;CL:0000576!1.01e-61!63;CL:0000040!1.01e-61!63;CL:0000559!1.01e-61!63;CL:0002009!2.11e-59!65;CL:0000839!3.53e-54!70;CL:0000557!3.20e-53!71;CL:0000763!4.58e-48!112;CL:0000049!4.58e-48!112;CL:0000738!7.52e-34!140;CL:0002087!1.51e-33!119;CL:0000037!4.66e-33!172;CL:0000566!4.66e-33!172;CL:0000988!2.88e-30!182;CL:0002032!9.77e-30!165;CL:0000837!9.77e-30!165;CL:0002031!3.57e-27!124;CL:0002393!3.76e-10!9;CL:0002397!3.76e-10!9;CL:0000134!2.89e-08!358;CL:0000775!3.65e-08!3;CL:0002320!8.16e-08!365;CL:0000094!5.03e-07!8;CL:0000842!8.76e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.44e-84;33!CL:0002057;8.44e-84;33!CL:0000473;2.06e-65;39!CL:0000234;2.06e-65;39!CL:0000576;2.68e-44;48!CL:0000766;1.64e-34;69!CL:0000763;1.92e-17;100!CL:0000775;1.67e-15;3!CL:0002087;2.65e-11;104!CL:0000738;1.22e-10;136!CL:0000094;5.96e-10;8!CL:0000081;3.10e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.80e-83,42;CL:0002057,5.80e-83,42;CL:0000473,3.36e-77,48;CL:0000234,3.36e-77,48;CL:0000766,2.38e-64,72;CL:0002194,2.15e-60,59;CL:0000576,2.15e-60,59;CL:0000040,2.15e-60,59;CL:0000559,2.15e-60,59;CL:0002009,3.18e-58,61;CL:0000839,2.28e-53,66;CL:0000557,1.76e-52,67;CL:0000763,1.25e-40,108;CL:0000049,1.25e-40,108;CL:0000738,5.40e-33,136;CL:0002087,3.56e-30,115;CL:0002031,1.73e-26,120;CL:0000037,2.69e-25,168;CL:0002032,7.05e-25,161;CL:0000837,7.05e-25,161;CL:0000988,1.25e-23,177;CL:0000775,1.68e-15,3;CL:0000094,5.53e-10,8;CL:0000134,4.79e-08,354;CL:0002320,9.57e-08,361;CL:0000081,2.94e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;6.35e-62;42!CL:0000049;2.53e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.67e-61!102;UBERON:0003061!1.67e-61!102;UBERON:0002193!1.25e-56!112;UBERON:0002371!7.45e-48!80;UBERON:0001474!1.57e-43!86;UBERON:0002405!2.55e-38!115;UBERON:0004765!5.64e-35!101;UBERON:0001434!5.64e-35!101;UBERON:0003081!6.81e-25!216;UBERON:0002204!8.73e-16!167;UBERON:0000178!7.69e-13!15;UBERON:0000179!7.69e-13!15;UBERON:0000463!7.69e-13!15;UBERON:0002384!1.21e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.13e-18;15!UBERON:0000179;4.13e-18;15!UBERON:0000463;4.13e-18;15!UBERON:0002390;1.84e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.60e-58,98;UBERON:0003061,9.60e-58,98;UBERON:0002193,1.01e-51,108;UBERON:0002371,1.51e-45,76;UBERON:0001474,9.31e-42,82;UBERON:0004765,1.75e-37,90;UBERON:0002405,4.56e-36,93;UBERON:0001434,4.31e-33,100;UBERON:0003081,6.28e-24,203;UBERON:0000178,3.66e-18,15;UBERON:0000179,3.66e-18,15;UBERON:0000463,3.66e-18,15;UBERON:0002204,3.61e-17,167;UBERON:0000926,1.36e-12,315;UBERON:0004120,1.36e-12,315;UBERON:0006603,1.36e-12,315;UBERON:0002384,2.46e-07,371 | |||
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| ||
|short_description=p8@CSF3R | |||
}} | }} |
Latest revision as of 21:26, 17 September 2015
Short description: | p8@CSF3R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CSF3R_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -202bp_to_ENST00000464365_5end |
EntrezGene: | CSF3R |
HGNC: | 2439 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.80e-83 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.80e-83 | 42 |
defensive cell | 3.36e-77 | 48 |
phagocyte | 3.36e-77 | 48 |
myeloid leukocyte | 2.38e-64 | 72 |
monopoietic cell | 2.15e-60 | 59 |
monocyte | 2.15e-60 | 59 |
monoblast | 2.15e-60 | 59 |
promonocyte | 2.15e-60 | 59 |
macrophage dendritic cell progenitor | 3.18e-58 | 61 |
myeloid lineage restricted progenitor cell | 2.28e-53 | 66 |
granulocyte monocyte progenitor cell | 1.76e-52 | 67 |
myeloid cell | 1.25e-40 | 108 |
common myeloid progenitor | 1.25e-40 | 108 |
leukocyte | 5.40e-33 | 136 |
nongranular leukocyte | 3.56e-30 | 115 |
hematopoietic lineage restricted progenitor cell | 1.73e-26 | 120 |
hematopoietic stem cell | 2.69e-25 | 168 |
hematopoietic oligopotent progenitor cell | 7.05e-25 | 161 |
hematopoietic multipotent progenitor cell | 7.05e-25 | 161 |
hematopoietic cell | 1.25e-23 | 177 |
neutrophil | 1.68e-15 | 3 |
granulocyte | 5.53e-10 | 8 |
mesenchymal cell | 4.79e-08 | 354 |
connective tissue cell | 9.57e-08 | 361 |
blood cell | 2.94e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.60e-58 | 98 |
blood island | 9.60e-58 | 98 |
hemolymphoid system | 1.01e-51 | 108 |
bone marrow | 1.51e-45 | 76 |
bone element | 9.31e-42 | 82 |
skeletal element | 1.75e-37 | 90 |
immune system | 4.56e-36 | 93 |
skeletal system | 4.31e-33 | 100 |
lateral plate mesoderm | 6.28e-24 | 203 |
blood | 3.66e-18 | 15 |
haemolymphatic fluid | 3.66e-18 | 15 |
organism substance | 3.66e-18 | 15 |
musculoskeletal system | 3.61e-17 | 167 |
mesoderm | 1.36e-12 | 315 |
mesoderm-derived structure | 1.36e-12 | 315 |
presumptive mesoderm | 1.36e-12 | 315 |
connective tissue | 2.46e-07 | 371 |