FFCP PHASE1:Hg19::chr1:158815444..158815459,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4332 | |EntrezGene=4332 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7183 | |HGNC=7183 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-231bp_to_ENST00000438394_5end | |association_with_transcript=-231bp_to_ENST00000438394_5end | ||
|cluster_id=chr1:158815444..158815459,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_8_at_MNDA_5end | |description=CAGE_peak_8_at_MNDA_5end | ||
|id=chr1:158815444..158815459,+ | |id=chr1:158815444..158815459,+ | ||
|ontology_enrichment_celltype=CL:0002057!8.91e-62!42;CL:0002194!1.11e-58!63;CL:0000576!1.11e-58!63;CL:0000040!1.11e-58!63;CL:0000559!1.11e-58!63;CL:0000766!4.58e-58!76;CL:0000860!6.16e-57!45;CL:0002009!1.63e-56!65;CL:0000839!1.25e-51!70;CL:0000557!9.84e-51!71;CL:0000763!6.08e-49!112;CL:0000049!6.08e-49!112;CL:0000738!7.00e-39!140;CL:0002087!4.56e-38!119;CL:0000037!9.40e-38!172;CL:0000566!9.40e-38!172;CL:0002032!6.41e-37!165;CL:0000837!6.41e-37!165;CL:0000988!8.74e-35!182;CL:0002031!3.91e-31!124;CL:0002393!1.27e-15!9;CL:0002397!1.27e-15!9;CL:0000134!5.69e-10!358;CL:0002320!1.69e-09!365;CL:0000775!4.72e-09!3;CL:0000219!7.54e-08!390;CL:0000875!3.19e-07!3;CL:0002396!3.19e-07!3 | |ontology_enrichment_celltype=CL:0002057!8.91e-62!42;CL:0002194!1.11e-58!63;CL:0000576!1.11e-58!63;CL:0000040!1.11e-58!63;CL:0000559!1.11e-58!63;CL:0000766!4.58e-58!76;CL:0000860!6.16e-57!45;CL:0002009!1.63e-56!65;CL:0000839!1.25e-51!70;CL:0000557!9.84e-51!71;CL:0000763!6.08e-49!112;CL:0000049!6.08e-49!112;CL:0000738!7.00e-39!140;CL:0002087!4.56e-38!119;CL:0000037!9.40e-38!172;CL:0000566!9.40e-38!172;CL:0002032!6.41e-37!165;CL:0000837!6.41e-37!165;CL:0000988!8.74e-35!182;CL:0002031!3.91e-31!124;CL:0002393!1.27e-15!9;CL:0002397!1.27e-15!9;CL:0000134!5.69e-10!358;CL:0002320!1.69e-09!365;CL:0000775!4.72e-09!3;CL:0000219!7.54e-08!390;CL:0000875!3.19e-07!3;CL:0002396!3.19e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.06e-33;33!CL:0002057;8.06e-33;33!CL:0000576;7.38e-31;48!CL:0000473;3.08e-28;39!CL:0000234;3.08e-28;39!CL:0000766;1.94e-24;69!CL:0000775;3.52e-19;3!CL:0000763;5.74e-15;100!CL:0000094;1.75e-12;8!CL:0000081;4.25e-09;11!CL:0002393;7.97e-09;6!CL:0002397;7.97e-09;6!CL:0000738;2.45e-07;136!CL:0000988;3.31e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.99e-44,72;CL:0000860,7.05e-40,42;CL:0002057,7.05e-40,42;CL:0000473,1.02e-38,48;CL:0000234,1.02e-38,48;CL:0002194,4.02e-37,59;CL:0000576,4.02e-37,59;CL:0000040,4.02e-37,59;CL:0000559,4.02e-37,59;CL:0000763,7.70e-36,108;CL:0000049,7.70e-36,108;CL:0002009,8.81e-36,61;CL:0000839,8.84e-33,66;CL:0000557,3.12e-32,67;CL:0002032,2.71e-22,161;CL:0000837,2.71e-22,161;CL:0000037,3.87e-21,168;CL:0000738,5.19e-21,136;CL:0000988,8.72e-20,177;CL:0000775,3.53e-19,3;CL:0002087,4.67e-17,115;CL:0002031,3.60e-16,120;CL:0000094,1.70e-12,8;CL:0000081,4.16e-09,11;CL:0000134,4.22e-07,354;CL:0002320,7.44e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;5.89e-29;42!CL:0000049;4.64e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.82e-59!102;UBERON:0003061!1.82e-59!102;UBERON:0002193!5.13e-55!112;UBERON:0002371!1.12e-43!80;UBERON:0001474!8.60e-40!86;UBERON:0002405!8.42e-33!115;UBERON:0004765!4.27e-32!101;UBERON:0001434!4.27e-32!101;UBERON:0003081!3.34e-22!216;UBERON:0002204!1.08e-15!167;UBERON:0000178!7.75e-15!15;UBERON:0000179!7.75e-15!15;UBERON:0000463!7.75e-15!15;UBERON:0002384!7.43e-09!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.16e-18;15!UBERON:0000179;3.16e-18;15!UBERON:0000463;3.16e-18;15!UBERON:0002390;1.41e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.34e-39,98;UBERON:0003061,1.34e-39,98;UBERON:0002193,1.84e-35,108;UBERON:0002371,6.03e-28,76;UBERON:0001474,1.32e-25,82;UBERON:0004765,5.80e-23,90;UBERON:0002405,4.35e-22,93;UBERON:0001434,3.00e-20,100;UBERON:0000178,3.75e-18,15;UBERON:0000179,3.75e-18,15;UBERON:0000463,3.75e-18,15;UBERON:0003081,2.37e-16,203;UBERON:0002204,2.04e-10,167;UBERON:0000926,1.48e-08,315;UBERON:0004120,1.48e-08,315;UBERON:0006603,1.48e-08,315 | |||
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| ||
|short_description=p8@MNDA | |short_description=p8@MNDA | ||
}} | }} |
Latest revision as of 21:45, 17 September 2015
Short description: | p8@MNDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_MNDA_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -231bp_to_ENST00000438394_5end |
EntrezGene: | MNDA |
HGNC: | 7183 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.99e-44 | 72 |
classical monocyte | 7.05e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.05e-40 | 42 |
defensive cell | 1.02e-38 | 48 |
phagocyte | 1.02e-38 | 48 |
monopoietic cell | 4.02e-37 | 59 |
monocyte | 4.02e-37 | 59 |
monoblast | 4.02e-37 | 59 |
promonocyte | 4.02e-37 | 59 |
myeloid cell | 7.70e-36 | 108 |
common myeloid progenitor | 7.70e-36 | 108 |
macrophage dendritic cell progenitor | 8.81e-36 | 61 |
myeloid lineage restricted progenitor cell | 8.84e-33 | 66 |
granulocyte monocyte progenitor cell | 3.12e-32 | 67 |
hematopoietic oligopotent progenitor cell | 2.71e-22 | 161 |
hematopoietic multipotent progenitor cell | 2.71e-22 | 161 |
hematopoietic stem cell | 3.87e-21 | 168 |
leukocyte | 5.19e-21 | 136 |
hematopoietic cell | 8.72e-20 | 177 |
neutrophil | 3.53e-19 | 3 |
nongranular leukocyte | 4.67e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 3.60e-16 | 120 |
granulocyte | 1.70e-12 | 8 |
blood cell | 4.16e-09 | 11 |
mesenchymal cell | 4.22e-07 | 354 |
connective tissue cell | 7.44e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.34e-39 | 98 |
blood island | 1.34e-39 | 98 |
hemolymphoid system | 1.84e-35 | 108 |
bone marrow | 6.03e-28 | 76 |
bone element | 1.32e-25 | 82 |
skeletal element | 5.80e-23 | 90 |
immune system | 4.35e-22 | 93 |
skeletal system | 3.00e-20 | 100 |
blood | 3.75e-18 | 15 |
haemolymphatic fluid | 3.75e-18 | 15 |
organism substance | 3.75e-18 | 15 |
lateral plate mesoderm | 2.37e-16 | 203 |
musculoskeletal system | 2.04e-10 | 167 |
mesoderm | 1.48e-08 | 315 |
mesoderm-derived structure | 1.48e-08 | 315 |
presumptive mesoderm | 1.48e-08 | 315 |