FFCP PHASE1:Hg19::chr1:158985469..158985489,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3428 | |EntrezGene=3428 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5395 | |HGNC=5395 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=6bp_to_ENST00000474473_5end | |association_with_transcript=6bp_to_ENST00000474473_5end | ||
|cluster_id=chr1:158985469..158985489,+ | |||
|coexpression_cluster_id=C1841 | |||
|description=CAGE_peak_7_at_IFI16_5end | |description=CAGE_peak_7_at_IFI16_5end | ||
|id=chr1:158985469..158985489,+ | |id=chr1:158985469..158985489,+ | ||
|ontology_enrichment_celltype=CL:0000763!6.59e-14!112;CL:0000049!6.59e-14!112;CL:0000839!1.03e-12!70;CL:0000766!5.39e-12!76;CL:0000557!9.44e-12!71;CL:0002194!3.54e-10!63;CL:0000576!3.54e-10!63;CL:0000040!3.54e-10!63;CL:0000559!3.54e-10!63;CL:0002009!1.19e-09!65;CL:0000063!1.36e-08!578;CL:0000134!4.57e-08!358;CL:0002320!2.27e-07!365;CL:0000219!2.76e-07!390;CL:0002032!4.69e-07!165;CL:0000837!4.69e-07!165;CL:0000860!5.06e-07!45 | |ontology_enrichment_celltype=CL:0000763!6.59e-14!112;CL:0000049!6.59e-14!112;CL:0000839!1.03e-12!70;CL:0000766!5.39e-12!76;CL:0000557!9.44e-12!71;CL:0002194!3.54e-10!63;CL:0000576!3.54e-10!63;CL:0000040!3.54e-10!63;CL:0000559!3.54e-10!63;CL:0002009!1.19e-09!65;CL:0000063!1.36e-08!578;CL:0000134!4.57e-08!358;CL:0002320!2.27e-07!365;CL:0000219!2.76e-07!390;CL:0002032!4.69e-07!165;CL:0000837!4.69e-07!165;CL:0000860!5.06e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.56e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.01e-11,108;CL:0000049,2.01e-11,108;CL:0000766,1.89e-09,72;CL:0000839,1.03e-08,66;CL:0000219,1.51e-08,386;CL:0000097,1.61e-08,5;CL:0002028,1.61e-08,5;CL:0000557,1.82e-08,67;CL:0000134,7.70e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.43e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0002193!6.22e-11!112;UBERON:0002371!9.05e-11!80;UBERON:0002390!1.96e-10!102;UBERON:0003061!1.96e-10!102;UBERON:0001474!2.30e-10!86;UBERON:0004765!6.04e-09!101;UBERON:0001434!6.04e-09!101;UBERON:0002405!5.79e-08!115;UBERON:0002384!2.22e-07!375 | |ontology_enrichment_uberon=UBERON:0002193!6.22e-11!112;UBERON:0002371!9.05e-11!80;UBERON:0002390!1.96e-10!102;UBERON:0003061!1.96e-10!102;UBERON:0001474!2.30e-10!86;UBERON:0004765!6.04e-09!101;UBERON:0001434!6.04e-09!101;UBERON:0002405!5.79e-08!115;UBERON:0002384!2.22e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.15e-08,76;UBERON:0002405,3.05e-08,93;UBERON:0001474,3.35e-08,82 | |||
|phase1_expression=1.63510541343501,1.07050261945492,1.12763523276777,0,0.446961094427288,1.74467704820074,0,0.631719873426831,1.04474251279935,0,0,0,0.263766978228454,0,0,0.672325146451775,2.41077811209591,1.46062018077475,0,0,0,0,0,0,0,1.75750833220288,3.20192298854788,3.06972047123349,0,0.383829398097213,0,0,0,0.369754010166788,0.154934401160603,0.142169232487422,0,0.553995408531877,0,0,1.56740831967947,2.26725566213286,1.80302897343931,0.581592955118259,0.755751887377619,0.970336244751265,0.697287110717054,0.411167888021826,1.23882548358041,4.60307827715441,3.07392847834921,4.96612682766029,1.37898272294647,0.645484683583826,1.35426486594342,0.564727018627814,0.818718450173537,0.224723484445085,0.918251677112708,0.320929027076094,0.639337125799041,9.89553900560148,7.18069167437875,5.11469700639233,0,0,1.24564449799115,2.76373531782418,5.21482918420201,3.9093992046921,0,0.736555271975129,2.21523671208619,0.633765858935825,0.212604299965044,0.628975936525128,0.44931452458598,0,0.64290234678832,0.285012743741249,0,0.547992461293902,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.790152254325231,0.196709770113833,0,0,1.67186495390678,0,0,0,0.891283655081389,0.294605907474837,0,0,1.5370958367081,2.21100890851793,0.986627427622057,0.276350017785848,0.289803085735052,0,0,0,0.566546713487831,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,0,0.670700859703636,0,0,0,0.144846518960824,1.5905718941022,0,0,0,0,0.130979075497713,0,0,0.324547393654683,1.0447784237956,1.06366368415092,0,0,0,0.39752481473341,0.860234595106124,0,0.56530794192401,0.419499436209906,1.10047216776027,0.208994966536811,3.87625138753993,6.04802646567407,2.67776490211736,0,0,0,0.735326160691737,0,1.25019619597712,1.12264686313085,0.563057402416611,0,0,0.183201743930407,1.31780417436063,0,0,0.496971951695318,0.633152558322899,5.16395805171553,0.573673241497627,0.354668382198357,0.560677600142307,0,0.98667019366864,2.8008993185979,1.21239604862719,0.980771418680752,0.151357427644931,0,0,2.49728061464256,2.85235910772225,0.747243402759005,0,0,0,1.83738754129404,0,1.65321249881225,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,2.77064115484183,0,1.22595118319608,0,0.567160915800105,0,0.213557388818567,0,0.300091096084402,0.206105058476878,0,0.37223371266318,0.843881661206331,0.194874010322397,0.252433774244115,0.276149695926898,0.323292113637624,0,0,0.169560592310488,0.966304265816484,1.09098448236334,0.860413786167011,0,0,0,0,0,0,1.56449532329816,0,0,0.928735856063958,5.77503585335668,0.946454400318751,0.168584690078102,0.723033089650446,1.10293972732394,1.52515610864684,1.66089433377768,2.42696354688296,1.17732879075208,1.15424147083917,0.738155454624648,0,0,0,0,0,0,0,0.368965315629341,0,0.329250856225877,0,0,0,0,0,0,0,0.352226082707465,0.144366447761074,0,0.951270761172991,0,0,4.67812311566055,3.97807250736704,0.743155811443641,0.93733833986777,0.839910640994298,0,0,0.581267877027924,0.383382679165211,26.111151608485,16.37700872646,13.0616712790686,22.1944728262121,16.0327890451503,3.80987365753014,1.14596527667483,0,0,1.85089486865982,2.40274446275134,4.57322292208925,0.224262168690721,0,0.7333828582095,2.06834745212444,0,0,0.797814349754612,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0,2.1100756394171,1.74306691720059,1.19967589418468,3.64871341923571,0.502257091432126,0,0.958499421966331,0,0,1.01346914667305,0.205476322550383,1.07436577943937,3.25046917581229,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,2.24702107184155,0,1.24324654030811,0,0.500170521059677,0.271265023699736,0.623912584592421,0.535286966391485,0.157702415033935,0,0.300946099727719,2.27407504055985,1.03473071292505,0,0,1.39013783148933,0,0,0,0,0.106727557803444,0,1.66435439510497,0,0.744323423456331,0.460385919864187,0.561320188866147,2.43464383585832,2.55853624533352,0.64341568457443,0,0.616838775210622,0.710246901252508,1.06765302817952,2.07701771673448,0.232420756919918,0,0.601519410909855,0.184161977871793,0.34444334449382,0.364182336013434,0.917870904715969,0,0.231046011313244,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0.325378394664303,0.515205058238611,0.0915694648183434,0,0,0,0,0,0.462145851343933,0,0,0.537101224341368,0.145016693914229,0,0.178064071293475,0.165284915360978,0,0.127612712494584,0.2023155617111,0.464845549297286,0,0,0.616067160352178,0,0,0,0,1.48863347743867,0.949138274156178,0.38126038784765,0,0,0.318203247925937,0,0.899362287916574,0.274537029736055,0.353437207037059,0.202182481573316,0,0.421258456238981,0,0,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0.655894752046633,0.405820753925408,0,0,0,0.0982490410131212,0.35667105148125,0.354761064070598,0.211107635297664,0.658589785919804,0,0,0.288666338176536,0,0,0.941438007767792,0,0,0,0.229723400206959,0.507447609232169,0,0,0.238231775457789,0.822724546172388,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0.557409525377156,0.144269212976445,0.355709216742071,0,0.59873811429845,1.1490322207942,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| ||
|short_description=p7@IFI16 | |short_description=p7@IFI16 | ||
}} | }} |
Latest revision as of 22:04, 17 September 2015
Short description: | p7@IFI16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_IFI16_5end |
Coexpression cluster: | C1841_melanoma_Mast_schwannoma_CD14_extraskeletal_Macrophage_giant |
Association with transcript: | 6bp_to_ENST00000474473_5end |
EntrezGene: | IFI16 |
HGNC: | 5395 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.01e-11 | 108 |
common myeloid progenitor | 2.01e-11 | 108 |
myeloid leukocyte | 1.89e-09 | 72 |
myeloid lineage restricted progenitor cell | 1.03e-08 | 66 |
motile cell | 1.51e-08 | 386 |
mast cell | 1.61e-08 | 5 |
basophil mast progenitor cell | 1.61e-08 | 5 |
granulocyte monocyte progenitor cell | 1.82e-08 | 67 |
mesenchymal cell | 7.70e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.15e-08 | 76 |
immune system | 3.05e-08 | 93 |
bone element | 3.35e-08 | 82 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.43e-07 | 239 |