FFCP PHASE1:Hg19::chr15:50557915..50557941,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3067 | |EntrezGene=3067 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4855 | |HGNC=4855 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000558761,uc001zxz.2,uc010bet.1,uc010beu.1,uc010uff.1_5end | |association_with_transcript=0bp_to_ENST00000558761,uc001zxz.2,uc010bet.1,uc010beu.1,uc010uff.1_5end | ||
|cluster_id=chr15:50557915..50557941,- | |||
|coexpression_cluster_id=C64 | |||
|description=CAGE_peak_1_at_HDC_5end | |description=CAGE_peak_1_at_HDC_5end | ||
|id=chr15:50557915..50557941,- | |id=chr15:50557915..50557941,- | ||
|ontology_enrichment_celltype=CL:0000763!1.42e-24!112;CL:0000049!1.42e-24!112;CL:0000037!1.58e-19!172;CL:0000566!1.58e-19!172;CL:0002032!1.23e-18!165;CL:0000837!1.23e-18!165;CL:0000988!4.04e-17!182;CL:0000766!7.66e-16!76;CL:0000839!8.37e-13!70;CL:0000557!5.08e-12!71;CL:0000738!2.49e-11!140;CL:0002057!9.74e-11!42;CL:0000860!2.82e-10!45;CL:0002031!6.07e-09!124;CL:0002009!4.65e-08!65;CL:0002194!5.95e-08!63;CL:0000576!5.95e-08!63;CL:0000040!5.95e-08!63;CL:0000559!5.95e-08!63;CL:0002274!7.75e-08!5;CL:0000457!7.75e-08!5;CL:0002191!7.75e-08!5;CL:0000097!7.75e-08!5;CL:0000831!7.75e-08!5;CL:0002028!7.75e-08!5;CL:0000094!1.68e-07!8 | |ontology_enrichment_celltype=CL:0000763!1.42e-24!112;CL:0000049!1.42e-24!112;CL:0000037!1.58e-19!172;CL:0000566!1.58e-19!172;CL:0002032!1.23e-18!165;CL:0000837!1.23e-18!165;CL:0000988!4.04e-17!182;CL:0000766!7.66e-16!76;CL:0000839!8.37e-13!70;CL:0000557!5.08e-12!71;CL:0000738!2.49e-11!140;CL:0002057!9.74e-11!42;CL:0000860!2.82e-10!45;CL:0002031!6.07e-09!124;CL:0002009!4.65e-08!65;CL:0002194!5.95e-08!63;CL:0000576!5.95e-08!63;CL:0000040!5.95e-08!63;CL:0000559!5.95e-08!63;CL:0002274!7.75e-08!5;CL:0000457!7.75e-08!5;CL:0002191!7.75e-08!5;CL:0000097!7.75e-08!5;CL:0000831!7.75e-08!5;CL:0002028!7.75e-08!5;CL:0000094!1.68e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000097;3.15e-13;5!CL:0000094;6.59e-13;8!CL:0000081;4.60e-09;11!CL:0000767;5.76e-08;3!CL:0000226;1.49e-07;3!CL:0000842;1.49e-07;3!CL:0000163;4.51e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.16e-13,5;CL:0002028,3.16e-13,5;CL:0000094,4.86e-13,8;CL:0000763,8.51e-12,108;CL:0000049,8.51e-12,108;CL:0000081,3.72e-09,11;CL:0000037,1.65e-08,168;CL:0000767,5.71e-08,3;CL:0000988,1.25e-07,177;CL:0000226,1.48e-07,3;CL:0000842,1.48e-07,3;CL:0002032,3.43e-07,161;CL:0000837,3.43e-07,161;CL:0000163,4.52e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!5.35e-07!31;DOID:1240!5.68e-07!39 | |ontology_enrichment_disease=DOID:8692!5.35e-07!31;DOID:1240!5.68e-07!39 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.99e-07,39;DOID:8692,3.86e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.20e-24!115;UBERON:0002390!1.45e-16!102;UBERON:0003061!1.45e-16!102;UBERON:0002193!2.86e-15!112;UBERON:0000178!6.47e-11!15;UBERON:0000179!6.47e-11!15;UBERON:0000463!6.47e-11!15;UBERON:0002371!1.97e-09!80;UBERON:0001474!3.56e-09!86 | |ontology_enrichment_uberon=UBERON:0007023!1.20e-24!115;UBERON:0002390!1.45e-16!102;UBERON:0003061!1.45e-16!102;UBERON:0002193!2.86e-15!112;UBERON:0000178!6.47e-11!15;UBERON:0000179!6.47e-11!15;UBERON:0000463!6.47e-11!15;UBERON:0002371!1.97e-09!80;UBERON:0001474!3.56e-09!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.79e-20;15!UBERON:0000179;3.79e-20;15!UBERON:0000463;3.79e-20;15!UBERON:0002390;2.31e-10;32!UBERON:0002193;3.07e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.78e-20,15;UBERON:0000179,3.78e-20,15;UBERON:0000463,3.78e-20,15;UBERON:0007023,1.33e-17,114;UBERON:0002193,5.85e-07,108;UBERON:0002390,7.85e-07,98;UBERON:0003061,7.85e-07,98 | |||
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| ||
|short_description=p1@HDC | |short_description=p1@HDC | ||
}} | }} |
Latest revision as of 23:26, 17 September 2015
Short description: | p1@HDC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HDC_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | 0bp_to_ENST00000558761, uc001zxz.2, uc010bet.1, uc010beu.1, uc010uff.1_5end |
EntrezGene: | HDC |
HGNC: | 4855 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.16e-13 | 5 |
basophil mast progenitor cell | 3.16e-13 | 5 |
granulocyte | 4.86e-13 | 8 |
myeloid cell | 8.51e-12 | 108 |
common myeloid progenitor | 8.51e-12 | 108 |
blood cell | 3.72e-09 | 11 |
hematopoietic stem cell | 1.65e-08 | 168 |
basophil | 5.71e-08 | 3 |
hematopoietic cell | 1.25e-07 | 177 |
single nucleate cell | 1.48e-07 | 3 |
mononuclear cell | 1.48e-07 | 3 |
hematopoietic oligopotent progenitor cell | 3.43e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.43e-07 | 161 |
endocrine cell | 4.52e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
blood | 3.78e-20 | 15 |
haemolymphatic fluid | 3.78e-20 | 15 |
organism substance | 3.78e-20 | 15 |
adult organism | 1.33e-17 | 114 |
hemolymphoid system | 5.85e-07 | 108 |
hematopoietic system | 7.85e-07 | 98 |
blood island | 7.85e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.99e-07 | 39 |
myeloid leukemia | 3.86e-07 | 31 |