FFCP PHASE1:Hg19::chr19:40030734..40030777,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=163126 | |EntrezGene=163126 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28292 | |HGNC=28292 | ||
|TSSclassifier=strong | |||
|UniProt=F5GYE7,Q8N6I1 | |UniProt=F5GYE7,Q8N6I1 | ||
|association_with_transcript=60bp_to_ENST00000539700,NM_153232,uc002oma.2_5end | |association_with_transcript=60bp_to_ENST00000539700,NM_153232,uc002oma.2_5end | ||
|cluster_id=chr19:40030734..40030777,- | |||
|description=CAGE_peak_3_at_EID2_5end | |description=CAGE_peak_3_at_EID2_5end | ||
|id=chr19:40030734..40030777,- | |id=chr19:40030734..40030777,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0000066!1.95e-09!254;CL:0000213!3.84e-07!57;CL:0000215!3.84e-07!57 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.55e-09,253;CL:0000213,1.83e-07,58;CL:0000215,1.83e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000478;2.88e-07;24 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!6.08e-19!659;UBERON:0000467!1.00e-18!625;UBERON:0000480!1.97e-18!626;UBERON:0000062!5.19e-17!511;UBERON:0000923!1.09e-12!604;UBERON:0005291!1.09e-12!604;UBERON:0006598!1.09e-12!604;UBERON:0002532!1.09e-12!604;UBERON:0002050!1.50e-12!605;UBERON:0005423!1.50e-12!605;UBERON:0000922!9.08e-12!612;UBERON:0000926!1.93e-08!448;UBERON:0004120!1.93e-08!448;UBERON:0006603!1.93e-08!448;UBERON:0005631!2.94e-08!14;UBERON:0000158!2.94e-08!14;UBERON:0000475!4.58e-08!365;UBERON:0000478!1.44e-07!24;UBERON:0000119!6.26e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.88e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,9.22e-09,592;UBERON:0005423,1.49e-08,581;UBERON:0002050,1.52e-08,564;UBERON:0005631,2.84e-08,14;UBERON:0000158,2.84e-08,14;UBERON:0000923,3.84e-08,560;UBERON:0010316,3.84e-08,560;UBERON:0005291,3.84e-08,560;UBERON:0006598,3.84e-08,560;UBERON:0010317,3.84e-08,560;UBERON:0002532,3.84e-08,560;UBERON:0000478,1.39e-07,24;UBERON:0000119,4.57e-07,309;UBERON:0000483,7.37e-07,306 | |||
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| ||
|short_description=p3@EID2 | |short_description=p3@EID2 | ||
}} | }} |
Latest revision as of 00:00, 18 September 2015
Short description: | p3@EID2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EID2_5end |
Coexpression cluster: | NA |
Association with transcript: | 60bp_to_ENST00000539700, NM_153232, uc002oma.2_5end |
EntrezGene: | EID2 |
HGNC: | 28292 |
UniProt: | F5GYE7Q8N6I1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.55e-09 | 253 |
lining cell | 1.83e-07 | 58 |
barrier cell | 1.83e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
embryo | 9.22e-09 | 592 |
developing anatomical structure | 1.49e-08 | 581 |
embryonic structure | 1.52e-08 | 564 |
extraembryonic membrane | 2.84e-08 | 14 |
membranous layer | 2.84e-08 | 14 |
germ layer | 3.84e-08 | 560 |
germ layer / neural crest | 3.84e-08 | 560 |
embryonic tissue | 3.84e-08 | 560 |
presumptive structure | 3.84e-08 | 560 |
germ layer / neural crest derived structure | 3.84e-08 | 560 |
epiblast (generic) | 3.84e-08 | 560 |
extraembryonic structure | 1.39e-07 | 24 |
cell layer | 4.57e-07 | 309 |
epithelium | 7.37e-07 | 306 |