FFCP PHASE1:Hg19::chr5:49737241..49737253,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=133418 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30465 | |||
|TSSclassifier=strong | |||
|UniProt=Q6PCB8 | |||
|association_with_transcript=-7bp_to_NM_198449,uc003jom.2,uc010ivr.2_5end | |||
|cluster_id=chr5:49737241..49737253,- | |||
|description=CAGE_peak_5_at_EMB_5end | |||
|id=chr5:49737241..49737253,- | |||
|ontology_enrichment_celltype=CL:0000037!1.08e-12!172;CL:0000566!1.08e-12!172;CL:0002087!4.49e-12!119;CL:0000988!1.41e-11!182;CL:0002032!2.98e-11!165;CL:0000837!2.98e-11!165;CL:0000738!1.03e-10!140;CL:0002031!8.52e-09!124;CL:0002194!3.30e-08!63;CL:0000576!3.30e-08!63;CL:0000040!3.30e-08!63;CL:0000559!3.30e-08!63;CL:0000763!3.75e-08!112;CL:0000049!3.75e-08!112;CL:0002009!1.25e-07!65;CL:0000839!7.48e-07!70;CL:0000557!7.57e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002032;3.75e-11;1!CL:0000557;3.75e-11;1!CL:0000840;2.61e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,9.17e-11,108;CL:0000049,9.17e-11,108;CL:0000557,2.79e-10,67;CL:0000766,1.80e-09,72;CL:0002194,2.56e-09,59;CL:0000576,2.56e-09,59;CL:0000040,2.56e-09,59;CL:0000559,2.56e-09,59;CL:0002009,5.51e-09,61;CL:0000839,3.07e-08,66;CL:0002032,7.18e-08,161;CL:0000837,7.18e-08,161;CL:0000037,1.86e-07,168;CL:0000840,2.02e-07,5;CL:0001029,2.02e-07,5;CL:0000988,5.69e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;1.24e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.36e-08,39;DOID:8692,1.33e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.91e-07!102;UBERON:0003061!1.91e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.21e-09,76;UBERON:0002390,3.12e-08,98;UBERON:0003061,3.12e-08,98;UBERON:0001474,3.39e-08,82;UBERON:0004765,2.30e-07,90;UBERON:0002193,2.43e-07,108;UBERON:0002405,4.33e-07,93 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492603536699674,0.0787107813136792,0,0,0.309632246632152,0,0,0.739508020333575,0.852139206383318,0.284338464974843,0.293600439334847,0.553995408531877,0,0.434021741431704,0.671746422719773,0,0.515151135268373,0,0,0.242584061187816,0.697287110717054,0.411167888021826,0.309706370895104,0.28769239232215,0,0.236482229888585,0.344745680736619,1.29096936716765,0,0.564727018627814,0.545812300115692,0.674170453335254,0,0,0,0.659702600373432,0.199463657621632,0,0.580418477257168,0.56738522469114,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0.44931452458598,1.20141514273205,0.32145117339416,0,0,0,0,0,0.889509253863555,0,0.400395987036012,0,0.661044872784862,0,0,0,0,0,0,0.526768169550154,0.196709770113833,0.393010762749165,0.205601498999509,0.334372990781356,0,0.473447805734733,0,0.111410456885174,0.294605907474837,0.221533894583621,0,0.25618263945135,0.390178042679635,0,0,0.289803085735052,0.444859689486181,0,0,0.226618685395132,0.383220493601921,0,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0,0,0.236777252044017,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.196468613246569,0,0,2.59637914923747,1.91542711029194,0.797747763113191,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,0.818238361772504,0.286804595389004,0.121973706129595,0.265059536642971,0.116193942869518,0.310983165046111,0.504641701751257,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658501712451753,0,0.402115889646523,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0.858486162094873,0,0.234004265139238,0,0,0.839910640994298,0.283550194484773,0.806026704325635,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904902010304444,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0.199945982364114,0,0.502257091432126,2.10833939483032,0,0,0,0.579125226670317,0.205476322550383,0.179060963239896,0,0,0.431255149719035,0,0,0,0,0,0,0,0,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0.184369168541703,0,0,0,0.82707210449155,0.647142602455851,0.320182673410333,0,0,0,0,0.153461973288062,0,0,0,0.64341568457443,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0.802025881213139,0.552485933615378,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0.991709492165869,0.576570202095319,0.638063562472921,0.6069466851333,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0.243713489631284,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.288666338176536,0,0,0,0.43050537267123,0,0.443430153536676,0,1.01489521846434,0,0,0,0,0.648473311192717,0,0,0.106824071127473,0,0.245040215981032,0.557409525377156,0,0.142283686696828,0.318852545457645,0,0.383010740264733,0,0.649243880549111,0.842391534340376,0,0.313359791546046,0,0,0.321176150207399,0.403599414382095,0.425846237690326,1.03051603426729,2.76516687877612,2.46043718681657,2.16903884225481,0.781552381608161,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0,0.329607748453519,0,0.19924798825107,0,0.503865495708552,0,0,0,0.269605053441981,0.179021174675609,1.02314474045374,0,0,0,0,0.0927680981618513,0,0.260427761085233,0.174919999992391,0,0.227586896570999,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0,0.113942055847001,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0.317873157960757,0,0,0,0,0,1.59223616106011,0,0.296521128680622,0,0.208843899010911,0.067401132980677,0,0,0,0.391329237864179,0,0,1.20990716048664,0,0.189559738885464,0.60129367765797,0.518440956986236,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0,0,0,0,0,0,0.274083849293502,0.794858446811959,0.0633107959558787,0,0.160317640503067,0.426905989478705,0,0.144090417154106,0.343609788497747,0,0,0.124252535565433,0.235694034616795,0,0,0,0,0,0,2.55493176133945,0,0,0,0.687481272035051,0,0,0,0,0,0,0,0,0,0,0,0.508039992394707,0,0,0.321506296930038,0.412618309791701,0,0,0,0,0,0,0,0,0,0,0,0,0.5085370753095,0.542999601753713,0.864221491201268,0.326587360109409,0,0.246277562248017,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0.992332043623902,0.395223263795889,0,0.638341257770182,0,0,0,0,0.628216385000937,0,0.122026264901963,0,0,0,0.0620964029413835,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0.310525913752519,0,0.53168342911599,0,0.601030435988874,0,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0.260994291965212,0.453411851024545,1.15761237161917,0,0.179088841081487,0,0.219284049578707,0.176689145945881,0,0.168942440653073,0,0,0,0,0.584580926518165,0.531459361253452,0.163565394255844,0,0,0.211312123358627,0.79994958341972,0,0,0,0,0.139879507719444,0,0.127894371303652,0,0,0,0,0,0,0,0,0.0788617450012534,0.80057074828547,0,0,0,0,0,0.205116364240755,0,0,0,0,0.392590874004102,0.353909170043221,0.550285795565037,0.346576998451015,0,0.690359926060101,0,0.150420656698515,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.339848664884159,0,0.590969204419841,0.111231401892069,0.078493092850514,0,0,0,0.431855182437243,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0.255640214277473,0,0.22910686854405,0,0,0,0,0.121917924982269,0,0,0,0.485710993059139,0,0,0,0.90356865631168,0,0,4.78479780269257,0.655678681511872,0,0,0.235676547101626,0,0.297046400327086,0,0,0.563903507879121,0.0644578879735772,0.0999411559249289,0.357107877211315,0.705789743431384,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0.26721740526556,0.18378979906969,0,0.151557396436479,0,0,0,0.213233981900981,0,0.322944549180031,0.124149428591716,0.112131862580613,0.318235791390825,1.21270313374932,0.870866991587845,0,0.202056159043763,0.358611026963382,0,0.325613074443898,0.213454691755431,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p5@EMB | |||
}} |
Latest revision as of 01:40, 18 September 2015
Short description: | p5@EMB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_EMB_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_NM_198449, uc003jom.2, uc010ivr.2_5end |
EntrezGene: | EMB |
HGNC: | 30465 |
UniProt: | Q6PCB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 9.17e-11 | 108 |
common myeloid progenitor | 9.17e-11 | 108 |
granulocyte monocyte progenitor cell | 2.79e-10 | 67 |
myeloid leukocyte | 1.80e-09 | 72 |
monopoietic cell | 2.56e-09 | 59 |
monocyte | 2.56e-09 | 59 |
monoblast | 2.56e-09 | 59 |
promonocyte | 2.56e-09 | 59 |
macrophage dendritic cell progenitor | 5.51e-09 | 61 |
myeloid lineage restricted progenitor cell | 3.07e-08 | 66 |
hematopoietic oligopotent progenitor cell | 7.18e-08 | 161 |
hematopoietic multipotent progenitor cell | 7.18e-08 | 161 |
hematopoietic stem cell | 1.86e-07 | 168 |
immature conventional dendritic cell | 2.02e-07 | 5 |
common dendritic progenitor | 2.02e-07 | 5 |
hematopoietic cell | 5.69e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.21e-09 | 76 |
hematopoietic system | 3.12e-08 | 98 |
blood island | 3.12e-08 | 98 |
bone element | 3.39e-08 | 82 |
skeletal element | 2.30e-07 | 90 |
hemolymphoid system | 2.43e-07 | 108 |
immune system | 4.33e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.36e-08 | 39 |
myeloid leukemia | 1.33e-07 | 31 |