FFCP PHASE1:Hg19::chr2:171571827..171571853,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389058 | |EntrezGene=389058 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14529 | |HGNC=14529 | ||
|TSSclassifier=strong | |||
|UniProt=Q6BEB4 | |UniProt=Q6BEB4 | ||
|association_with_transcript=-3bp_to_NM_001003845,uc002uge.2_5end | |association_with_transcript=-3bp_to_NM_001003845,uc002uge.2_5end | ||
|cluster_id=chr2:171571827..171571853,+ | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_1_at_SP5_5end | |description=CAGE_peak_1_at_SP5_5end | ||
|id=chr2:171571827..171571853,+ | |id=chr2:171571827..171571853,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.58e-07!5 | |ontology_enrichment_celltype=CL:0002322!1.58e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;4.77e-19;5!CL:0000182;5.88e-11;12!CL:0002563;4.89e-09;4!CL:0002253;2.55e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.88e-19,5;CL:0000182,5.90e-11,12;CL:0000223,2.31e-09,58;CL:0002563,6.69e-09,4;CL:0002253,3.87e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.04e-12;11!UBERON:0009497;6.14e-10;13!UBERON:0001041;1.39e-08;30!UBERON:0003104;3.89e-08;31 | |||
|ontology_enrichment_disease=DOID:305!2.50e-14!106;DOID:0050687!4.46e-10!143;DOID:162!1.62e-07!235;DOID:14566!5.51e-07!239;DOID:3119!9.54e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3119;1.02e-08;14!DOID:3493;5.53e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.86e-11,106;DOID:0050687,1.01e-08,143;DOID:3119,1.48e-08,14;DOID:3493,4.31e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.52e-11!115;UBERON:0004921!2.46e-11!129;UBERON:0004185!2.46e-11!129;UBERON:0001007!2.03e-10!155;UBERON:0001555!2.03e-10!155;UBERON:0007026!2.03e-10!155;UBERON:0000077!8.86e-10!130;UBERON:0004119!9.77e-10!169;UBERON:0000925!9.77e-10!169;UBERON:0006595!9.77e-10!169;UBERON:0005911!5.70e-09!82;UBERON:0005409!1.06e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;5.04e-11;22!UBERON:0001242;4.89e-09;4!UBERON:0001262;4.89e-09;4!UBERON:0004786;4.89e-09;4!UBERON:0004808;4.89e-09;4!UBERON:0001277;4.89e-09;4!UBERON:0002107;9.08e-09;19!UBERON:0006925;9.08e-09;19!UBERON:0004921;2.54e-08;33!UBERON:0002423;2.58e-08;25!UBERON:0000922;7.18e-08;49!UBERON:0000945;6.30e-07;5!UBERON:0010039;6.30e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007499,1.49e-10,25;UBERON:0009856,4.43e-10,26;UBERON:0008835,1.22e-09,22;UBERON:0003894,1.22e-09,22;UBERON:0005409,1.77e-09,25;UBERON:0004921,2.54e-09,118;UBERON:0009854,3.69e-09,23;UBERON:0005911,6.64e-09,82;UBERON:0001242,6.69e-09,4;UBERON:0001262,6.69e-09,4;UBERON:0004786,6.69e-09,4;UBERON:0004808,6.69e-09,4;UBERON:0001277,6.69e-09,4;UBERON:0002107,8.94e-09,19;UBERON:0006925,8.94e-09,19;UBERON:0008836,8.94e-09,19;UBERON:0003929,1.07e-08,54;UBERON:0009497,2.57e-08,25;UBERON:0000015,2.57e-08,25;UBERON:0002423,2.57e-08,25;UBERON:0006235,2.57e-08,25;UBERON:0004161,2.57e-08,25;UBERON:0001007,1.77e-07,145;UBERON:0001555,1.77e-07,145;UBERON:0007026,1.77e-07,145;UBERON:0004119,4.95e-07,160;UBERON:0000925,4.95e-07,160;UBERON:0006595,4.95e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0.408001382488506,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,3.53723747775827,5.56625026950238,9.41170937243099,9.22583389636797,8.57890892977137,2.55484151353081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,0.590789906681404,0,22.2609073763036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54657762555539,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0,35.8952565287118,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8714054040822,1.46508179271894,0,0,6.81926752335391,0,0,0,0,0.140669416410513,0.111308705022906,2.30725423917463,0,0.398495976502139,0.828851746593443,0.251932747854276,0,0.123084805461069,0,0.449341755736634,0.358042349351218,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0,2.17499872630438,0,0,0,0.344743373241465,0,0.520874984799877,0,0.120596438625408,1.52581736317083,0.110579259931225,0.886642856860642,0.438770794307945,0,0.83654246567162,1.61595542857974,0.113942055847001,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0.676786981851542,0,0.167821586975843,0,0,0,0,29.4014388582597,1.08194319871046,1.99052386215701,0.619202951523374,0,0.889563386041866,1.35920332841153,1.25306339406546,0.539209063845416,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0,0.751617097072463,0.311064574191741,0,0,0,0,0,0,0,0,0.957651272384428,0.698906672968121,0,0.0967563312890851,0,0,0.581934098930517,0,0.677942222341597,0,0,0.189932387867636,0,0.64127056201227,0.85381197895741,2.39771531498556,0.288180834308212,1.14536596165916,0,0,0,0,0.407712618220842,0.104602846312333,0,0,0,0,0,0,0.788662062837943,0,0.687481272035051,0.717873024576814,0,0,0,0,0,79.2172456786686,121.641233482353,104.668140144081,108.182687885967,0,0,0,0,15.4323022526418,0.825236619583403,0.415440338029185,0,0,0.0607495566580247,0,0.157611414598396,0.367182116944987,0.211200673038813,0,5.56554072226391,0,0,0,0,0,0,0,0.246277562248017,0,0,1.46552233678082,0,0.129282956361551,0,0,0,0.640724475406168,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,9.42324577501406,0,0,0,0,0,0.248385611765534,1.66018361923477,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521988583930423,0.680117776536817,0.231522474323834,0.489473409012935,0,0,0.877136198314828,0.353378291891762,0.964570191354574,0,0,0,2.43087964941906,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,1.76450187355203,0.276629009856872,0.161475645631851,0,1.57036349601641,0,0.183428598521679,0.808679663052368,0,0,0,0,0.40341013740704,0,0,0,3.40068998299204,0.270150338473579,0.781078098613847,0,0,1.64092442705466,0,0.496211178389294,0,0.127762427639595,0.535701835878287,0.336283722218824,0,0,0.709618961301111,0,1.37190407549935,0.0679697329768317,0.131545547125698,0.590969204419841,0.222462803784138,1.41287567130925,0,0.280272163313789,0.913158720509496,0,0.47775168788705,0.714765441766563,0,3.95220846251626,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0.223710863595585,2.15930513953535,1.82876887473404,0,0.307988420568741,5.799072156691,0.485710993059139,0.467878926924211,0.397901550322736,0,8.92274048107784,0.879524133963433,0.150962843566674,0.540219106755613,1.31135736302374,0,0.245148321753905,0,0,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0.160482733378337,0.730336388246517,0,0,2.99765968167051,0.135982980381829,0.436350690340377,0,0,0,0,0.756998549010474,1.63898357945543,27.1134792164475,1.22386595690378,5.07713070004565,5.14611437395132,0.50141507858475,0.757786982182394,0,0,0,0.213233981900981,0.952257725854961,0.0645889098360061,0.0620747142958579,0,0,0,0,0.684466602170562,1.27968900727716,0.573777643141411,0,0.244209805832924,1.17400080465487,0,0.359300808426348,0,0.611207220914332,0.406896178315738,0,0.201273793591026,0 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| ||
|short_description=p1@SP5 | |short_description=p1@SP5 | ||
}} | }} |
Latest revision as of 03:16, 18 September 2015
Short description: | p1@SP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SP5_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | -3bp_to_NM_001003845, uc002uge.2_5end |
EntrezGene: | SP5 |
HGNC: | 14529 |
UniProt: | Q6BEB4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.88e-19 | 5 |
hepatocyte | 5.90e-11 | 12 |
endodermal cell | 2.31e-09 | 58 |
intestinal epithelial cell | 6.69e-09 | 4 |
epithelial cell of large intestine | 3.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelial sac | 1.49e-10 | 25 |
sac | 4.43e-10 | 26 |
hepatic diverticulum | 1.22e-09 | 22 |
liver primordium | 1.22e-09 | 22 |
gastrointestinal system | 1.77e-09 | 25 |
subdivision of digestive tract | 2.54e-09 | 118 |
digestive tract diverticulum | 3.69e-09 | 23 |
endo-epithelium | 6.64e-09 | 82 |
intestinal mucosa | 6.69e-09 | 4 |
wall of intestine | 6.69e-09 | 4 |
gastrointestinal system mucosa | 6.69e-09 | 4 |
gastrointestinal system epithelium | 6.69e-09 | 4 |
intestinal epithelium | 6.69e-09 | 4 |
liver | 8.94e-09 | 19 |
digestive gland | 8.94e-09 | 19 |
liver bud | 8.94e-09 | 19 |
gut epithelium | 1.07e-08 | 54 |
epithelium of foregut-midgut junction | 2.57e-08 | 25 |
anatomical boundary | 2.57e-08 | 25 |
hepatobiliary system | 2.57e-08 | 25 |
foregut-midgut junction | 2.57e-08 | 25 |
septum transversum | 2.57e-08 | 25 |
digestive system | 1.77e-07 | 145 |
digestive tract | 1.77e-07 | 145 |
primitive gut | 1.77e-07 | 145 |
endoderm-derived structure | 4.95e-07 | 160 |
endoderm | 4.95e-07 | 160 |
presumptive endoderm | 4.95e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.86e-11 | 106 |
cell type cancer | 1.01e-08 | 143 |
gastrointestinal system cancer | 1.48e-08 | 14 |
signet ring cell adenocarcinoma | 4.31e-08 | 2 |