FFCP PHASE1:Hg19::chr2:174146763..174146766,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:174146763..174146766,-
|short_description=p1@MLK7-AS1
|description=CAGE_peak_1_at_MLK7-AS1_5end
|association_with_transcript=0bp_to_ENST00000423106,NR_0338...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=339751 | |EntrezGene=339751 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=27935 | |HGNC=27935 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000423106,NR_033882_5end | |||
|cluster_id=chr2:174146763..174146766,- | |||
|coexpression_cluster_id=C99 | |||
|description=CAGE_peak_1_at_MLK7-AS1_5end | |||
|id=chr2:174146763..174146766,- | |||
|ontology_enrichment_celltype=CL:0000242!8.68e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;6.76e-26;2!CL:0000242;6.76e-26;2!CL:0000312;5.85e-11;5!CL:0000240;2.78e-09;6!CL:0000311;2.78e-09;6!CL:0000079;2.78e-09;6!CL:0000237;2.78e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,6.76e-26,2;CL:0000312,5.85e-11,5;CL:0000240,2.78e-09,6;CL:0000311,2.78e-09,6;CL:0000079,2.78e-09,6;CL:0000237,2.78e-09,6;CL:0000036,2.78e-09,6;CL:0000357,2.78e-09,6;CL:0000114,2.78e-09,6 | |||
|ontology_enrichment_development_v019=CL:0000357;2.78e-09;6!CL:0000114;2.78e-09;6 | |||
|ontology_enrichment_disease=DOID:0060058!4.72e-14!10;DOID:2531!2.15e-08!51;DOID:0060083!2.15e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:0060060;4.53e-14;1!DOID:0060061;4.53e-14;1!DOID:8691;4.53e-14;1!DOID:6193;5.15e-14;1!DOID:2355;1.25e-13;1!DOID:0060058;8.42e-12;10!DOID:3350;1.20e-07;2!DOID:74;1.87e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,4.53e-14,1;DOID:0060061,4.53e-14,1;DOID:8691,4.53e-14,1;DOID:6193,5.15e-14,1;DOID:2355,1.25e-13,1;DOID:0060058,8.42e-12,10;DOID:3350,1.20e-07,2;DOID:74,1.87e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;1.95e-13;1!UBERON:0001961;1.95e-13;1!UBERON:0001744;1.95e-13;1!UBERON:0001042;1.95e-13;1!UBERON:0001735;1.95e-13;1!UBERON:0002331;6.15e-12;10!UBERON:0000178;3.88e-08;15!UBERON:0000179;3.88e-08;15!UBERON:0000463;3.88e-08;15!UBERON:0006562;2.32e-07;2!UBERON:0000473;4.99e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,1.83e-13,1;UBERON:0001961,1.83e-13,1;UBERON:0001744,1.83e-13,1;UBERON:0001735,1.83e-13,1;UBERON:0002331,6.26e-12,10;UBERON:0000358,6.26e-12,10;UBERON:0000307,6.26e-12,10;UBERON:0000091,6.26e-12,10;UBERON:0000087,6.26e-12,10;UBERON:0007010,6.26e-12,10;UBERON:0007806,6.26e-12,10;UBERON:0008780,6.26e-12,10;UBERON:0005728,6.26e-12,10;UBERON:0000178,3.92e-08,15;UBERON:0000179,3.92e-08,15;UBERON:0000463,3.92e-08,15;UBERON:0000473,4.99e-07,8 | |||
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| ||
|short_description=p1@MLK7-AS1 | |||
}} | }} |
Latest revision as of 06:27, 18 September 2015
Short description: | p1@MLK7-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MLK7-AS1_5end |
Coexpression cluster: | C99_hairy_mycosis_submaxillary_salivary_cord_kidney_parotid |
Association with transcript: | 0bp_to_ENST00000423106, NR_033882_5end |
EntrezGene: | MLK7-AS1 |
HGNC: | 27935 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 6.76e-26 | 2 |
keratinocyte | 5.85e-11 | 5 |
stratified squamous epithelial cell | 2.78e-09 | 6 |
keratin accumulating cell | 2.78e-09 | 6 |
stratified epithelial cell | 2.78e-09 | 6 |
keratinizing barrier epithelial cell | 2.78e-09 | 6 |
epithelial fate stem cell | 2.78e-09 | 6 |
stratified epithelial stem cell | 2.78e-09 | 6 |
surface ectodermal cell | 2.78e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
tonsil | 1.83e-13 | 1 |
mucosa-associated lymphoid tissue | 1.83e-13 | 1 |
lymphoid tissue | 1.83e-13 | 1 |
tonsillar ring | 1.83e-13 | 1 |
umbilical cord | 6.26e-12 | 10 |
blastocyst | 6.26e-12 | 10 |
blastula | 6.26e-12 | 10 |
bilaminar disc | 6.26e-12 | 10 |
inner cell mass | 6.26e-12 | 10 |
cleaving embryo | 6.26e-12 | 10 |
connecting stalk | 6.26e-12 | 10 |
inner cell mass derived epiblast | 6.26e-12 | 10 |
extraembryonic mesoderm | 6.26e-12 | 10 |
blood | 3.92e-08 | 15 |
haemolymphatic fluid | 3.92e-08 | 15 |
organism substance | 3.92e-08 | 15 |
testis | 4.99e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 4.53e-14 | 1 |
cutaneous T cell lymphoma | 4.53e-14 | 1 |
mycosis fungoides | 4.53e-14 | 1 |
epithelioid sarcoma | 5.15e-14 | 1 |
anemia | 1.25e-13 | 1 |
lymphoma | 8.42e-12 | 10 |
mesenchymal cell neoplasm | 1.20e-07 | 2 |
hematopoietic system disease | 1.87e-07 | 2 |