FFCP PHASE1:Hg19::chr2:175113301..175113333,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29789 | |EntrezGene=29789 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28833 | |HGNC=28833 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000344357_5end | |association_with_transcript=0bp_to_ENST00000344357_5end | ||
|cluster_id=chr2:175113301..175113333,- | |||
|description=CAGE_peak_3_at_OLA1_5end | |description=CAGE_peak_3_at_OLA1_5end | ||
|id=chr2:175113301..175113333,- | |id=chr2:175113301..175113333,- | ||
|ontology_enrichment_celltype=CL:0000066!5.14e-28!254;CL:0000223!1.92e-13!59;CL:0002321!1.32e-10!248;CL:0000220!5.54e-10!246;CL:0002076!5.84e-10!43;CL:0000076!3.35e-07!62;CL:0000082!4.04e-07!19 | |ontology_enrichment_celltype=CL:0000066!5.14e-28!254;CL:0000223!1.92e-13!59;CL:0002321!1.32e-10!248;CL:0000220!5.54e-10!246;CL:0002076!5.84e-10!43;CL:0000076!3.35e-07!62;CL:0000082!4.04e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.24e-07;42!CL:0000082;3.89e-07;19 | |ontology_enrichment_celltype_v019=CL:0002076;1.24e-07;42!CL:0000082;3.89e-07;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.52e-28,253;CL:0000223,1.16e-13,58;CL:0002321,9.75e-11,250;CL:0002076,3.53e-10,42;CL:0000082,4.04e-07,19;CL:0000076,4.25e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000223;4.84e-08;58 | |ontology_enrichment_development_v019=CL:0000223;4.84e-08;58 | ||
|ontology_enrichment_disease=DOID:162!4.77e-45!235;DOID:14566!8.97e-44!239;DOID:0050687!1.70e-31!143;DOID:305!7.57e-26!106;DOID:0050686!1.51e-17!137;DOID:2531!1.44e-07!51;DOID:0060083!1.44e-07!51;DOID:8692!2.94e-07!31;DOID:3095!3.29e-07!22;DOID:2994!3.29e-07!22 | |ontology_enrichment_disease=DOID:162!4.77e-45!235;DOID:14566!8.97e-44!239;DOID:0050687!1.70e-31!143;DOID:305!7.57e-26!106;DOID:0050686!1.51e-17!137;DOID:2531!1.44e-07!51;DOID:0060083!1.44e-07!51;DOID:8692!2.94e-07!31;DOID:3095!3.29e-07!22;DOID:2994!3.29e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:305;5.33e-08;106!DOID:0050687;5.65e-08;143!DOID:3095;3.36e-07;22!DOID:2994;3.36e-07;22!DOID:8692;4.00e-07;31 | |ontology_enrichment_disease_v019=DOID:305;5.33e-08;106!DOID:0050687;5.65e-08;143!DOID:3095;3.36e-07;22!DOID:2994;3.36e-07;22!DOID:8692;4.00e-07;31 | ||
|ontology_enrichment_disease_v019_2=DOID:162,4.77e-45,235;DOID:14566,8.97e-44,239;DOID:0050687,1.70e-31,143;DOID:305,7.57e-26,106;DOID:0050686,1.51e-17,137;DOID:2531,1.44e-07,51;DOID:0060083,1.44e-07,51;DOID:8692,2.94e-07,31;DOID:3095,3.29e-07,22;DOID:2994,3.29e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000481!4.81e-11!347;UBERON:0000073!1.98e-09!94;UBERON:0001016!1.98e-09!94;UBERON:0000924!9.27e-09!173;UBERON:0006601!9.27e-09!173;UBERON:0004121!2.27e-08!169;UBERON:0005743!5.24e-08!86;UBERON:0001017!1.49e-07!82;UBERON:0000119!2.11e-07!312;UBERON:0000483!2.88e-07!309;UBERON:0004802!4.04e-07!19;UBERON:0000115!4.04e-07!19;UBERON:0008947!4.21e-07!38;UBERON:0003258!4.21e-07!38;UBERON:0001007!6.27e-07!155;UBERON:0001555!6.27e-07!155;UBERON:0007026!6.27e-07!155 | |ontology_enrichment_uberon=UBERON:0000481!4.81e-11!347;UBERON:0000073!1.98e-09!94;UBERON:0001016!1.98e-09!94;UBERON:0000924!9.27e-09!173;UBERON:0006601!9.27e-09!173;UBERON:0004121!2.27e-08!169;UBERON:0005743!5.24e-08!86;UBERON:0001017!1.49e-07!82;UBERON:0000119!2.11e-07!312;UBERON:0000483!2.88e-07!309;UBERON:0004802!4.04e-07!19;UBERON:0000115!4.04e-07!19;UBERON:0008947!4.21e-07!38;UBERON:0003258!4.21e-07!38;UBERON:0001007!6.27e-07!155;UBERON:0001555!6.27e-07!155;UBERON:0007026!6.27e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0000072;2.96e-07;37!UBERON:0004802;3.89e-07;19!UBERON:0000115;3.89e-07;19!UBERON:0004807;4.44e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0000072;2.96e-07;37!UBERON:0004802;3.89e-07;19!UBERON:0000115;3.89e-07;19!UBERON:0004807;4.44e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,4.18e-14,223;UBERON:0001016,4.36e-09,89;UBERON:0004121,2.05e-08,171;UBERON:0000924,2.05e-08,171;UBERON:0006601,2.05e-08,171;UBERON:0001017,1.14e-07,81;UBERON:0000119,3.77e-07,309;UBERON:0004802,4.04e-07,19;UBERON:0000115,4.04e-07,19;UBERON:0008947,4.21e-07,38;UBERON:0003258,4.21e-07,38;UBERON:0000483,5.11e-07,306 | |||
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| ||
|short_description=p3@OLA1 | |short_description=p3@OLA1 | ||
}} | }} |
Latest revision as of 07:04, 18 September 2015
Short description: | p3@OLA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_OLA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000344357_5end |
EntrezGene: | OLA1 |
HGNC: | 28833 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.52e-28 | 253 |
endodermal cell | 1.16e-13 | 58 |
embryonic cell | 9.75e-11 | 250 |
endo-epithelial cell | 3.53e-10 | 42 |
epithelial cell of lung | 4.04e-07 | 19 |
squamous epithelial cell | 4.25e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 4.18e-14 | 223 |
nervous system | 4.36e-09 | 89 |
ectoderm-derived structure | 2.05e-08 | 171 |
ectoderm | 2.05e-08 | 171 |
presumptive ectoderm | 2.05e-08 | 171 |
central nervous system | 1.14e-07 | 81 |
cell layer | 3.77e-07 | 309 |
respiratory tract epithelium | 4.04e-07 | 19 |
lung epithelium | 4.04e-07 | 19 |
respiratory primordium | 4.21e-07 | 38 |
endoderm of foregut | 4.21e-07 | 38 |
epithelium | 5.11e-07 | 306 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.77e-45 | 235 |
disease of cellular proliferation | 8.97e-44 | 239 |
cell type cancer | 1.70e-31 | 143 |
carcinoma | 7.57e-26 | 106 |
organ system cancer | 1.51e-17 | 137 |
hematologic cancer | 1.44e-07 | 51 |
immune system cancer | 1.44e-07 | 51 |
myeloid leukemia | 2.94e-07 | 31 |
germ cell and embryonal cancer | 3.29e-07 | 22 |
germ cell cancer | 3.29e-07 | 22 |