FFCP PHASE1:Hg19::chr17:79478583..79478611,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=71 | |EntrezGene=71 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=144 | |HGNC=144 | ||
|TSSclassifier=strong | |||
|UniProt=P63261 | |UniProt=P63261 | ||
|association_with_transcript=0bp_to_M16247_5end | |association_with_transcript=0bp_to_M16247_5end | ||
|cluster_id=chr17:79478583..79478611,- | |||
|coexpression_cluster_id=C845 | |coexpression_cluster_id=C845 | ||
|description=CAGE_peak_7_at_ACTG1_5end | |description=CAGE_peak_7_at_ACTG1_5end | ||
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|ontology_enrichment_celltype=CL:0000055!8.42e-18!180;CL:0000220!3.60e-16!246;CL:0002321!3.68e-16!248;CL:0000144!8.95e-16!625;CL:0002371!2.06e-15!591;CL:0000548!5.62e-15!679;CL:0000004!5.62e-15!679;CL:0000255!5.62e-15!679;CL:0000012!3.96e-14!682;CL:0000222!1.75e-12!119;CL:0000393!2.51e-10!60;CL:0000211!2.51e-10!60;CL:0000183!9.58e-10!59;CL:0000680!1.09e-08!57;CL:0000056!1.09e-08!57;CL:0000355!1.09e-08!57;CL:0000187!3.15e-08!54;CL:0000003!7.98e-08!722;CL:0000192!1.72e-07!42;CL:0000514!1.72e-07!42 | |ontology_enrichment_celltype=CL:0000055!8.42e-18!180;CL:0000220!3.60e-16!246;CL:0002321!3.68e-16!248;CL:0000144!8.95e-16!625;CL:0002371!2.06e-15!591;CL:0000548!5.62e-15!679;CL:0000004!5.62e-15!679;CL:0000255!5.62e-15!679;CL:0000012!3.96e-14!682;CL:0000222!1.75e-12!119;CL:0000393!2.51e-10!60;CL:0000211!2.51e-10!60;CL:0000183!9.58e-10!59;CL:0000680!1.09e-08!57;CL:0000056!1.09e-08!57;CL:0000355!1.09e-08!57;CL:0000187!3.15e-08!54;CL:0000003!7.98e-08!722;CL:0000192!1.72e-07!42;CL:0000514!1.72e-07!42 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.53e-16,250;CL:0000222,5.44e-13,121;CL:0000393,7.71e-11,61;CL:0000211,7.71e-11,61;CL:0000680,3.90e-09,58;CL:0000056,3.90e-09,58;CL:0000355,3.90e-09,58;CL:0000187,1.18e-08,55;CL:0000192,1.00e-07,43;CL:0000514,1.00e-07,43;CL:0002077,5.58e-07,34;CL:0000057,9.17e-07,76 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!6.80e-11!82;UBERON:0000914!8.57e-11!83;UBERON:0002329!8.57e-11!83;UBERON:0003077!8.57e-11!83;UBERON:0003059!8.57e-11!83;UBERON:0007282!8.57e-11!83;UBERON:0009618!8.57e-11!83;UBERON:0007285!8.57e-11!83;UBERON:0005256!1.45e-10!143;UBERON:0002049!2.03e-10!79;UBERON:0007798!2.03e-10!79;UBERON:0001981!1.36e-09!60;UBERON:0007500!1.36e-09!60;UBERON:0004537!1.36e-09!60;UBERON:0006965!1.36e-09!60;UBERON:0004290!1.83e-09!70;UBERON:0000055!6.48e-09!69;UBERON:0000490!6.70e-09!138;UBERON:0001637!8.85e-09!42;UBERON:0003509!8.85e-09!42;UBERON:0004572!8.85e-09!42;UBERON:0002100!1.01e-08!216;UBERON:0003914!1.74e-08!118;UBERON:0004872!2.05e-08!84;UBERON:0001134!1.54e-07!61;UBERON:0002036!1.54e-07!61;UBERON:0003082!1.54e-07!61;UBERON:0002385!1.57e-07!63;UBERON:0001015!1.57e-07!63;UBERON:0000383!1.57e-07!63 | |ontology_enrichment_uberon=UBERON:0000486!6.80e-11!82;UBERON:0000914!8.57e-11!83;UBERON:0002329!8.57e-11!83;UBERON:0003077!8.57e-11!83;UBERON:0003059!8.57e-11!83;UBERON:0007282!8.57e-11!83;UBERON:0009618!8.57e-11!83;UBERON:0007285!8.57e-11!83;UBERON:0005256!1.45e-10!143;UBERON:0002049!2.03e-10!79;UBERON:0007798!2.03e-10!79;UBERON:0001981!1.36e-09!60;UBERON:0007500!1.36e-09!60;UBERON:0004537!1.36e-09!60;UBERON:0006965!1.36e-09!60;UBERON:0004290!1.83e-09!70;UBERON:0000055!6.48e-09!69;UBERON:0000490!6.70e-09!138;UBERON:0001637!8.85e-09!42;UBERON:0003509!8.85e-09!42;UBERON:0004572!8.85e-09!42;UBERON:0002100!1.01e-08!216;UBERON:0003914!1.74e-08!118;UBERON:0004872!2.05e-08!84;UBERON:0001134!1.54e-07!61;UBERON:0002036!1.54e-07!61;UBERON:0003082!1.54e-07!61;UBERON:0002385!1.57e-07!63;UBERON:0001015!1.57e-07!63;UBERON:0000383!1.57e-07!63 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p7@ACTG1 | |short_description=p7@ACTG1 | ||
}} | }} |
Latest revision as of 07:18, 18 September 2015
Short description: | p7@ACTG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ACTG1_5end |
Coexpression cluster: | C845_Alveolar_Hair_Olfactory_Osteoblast_Endothelial_Fibroblast_Smooth |
Association with transcript: | 0bp_to_M16247_5end |
EntrezGene: | ACTG1 |
HGNC: | 144 |
UniProt: | P63261 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.53e-16 | 250 |
mesodermal cell | 5.44e-13 | 121 |
electrically responsive cell | 7.71e-11 | 61 |
electrically active cell | 7.71e-11 | 61 |
muscle precursor cell | 3.90e-09 | 58 |
myoblast | 3.90e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.90e-09 | 58 |
muscle cell | 1.18e-08 | 55 |
smooth muscle cell | 1.00e-07 | 43 |
smooth muscle myoblast | 1.00e-07 | 43 |
ecto-epithelial cell | 5.58e-07 | 34 |
fibroblast | 9.17e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 5.01e-12 | 78 |
multilaminar epithelium | 5.90e-11 | 83 |
unilaminar epithelium | 1.18e-10 | 148 |
vasculature | 1.56e-10 | 78 |
vascular system | 1.56e-10 | 78 |
somite | 1.02e-09 | 71 |
presomitic mesoderm | 1.02e-09 | 71 |
presumptive segmental plate | 1.02e-09 | 71 |
dermomyotome | 1.02e-09 | 71 |
trunk paraxial mesoderm | 1.02e-09 | 71 |
epithelial tube open at both ends | 1.02e-09 | 59 |
blood vessel | 1.02e-09 | 59 |
blood vasculature | 1.02e-09 | 59 |
vascular cord | 1.02e-09 | 59 |
dense mesenchyme tissue | 1.22e-09 | 73 |
paraxial mesoderm | 3.08e-09 | 72 |
presumptive paraxial mesoderm | 3.08e-09 | 72 |
vessel | 3.36e-09 | 68 |
artery | 3.77e-09 | 42 |
arterial blood vessel | 3.77e-09 | 42 |
arterial system | 3.77e-09 | 42 |
trunk mesenchyme | 8.74e-09 | 122 |
epithelial tube | 1.07e-08 | 117 |
splanchnic layer of lateral plate mesoderm | 1.97e-08 | 83 |
mesenchyme | 6.62e-08 | 160 |
entire embryonic mesenchyme | 6.62e-08 | 160 |
skeletal muscle tissue | 8.81e-08 | 62 |
striated muscle tissue | 8.81e-08 | 62 |
myotome | 8.81e-08 | 62 |
muscle tissue | 1.15e-07 | 64 |
musculature | 1.15e-07 | 64 |
musculature of body | 1.15e-07 | 64 |
trunk | 1.93e-07 | 199 |