FFCP PHASE1:Hg19::chr17:79479327..79479332,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=71 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=144 | |||
|TSSclassifier=strong | |||
|UniProt=Q6PJ43 | |||
|association_with_transcript=-151bp_to_uc002kai.1_5end | |||
|cluster_id=chr17:79479327..79479332,- | |||
|description=CAGE_peak_14_at_ACTG1_5end | |||
|id=chr17:79479327..79479332,- | |||
|ontology_enrichment_celltype=CL:0002321!1.49e-10!248;CL:0000220!2.31e-10!246;CL:0000222!1.69e-08!119;CL:0000055!2.26e-07!180;CL:0000066!6.70e-07!254;CL:0000393!9.24e-07!60;CL:0000211!9.24e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.38e-08;32!CL:0000192;2.67e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,8.53e-11,250;CL:0000222,1.36e-10,121;CL:0000192,8.39e-10,43;CL:0000514,8.39e-10,43;CL:0000359,2.69e-09,32;CL:0000393,6.66e-09,61;CL:0000211,6.66e-09,61;CL:0000680,3.82e-08,58;CL:0000056,3.82e-08,58;CL:0000355,3.82e-08,58;CL:0000187,4.12e-08,55 | |||
|ontology_enrichment_development_v019=CL:0000514;2.67e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.65e-09!79;UBERON:0007798!2.65e-09!79;UBERON:0001637!4.16e-09!42;UBERON:0003509!4.16e-09!42;UBERON:0004572!4.16e-09!42;UBERON:0001981!9.77e-09!60;UBERON:0007500!9.77e-09!60;UBERON:0004537!9.77e-09!60;UBERON:0006965!9.77e-09!60;UBERON:0000055!2.87e-08!69;UBERON:0003914!5.50e-08!118;UBERON:0004872!1.13e-07!84;UBERON:0005256!1.28e-07!143;UBERON:0000490!3.79e-07!138;UBERON:0004535!3.90e-07!110;UBERON:0001009!7.70e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.87e-07;42!UBERON:0003509;1.87e-07;42!UBERON:0004572;1.87e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.68e-11,78;UBERON:0007798,1.68e-11,78;UBERON:0001637,7.47e-11,42;UBERON:0003509,7.47e-11,42;UBERON:0004572,7.47e-11,42;UBERON:0000055,3.42e-10,68;UBERON:0007503,9.35e-10,78;UBERON:0007500,1.10e-09,59;UBERON:0001981,1.10e-09,59;UBERON:0004537,1.10e-09,59;UBERON:0006965,1.10e-09,59;UBERON:0007524,2.09e-08,73;UBERON:0004535,2.21e-08,109;UBERON:0004872,2.46e-08,83;UBERON:0002329,4.79e-08,71;UBERON:0003059,4.79e-08,71;UBERON:0007282,4.79e-08,71;UBERON:0004290,4.79e-08,71;UBERON:0009618,4.79e-08,71;UBERON:0004573,6.06e-08,33;UBERON:0004571,6.06e-08,33;UBERON:0001134,6.84e-08,62;UBERON:0002036,6.84e-08,62;UBERON:0003082,6.84e-08,62;UBERON:0001009,7.44e-08,112;UBERON:0003077,8.15e-08,72;UBERON:0007285,8.15e-08,72;UBERON:0002385,2.10e-07,64;UBERON:0001015,2.10e-07,64;UBERON:0000383,2.10e-07,64;UBERON:0005256,6.18e-07,122;UBERON:0003914,7.25e-07,117 | |||
|phase1_expression=0.54503513781167,1.92690471501885,0.563817616383885,0,0,0,2.53299878168311,0,0.522371256399677,0.737201809504527,4.18680700783456,0.655324116390517,1.31883489114227,0.495065411840187,0.994192127183747,1.34465029290355,2.41077811209591,1.46062018077475,2.43966399395253,0,1.02000345622126,2.19418305034661,0,1.77936752594749,1.38096903554283,0.916960868975415,0.410502947249729,1.02324015707783,0.393364276848904,0,0.309632246632152,0.919421224478927,3.31326510656075,0.369754010166788,0.309868802321207,0,0,0,0.401088894940283,0.434021741431704,0,0,0,0.290796477559129,1.13362783106643,0.242584061187816,0.697287110717054,2.05583944010913,0.619412741790207,0.28769239232215,0.512321413058201,0.945928919554341,0.689491361473237,0,0,1.12945403725563,0.272906150057846,0,1.53041946185451,0.320929027076094,0.639337125799041,1.64925650093358,0.199463657621632,0,0.290209238628584,1.13477044938228,1.24564449799115,1.7587406567972,0.521482918420201,0.217188844705117,0,0,0,0.211255286311942,0,0.209658645508376,0,0.300353785683013,0.32145117339416,0,0.19891667719909,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0.382273228125229,1.32171328579026,0,0,0,0.786021525498329,0.822405995998037,0.334372990781356,0,0,0,0.445641827540694,0,0,0.270803863765016,0.640456598628376,0.650296737799391,1.15106533222573,0.276350017785848,0.289803085735052,0.14828656316206,0.535081656179426,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0.821127996921047,0,0.267440195783507,0.289648807765598,0,0,0.639312809217652,0.361439152384566,1.50401373190767,1.01392563272577,0,0.486634870302636,0.661743720148475,2.88248216701333,2.63504357079378,0.261958150995425,0,0.741568885568859,0.324547393654683,0.174129737299267,1.06366368415092,0,0,0,0.993812036833525,0.860234595106124,0.694281003215189,2.82653970962005,0.419499436209906,1.6507082516404,2.71693456497854,0,0.35576626268671,1.00416183829401,0,0.760272105718513,1.22031028774085,0.367663080345869,3.24056779152704,0.803697554556718,0.22452937262617,1.0135033243499,3.06633274931766,0,2.01521918323448,0,0,0.436094052142534,0.496971951695318,1.01304409331664,0.132409180813219,0.573673241497627,1.77334191099179,1.68203280042692,0,2.4666754841716,0.622422070799533,0.942974704487816,0.326923806226917,0.151357427644931,1.15235184896,0,0.312160076830321,0.570471821544449,1.34503812496621,0.704606991862589,0.323745888736263,0.702254033511242,0.408308342509787,1.10550885580591,0.929932030581889,0,1.7308685049499,0,2.87447256726495,0.336672227908132,0.625592599359821,0,0.438977620880838,4.90380473278431,1.80285670687916,0.907457465280168,0.538168907066586,0.213557388818567,0.211931901159562,1.20036438433761,0.412210116953756,0.515281080091258,0.37223371266318,0,0.487185025805993,0,0.552299391853796,0.484938170456436,0,0.604512589365842,0.169560592310488,0.193260853163297,0.818238361772504,0.286804595389004,0.853815942907168,0.530119073285941,0.464775771478074,0.829288440122964,0.756962552626885,0,1.56449532329816,5.14592750554308,0,1.39310378409594,1.44375896333917,1.53798840051797,1.01150814046861,0.482022059766964,1.43382164552112,1.30727666455444,0.949082476444386,1.34831308160164,0.98110732562673,1.53898862778556,0.738155454624648,4.20725321410337,0.4115740113314,0,0,0.982827216677626,0,0,0,0.514703430895577,0.98775256867763,0,1.40740561376283,0.370353780634118,0.325808305310325,0,1.44331342025273,0.695582429850461,0.70445216541493,1.01056513432752,0.462985512576611,1.52203321787679,0,0,0.246217006087397,0.234004265139238,1.0404181360211,0,0.503946384596579,0.708875486211932,0.0895585227028483,0,2.30029607499127,0.492663237895943,0,0,0,0,0.317489471460845,0,1.17217447210047,0,0.719792448923265,1.20137223137567,0.285826432630578,0.112131084345361,0,0.80672114403045,0.646358578788889,0,4.22651376278,0.26593811658487,1.04007436911366,0.514414748524284,1.41849132023278,0.799266537048298,0.428933980974443,0.542621605391443,1.64648067356154,0.65147236858747,0.355391948742546,0,0.602878754119172,0.871533458600294,1.3996218765488,0,0,0,0.718874566474748,0,0,0.868687840005475,1.84928690295345,0.895304816199478,0.672510863961164,0,0,0.256686072559497,0,0,0.773288812777695,0.837581326671744,4.46557126157214,0.749007023947182,0,0,0.858840442033979,2.50085260529839,0.271265023699736,1.87173775377726,5.70972764150918,2.20783381047509,2.34282829985426,0.902838299183157,0,0,0,1.29058417979192,0.868836144680828,0.587403472388222,0.343143423810856,0.206768026122887,0.431428401637234,0.533637789017222,0,1.66435439510497,1.20956117331872,0.496215615637554,0.460385919864187,1.96462066103151,0.512556597022804,1.53512174720011,1.12597744800525,0,2.00472601943452,1.59805552781814,0.410635780069046,1.03850885836724,1.27831416305955,0.604297247958111,2.00506470303285,0.460404944679482,0.459257792658427,0.546273504020151,1.70461739447251,0.902399225814824,0.924184045252977,0.784349769176855,2.92278449306521,0.949964660035881,0,0.510281115829547,1.72732732881711,4.62681758070868,0.270946437543853,2.50844886927427,0.2548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| |||
|short_description=p14@ACTG1 | |||
}} |
Latest revision as of 07:28, 18 September 2015
Short description: | p14@ACTG1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_ACTG1_5end |
Coexpression cluster: | NA |
Association with transcript: | -151bp_to_uc002kai.1_5end |
EntrezGene: | ACTG1 |
HGNC: | 144 |
UniProt: | Q6PJ43 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 8.53e-11 | 250 |
mesodermal cell | 1.36e-10 | 121 |
smooth muscle cell | 8.39e-10 | 43 |
smooth muscle myoblast | 8.39e-10 | 43 |
vascular associated smooth muscle cell | 2.69e-09 | 32 |
electrically responsive cell | 6.66e-09 | 61 |
electrically active cell | 6.66e-09 | 61 |
muscle precursor cell | 3.82e-08 | 58 |
myoblast | 3.82e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.82e-08 | 58 |
muscle cell | 4.12e-08 | 55 |
Ontology term | p-value | n |
---|---|---|
vasculature | 1.68e-11 | 78 |
vascular system | 1.68e-11 | 78 |
artery | 7.47e-11 | 42 |
arterial blood vessel | 7.47e-11 | 42 |
arterial system | 7.47e-11 | 42 |
vessel | 3.42e-10 | 68 |
epithelial vesicle | 9.35e-10 | 78 |
epithelial tube open at both ends | 1.10e-09 | 59 |
blood vessel | 1.10e-09 | 59 |
blood vasculature | 1.10e-09 | 59 |
vascular cord | 1.10e-09 | 59 |
dense mesenchyme tissue | 2.09e-08 | 73 |
cardiovascular system | 2.21e-08 | 109 |
splanchnic layer of lateral plate mesoderm | 2.46e-08 | 83 |
somite | 4.79e-08 | 71 |
presomitic mesoderm | 4.79e-08 | 71 |
presumptive segmental plate | 4.79e-08 | 71 |
dermomyotome | 4.79e-08 | 71 |
trunk paraxial mesoderm | 4.79e-08 | 71 |
systemic artery | 6.06e-08 | 33 |
systemic arterial system | 6.06e-08 | 33 |
skeletal muscle tissue | 6.84e-08 | 62 |
striated muscle tissue | 6.84e-08 | 62 |
myotome | 6.84e-08 | 62 |
circulatory system | 7.44e-08 | 112 |
paraxial mesoderm | 8.15e-08 | 72 |
presumptive paraxial mesoderm | 8.15e-08 | 72 |
muscle tissue | 2.10e-07 | 64 |
musculature | 2.10e-07 | 64 |
musculature of body | 2.10e-07 | 64 |
trunk mesenchyme | 6.18e-07 | 122 |
epithelial tube | 7.25e-07 | 117 |