FFCP PHASE1:Hg19::chr17:79479512..79479524,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=71 | |EntrezGene=71 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=144 | |HGNC=144 | ||
|TSSclassifier=strong | |||
|UniProt=P63261 | |UniProt=P63261 | ||
|association_with_transcript=-107bp_to_uc002kaj.1_5end | |association_with_transcript=-107bp_to_uc002kaj.1_5end | ||
|cluster_id=chr17:79479512..79479524,- | |||
|description=CAGE_peak_12_at_ACTG1_5end | |description=CAGE_peak_12_at_ACTG1_5end | ||
|id=chr17:79479512..79479524,- | |id=chr17:79479512..79479524,- | ||
|ontology_enrichment_celltype=CL:0000222!4.39e-21!119;CL:0000055!3.09e-16!180;CL:0000220!1.51e-15!246;CL:0002321!2.07e-15!248;CL:0000192!5.13e-15!42;CL:0000514!5.13e-15!42;CL:0000183!1.64e-13!59;CL:0000548!2.73e-13!679;CL:0000004!2.73e-13!679;CL:0000255!2.73e-13!679;CL:0000680!4.28e-13!57;CL:0000056!4.28e-13!57;CL:0000355!4.28e-13!57;CL:0000012!9.93e-13!682;CL:0000359!1.41e-12!32;CL:0000187!2.24e-12!54;CL:0000393!3.06e-10!60;CL:0000211!3.06e-10!60;CL:0000144!1.94e-09!625;CL:0000213!4.51e-09!57;CL:0000215!4.51e-09!57;CL:0000057!4.04e-08!75;CL:0002371!4.14e-08!591;CL:0000066!2.10e-07!254 | |ontology_enrichment_celltype=CL:0000222!4.39e-21!119;CL:0000055!3.09e-16!180;CL:0000220!1.51e-15!246;CL:0002321!2.07e-15!248;CL:0000192!5.13e-15!42;CL:0000514!5.13e-15!42;CL:0000183!1.64e-13!59;CL:0000548!2.73e-13!679;CL:0000004!2.73e-13!679;CL:0000255!2.73e-13!679;CL:0000680!4.28e-13!57;CL:0000056!4.28e-13!57;CL:0000355!4.28e-13!57;CL:0000012!9.93e-13!682;CL:0000359!1.41e-12!32;CL:0000187!2.24e-12!54;CL:0000393!3.06e-10!60;CL:0000211!3.06e-10!60;CL:0000144!1.94e-09!625;CL:0000213!4.51e-09!57;CL:0000215!4.51e-09!57;CL:0000057!4.04e-08!75;CL:0002371!4.14e-08!591;CL:0000066!2.10e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.11e-16;32!CL:0000192;2.34e-15;43!CL:0000187;1.66e-09;55!CL:0000393;3.70e-07;61!CL:0000211;3.70e-07;61!CL:0002539;8.41e-07;10 | |ontology_enrichment_celltype_v019=CL:0000359;1.11e-16;32!CL:0000192;2.34e-15;43!CL:0000187;1.66e-09;55!CL:0000393;3.70e-07;61!CL:0000211;3.70e-07;61!CL:0002539;8.41e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.22e-24,121;CL:0000192,2.80e-21,43;CL:0000514,2.80e-21,43;CL:0000359,2.28e-17,32;CL:0000680,2.91e-17,58;CL:0000056,2.91e-17,58;CL:0000355,2.91e-17,58;CL:0000187,1.56e-16,55;CL:0002321,1.18e-14,250;CL:0000393,1.75e-13,61;CL:0000211,1.75e-13,61;CL:0000213,1.13e-09,58;CL:0000215,1.13e-09,58;CL:0000057,2.78e-07,76;CL:0002539,7.85e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;2.34e-15;43!CL:0000355;7.19e-10;58!CL:0000222;2.45e-07;121 | |ontology_enrichment_development_v019=CL:0000514;2.34e-15;43!CL:0000355;7.19e-10;58!CL:0000222;2.45e-07;121 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!3.90e-18!79;UBERON:0007798!3.90e-18!79;UBERON:0000055!7.18e-15!69;UBERON:0002100!2.49e-14!216;UBERON:0001637!9.86e-14!42;UBERON:0003509!9.86e-14!42;UBERON:0004572!9.86e-14!42;UBERON:0005256!1.20e-13!143;UBERON:0003914!1.22e-13!118;UBERON:0001981!1.84e-13!60;UBERON:0007500!1.84e-13!60;UBERON:0004537!1.84e-13!60;UBERON:0006965!1.84e-13!60;UBERON:0004535!3.50e-13!110;UBERON:0003104!1.10e-12!238;UBERON:0009142!1.10e-12!238;UBERON:0001009!1.96e-12!113;UBERON:0000926!6.31e-12!448;UBERON:0004120!6.31e-12!448;UBERON:0006603!6.31e-12!448;UBERON:0000914!1.41e-11!83;UBERON:0002329!1.41e-11!83;UBERON:0003077!1.41e-11!83;UBERON:0003059!1.41e-11!83;UBERON:0007282!1.41e-11!83;UBERON:0009618!1.41e-11!83;UBERON:0007285!1.41e-11!83;UBERON:0001134!6.91e-11!61;UBERON:0002036!6.91e-11!61;UBERON:0003082!6.91e-11!61;UBERON:0004290!1.30e-10!70;UBERON:0000490!1.41e-10!138;UBERON:0004872!2.26e-10!84;UBERON:0004573!2.96e-10!33;UBERON:0004571!2.96e-10!33;UBERON:0002385!3.69e-10!63;UBERON:0001015!3.69e-10!63;UBERON:0000383!3.69e-10!63;UBERON:0000486!3.19e-09!82;UBERON:0000477!6.54e-09!286;UBERON:0000475!2.54e-08!365;UBERON:0000468!5.83e-08!659;UBERON:0000467!8.69e-08!625;UBERON:0000480!9.91e-08!626;UBERON:0000481!1.12e-07!347;UBERON:0000947!2.38e-07!21;UBERON:0010191!2.38e-07!21;UBERON:0001851!8.95e-07!16 | |ontology_enrichment_uberon=UBERON:0002049!3.90e-18!79;UBERON:0007798!3.90e-18!79;UBERON:0000055!7.18e-15!69;UBERON:0002100!2.49e-14!216;UBERON:0001637!9.86e-14!42;UBERON:0003509!9.86e-14!42;UBERON:0004572!9.86e-14!42;UBERON:0005256!1.20e-13!143;UBERON:0003914!1.22e-13!118;UBERON:0001981!1.84e-13!60;UBERON:0007500!1.84e-13!60;UBERON:0004537!1.84e-13!60;UBERON:0006965!1.84e-13!60;UBERON:0004535!3.50e-13!110;UBERON:0003104!1.10e-12!238;UBERON:0009142!1.10e-12!238;UBERON:0001009!1.96e-12!113;UBERON:0000926!6.31e-12!448;UBERON:0004120!6.31e-12!448;UBERON:0006603!6.31e-12!448;UBERON:0000914!1.41e-11!83;UBERON:0002329!1.41e-11!83;UBERON:0003077!1.41e-11!83;UBERON:0003059!1.41e-11!83;UBERON:0007282!1.41e-11!83;UBERON:0009618!1.41e-11!83;UBERON:0007285!1.41e-11!83;UBERON:0001134!6.91e-11!61;UBERON:0002036!6.91e-11!61;UBERON:0003082!6.91e-11!61;UBERON:0004290!1.30e-10!70;UBERON:0000490!1.41e-10!138;UBERON:0004872!2.26e-10!84;UBERON:0004573!2.96e-10!33;UBERON:0004571!2.96e-10!33;UBERON:0002385!3.69e-10!63;UBERON:0001015!3.69e-10!63;UBERON:0000383!3.69e-10!63;UBERON:0000486!3.19e-09!82;UBERON:0000477!6.54e-09!286;UBERON:0000475!2.54e-08!365;UBERON:0000468!5.83e-08!659;UBERON:0000467!8.69e-08!625;UBERON:0000480!9.91e-08!626;UBERON:0000481!1.12e-07!347;UBERON:0000947!2.38e-07!21;UBERON:0010191!2.38e-07!21;UBERON:0001851!8.95e-07!16 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;9.09e-13;42!UBERON:0003509;9.09e-13;42!UBERON:0004572;9.09e-13;42!UBERON:0002049;1.04e-11;75!UBERON:0007798;1.04e-11;75!UBERON:0007500;1.13e-11;56!UBERON:0001981;1.13e-11;56!UBERON:0004537;1.13e-11;56!UBERON:0004573;1.24e-11;33!UBERON:0004571;1.24e-11;33!UBERON:0003914;1.08e-10;74!UBERON:0000055;2.42e-09;65!UBERON:0000947;1.58e-08;21!UBERON:0010191;1.58e-08;21!UBERON:0001737;1.93e-07;9!UBERON:0001557;1.93e-07;9!UBERON:0001851;4.96e-07;15!UBERON:0004237;8.41e-07;10!UBERON:0004695;8.41e-07;10!UBERON:0002111;8.41e-07;10!UBERON:0004178;8.41e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0001637;9.09e-13;42!UBERON:0003509;9.09e-13;42!UBERON:0004572;9.09e-13;42!UBERON:0002049;1.04e-11;75!UBERON:0007798;1.04e-11;75!UBERON:0007500;1.13e-11;56!UBERON:0001981;1.13e-11;56!UBERON:0004537;1.13e-11;56!UBERON:0004573;1.24e-11;33!UBERON:0004571;1.24e-11;33!UBERON:0003914;1.08e-10;74!UBERON:0000055;2.42e-09;65!UBERON:0000947;1.58e-08;21!UBERON:0010191;1.58e-08;21!UBERON:0001737;1.93e-07;9!UBERON:0001557;1.93e-07;9!UBERON:0001851;4.96e-07;15!UBERON:0004237;8.41e-07;10!UBERON:0004695;8.41e-07;10!UBERON:0002111;8.41e-07;10!UBERON:0004178;8.41e-07;10 | ||
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|phase1_expression=1.2717486548939,1.07050261945492,1.55049844505568,2.00146596706261,1.78784437770915,0,0,0.631719873426831,0.261185628199839,4.66894479352867,4.18680700783456,0.655324116390517,2.90143676051299,0.618831764800233,1.32558950291166,3.36162573225888,0.602694528023977,4.38186054232424,4.87932798790507,1.35433163884467,0.816002764977012,1.88072832886853,0.286235987131057,0.684372125364421,0.251085279189606,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.393364276848904,0,0,2.75826367343678,1.204823675113,0.369754010166788,0,0.142169232487422,0.880801318004542,0.553995408531877,0.200544447470142,0,0,0,0,0.290796477559129,0,0,0.232429036905685,0.822335776043652,0.619412741790207,1.1507695692886,0,0,0,0,1.35426486594342,0.188242339542605,0,0.674170453335254,0.612167784741805,0,0,0.329851300186716,0.398927315243264,0,0.870627715885752,0,0.622822248995575,0.75374599577023,0,0,0.605399502633369,0,0,0.422510572623884,0,0.209658645508376,0.336985893439485,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0,0.294605907474837,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,4.87613732627923,0,0.255725123687061,1.44575660953827,1.00267582127178,1.44846518960824,0,0.486634870302636,1.03988298880475,1.77383517970051,1.84453049955565,0.523916301990851,0.364295288292542,0.370784442784429,0,0.870648686496336,0.531831842075461,0,0,0,2.58391129576717,0.860234595106124,0.347140501607594,1.69592382577203,3.77549492588915,1.37559020970034,0.835979866147242,0.775250277507987,2.84613010149368,0.33472061276467,1.20848795132744,2.28081631715554,9.03029612928227,1.83831540172934,5.67099363517232,0.803697554556718,1.12264686313085,0.337834441449967,1.53316637465883,0,1.46561395144326,0,0,0.436094052142534,0.496971951695318,1.64619665163954,5.03154887090231,1.14734648299525,1.41867352879343,2.80338800071154,4.2699598291882,4.44001587150888,1.55605517699883,0.808264032418128,0.490385709340376,1.05950199351452,1.15235184896,0.937285727335186,0.936480230490962,0,0.747243402759005,0.117434498643765,0,0.421352420106746,0,0.245668634623536,0.826606249406124,2.37600571456411,1.97813543422845,0.910161361938026,4.31170885089743,0,0.125118519871964,0.831192346452549,2.19488810440419,3.0648779579902,2.40380894250555,2.04177929688038,1.07633781413317,1.49490172172997,0.211931901159562,2.40072876867522,1.44273540933814,2.83404594050192,1.48893485065272,2.36286865137773,1.94874010322397,0.504867548488229,1.19664868234989,0.323292113637624,2.4850671476163,0.806016785821122,1.69560592310488,1.54608682530637,1.36373060295417,0.860413786167011,0.609868530647977,0.132529768321485,0.232387885739037,0.518305275076852,0.252320850875628,0,3.12899064659632,8.36213219650751,1.38134921352481,1.85747171212792,0.721879481669586,2.48444280083672,1.18009283054671,3.37415441836875,2.86764329104224,3.7039505495709,3.79632990577755,2.15730093056263,1.76599318612811,3.07797725557112,0,1.40241773803446,3.2925920906512,0,0,0,0.590789906681404,0,0,1.88724591328378,1.31700342490351,0,0.100528972411631,0.185176890317059,0,0,0,1.04337364477569,4.93116515790451,1.15493158208859,2.31492756288305,1.52203321787679,0.790204397959275,0,0,0.702012795417713,0.594524649154913,1.87467667973554,1.34385702559088,1.27597587518148,0.358234090811393,0.871901815541886,0.383382679165211,0,0.44024217006613,0.207328115540772,0.432359860250884,0.88369703398466,0.253991577168676,0,1.17217447210047,0,0.205654985406647,0.300343057843917,0,0.672786506072164,0.87192013766656,0.66004457238855,1.68053230485111,0,0,4.5209479819428,3.12022310734098,1.54324424557285,0,0.799266537048298,1.00084595560703,0,2.46972101034231,0.65147236858747,0.355391948742546,2.37585561880029,4.82303003295338,9.58686804460323,6.09835246210548,0,0,0,3.35474797688216,0,0,6.37037749337349,0.410952645100767,1.79060963239896,0.224170287987055,0,0.215627574859517,0.256686072559497,0,0,0,0.502548796003046,0,0,0,0,0.49076596687656,0.500170521059677,1.35632511849868,1.87173775377726,1.60586089917446,2.05013139544115,1.7571212248907,3.31040709700491,4.5481500811197,1.03473071292505,2.65690239414175,2.58116835958384,0.695068915744663,0.783204629850962,0.686286847621712,0,0,0.106727557803444,0,0,0,1.24053903909388,1.38115775959256,1.12264037773229,1.53766979106841,3.07024349440022,3.21707842287215,2.96836132889982,1.23367755042124,1.42049380250502,0.9033987161519,0.519254429183621,0.581051892299796,0,5.21316822788541,0.644566922551274,2.18147451512753,1.0925470080403,0.786746489756545,1.80479845162965,1.07821471946181,1.56869953835371,0,0.73886140225013,1.13733384070897,1.19065593693561,1.94324324491925,1.54227252690289,3.52230368807009,2.50844886927427,0.764628819135115,0.831076008928724,1.11937377361089,0,0,0.512900250232778,0.984043937099117,0,0.412164046590889,0.183138929636687,0.082509499920588,2.29706215198469,0,0,0.676695028044854,0.462145851343933,0.15350367472613,0.137836572484531,0.42968097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| ||
|short_description=p12@ACTG1 | |short_description=p12@ACTG1 | ||
}} | }} |
Latest revision as of 07:29, 18 September 2015
Short description: | p12@ACTG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ACTG1_5end |
Coexpression cluster: | NA |
Association with transcript: | -107bp_to_uc002kaj.1_5end |
EntrezGene: | ACTG1 |
HGNC: | 144 |
UniProt: | P63261 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.22e-24 | 121 |
smooth muscle cell | 2.80e-21 | 43 |
smooth muscle myoblast | 2.80e-21 | 43 |
vascular associated smooth muscle cell | 2.28e-17 | 32 |
muscle precursor cell | 2.91e-17 | 58 |
myoblast | 2.91e-17 | 58 |
multi-potent skeletal muscle stem cell | 2.91e-17 | 58 |
muscle cell | 1.56e-16 | 55 |
embryonic cell | 1.18e-14 | 250 |
electrically responsive cell | 1.75e-13 | 61 |
electrically active cell | 1.75e-13 | 61 |
lining cell | 1.13e-09 | 58 |
barrier cell | 1.13e-09 | 58 |
fibroblast | 2.78e-07 | 76 |
aortic smooth muscle cell | 7.85e-07 | 10 |