FFCP PHASE1:Hg19::chr11:5255696..5255724,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3045 | |EntrezGene=3045 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4829 | |HGNC=4829 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFT6,C9JRG0 | |UniProt=E9PFT6,C9JRG0 | ||
|association_with_transcript=0bp_to_ENST00000292901,ENST00000417377_5end | |association_with_transcript=0bp_to_ENST00000292901,ENST00000417377_5end | ||
|cluster_id=chr11:5255696..5255724,- | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_1_at_HBD_5end | |description=CAGE_peak_1_at_HBD_5end | ||
|id=chr11:5255696..5255724,- | |id=chr11:5255696..5255724,- | ||
|ontology_enrichment_celltype=CL:0000763!7.68e-08!112;CL:0000049!7.68e-08!112;CL:0000037!1.00e-06!172;CL:0000566!1.00e-06!172 | |ontology_enrichment_celltype=CL:0000763!7.68e-08!112;CL:0000049!7.68e-08!112;CL:0000037!1.00e-06!172;CL:0000566!1.00e-06!172 | ||
|ontology_enrichment_celltype_v019=CL:0000764;3.17e-07;2!CL:0000558;3.17e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.17e-07,2;CL:0000765,3.17e-07,2;CL:0000050,3.17e-07,2;CL:0000038,3.17e-07,2;CL:0000558,3.17e-07,2;CL:0000547,3.17e-07,2;CL:0000549,3.17e-07,2;CL:0000550,3.17e-07,2;CL:0000552,3.17e-07,2;CL:0000763,6.14e-07,108;CL:0000049,6.14e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0004872;3.65e-09;7 | |||
|ontology_enrichment_disease=DOID:8692!5.82e-08!31 | |ontology_enrichment_disease=DOID:8692!5.82e-08!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;2.52e-11;31!DOID:1036;9.67e-09;8!DOID:1240;2.85e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,7.67e-12,31;DOID:1240,8.71e-09,39;DOID:1036,9.61e-09,8;DOID:2531,3.89e-08,51;DOID:0060083,3.89e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.22e-21!115;UBERON:0000178!2.02e-13!15;UBERON:0000179!2.02e-13!15;UBERON:0000463!2.02e-13!15;UBERON:0002390!2.65e-08!102;UBERON:0003061!2.65e-08!102;UBERON:0002193!3.93e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.50e-21;15!UBERON:0000179;3.50e-21;15!UBERON:0000463;3.50e-21;15!UBERON:0002390;1.80e-15;32!UBERON:0002193;4.84e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.57e-21,15;UBERON:0000179,2.57e-21,15;UBERON:0000463,2.57e-21,15;UBERON:0007023,8.22e-17,114 | |||
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| 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| ||
|short_description=p1@HBD | |short_description=p1@HBD | ||
}} | }} |
Latest revision as of 07:39, 18 September 2015
Short description: | p1@HBD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HBD_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 0bp_to_ENST00000292901, ENST00000417377_5end |
EntrezGene: | HBD |
HGNC: | 4829 |
UniProt: | E9PFT6C9JRG0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.17e-07 | 2 |
erythroblast | 3.17e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 3.17e-07 | 2 |
erythroid progenitor cell | 3.17e-07 | 2 |
reticulocyte | 3.17e-07 | 2 |
proerythroblast | 3.17e-07 | 2 |
basophilic erythroblast | 3.17e-07 | 2 |
polychromatophilic erythroblast | 3.17e-07 | 2 |
orthochromatic erythroblast | 3.17e-07 | 2 |
myeloid cell | 6.14e-07 | 108 |
common myeloid progenitor | 6.14e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
blood | 2.57e-21 | 15 |
haemolymphatic fluid | 2.57e-21 | 15 |
organism substance | 2.57e-21 | 15 |
adult organism | 8.22e-17 | 114 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.67e-12 | 31 |
leukemia | 8.71e-09 | 39 |
chronic leukemia | 9.61e-09 | 8 |
hematologic cancer | 3.89e-08 | 51 |
immune system cancer | 3.89e-08 | 51 |