FFCP PHASE1:Hg19::chr21:39493611..39493629,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16707 | |HGNC=16707 | ||
|TSSclassifier=strong | |||
|UniProt=Q96T75 | |UniProt=Q96T75 | ||
|association_with_transcript=44bp_to_ENST00000357704,ENST00000400477,ENST00000465532,ENST00000469658,ENST00000495344_5end | |association_with_transcript=44bp_to_ENST00000357704,ENST00000400477,ENST00000465532,ENST00000469658,ENST00000495344_5end | ||
|cluster_id=chr21:39493611..39493629,+ | |||
|coexpression_cluster_id=C2631 | |||
|description=CAGE_peak_3_at_DSCR8_5end | |description=CAGE_peak_3_at_DSCR8_5end | ||
|id=chr21:39493611..39493629,+ | |id=chr21:39493611..39493629,+ | ||
|ontology_enrichment_celltype=CL:0000039!8.33e-12!7;CL:0000586!8.33e-12!7;CL:0002541!1.11e-10!3;CL:0000306!1.36e-07!4;CL:0002222!1.36e-07!4;CL:0002224!1.36e-07!4 | |ontology_enrichment_celltype=CL:0000039!8.33e-12!7;CL:0000586!8.33e-12!7;CL:0002541!1.11e-10!3;CL:0000306!1.36e-07!4;CL:0002222!1.36e-07!4;CL:0002224!1.36e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000039;9.55e-15;7!CL:0000586;9.55e-15;7!CL:0002541;3.61e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.16e-14,7;CL:0000586,1.16e-14,7;CL:0002541,2.87e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!1.26e-10!8;DOID:162!8.84e-08!235;DOID:14566!1.86e-07!239 | |ontology_enrichment_disease=DOID:1036!1.26e-10!8;DOID:162!8.84e-08!235;DOID:14566!1.86e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.52e-13;8!DOID:3095;5.88e-10;22!DOID:2994;5.88e-10;22!DOID:0060085;1.30e-07;1!DOID:3165;1.30e-07;1!DOID:0060121;1.30e-07;1!DOID:2438;1.30e-07;1!DOID:4418;1.30e-07;1!DOID:4960;2.24e-07;1!DOID:1799;2.24e-07;1!DOID:10165;2.24e-07;1!DOID:0070004;2.24e-07;1!DOID:1798;2.24e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.57e-13,8;DOID:162,3.91e-13,235;DOID:14566,9.34e-13,239;DOID:3095,6.23e-10,22;DOID:2994,6.23e-10,22;DOID:0050687,3.09e-09,143;DOID:2531,1.13e-08,51;DOID:0060083,1.13e-08,51;DOID:0060085,1.15e-07,1;DOID:3165,1.15e-07,1;DOID:0060121,1.15e-07,1;DOID:2438,1.15e-07,1;DOID:4418,1.15e-07,1;DOID:305,1.65e-07,106;DOID:1799,2.47e-07,1;DOID:10165,2.47e-07,1;DOID:1798,2.47e-07,1;DOID:4960,2.63e-07,1;DOID:0070004,2.63e-07,1;DOID:0050686,3.20e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.11e-10!3;UBERON:0000920!1.11e-10!3;UBERON:0007625!1.63e-09!11;UBERON:0000970!1.93e-08!20;UBERON:0002104!5.60e-08!21;UBERON:0003124!1.13e-07!7;UBERON:0005631!1.26e-07!14;UBERON:0000158!1.26e-07!14;UBERON:0001905!1.28e-07!2;UBERON:0002757!1.28e-07!2;UBERON:0010134!1.28e-07!2;UBERON:0002784!1.28e-07!2;UBERON:0005408!1.28e-07!2;UBERON:0001899!1.28e-07!2;UBERON:0010077!1.36e-07!4;UBERON:0005389!1.36e-07!4;UBERON:0000484!1.36e-07!4;UBERON:0002546!1.36e-07!4;UBERON:0000965!1.36e-07!4;UBERON:0001803!1.36e-07!4;UBERON:0003073!1.36e-07!4;UBERON:0005426!1.36e-07!4;UBERON:0000488!2.21e-07!4;UBERON:0001801!2.45e-07!14;UBERON:0000020!3.55e-07!23;UBERON:0003135!5.69e-07!11;UBERON:0000019!6.16e-07!19;UBERON:0000047!6.16e-07!19;UBERON:0004088!6.16e-07!19;UBERON:0003072!6.16e-07!19;UBERON:0003071!6.16e-07!19;UBERON:0004128!6.16e-07!19;UBERON:0001032!7.96e-07!24;UBERON:0004456!7.96e-07!24 | |ontology_enrichment_uberon=UBERON:0000476!1.11e-10!3;UBERON:0000920!1.11e-10!3;UBERON:0007625!1.63e-09!11;UBERON:0000970!1.93e-08!20;UBERON:0002104!5.60e-08!21;UBERON:0003124!1.13e-07!7;UBERON:0005631!1.26e-07!14;UBERON:0000158!1.26e-07!14;UBERON:0001905!1.28e-07!2;UBERON:0002757!1.28e-07!2;UBERON:0010134!1.28e-07!2;UBERON:0002784!1.28e-07!2;UBERON:0005408!1.28e-07!2;UBERON:0001899!1.28e-07!2;UBERON:0010077!1.36e-07!4;UBERON:0005389!1.36e-07!4;UBERON:0000484!1.36e-07!4;UBERON:0002546!1.36e-07!4;UBERON:0000965!1.36e-07!4;UBERON:0001803!1.36e-07!4;UBERON:0003073!1.36e-07!4;UBERON:0005426!1.36e-07!4;UBERON:0000488!2.21e-07!4;UBERON:0001801!2.45e-07!14;UBERON:0000020!3.55e-07!23;UBERON:0003135!5.69e-07!11;UBERON:0000019!6.16e-07!19;UBERON:0000047!6.16e-07!19;UBERON:0004088!6.16e-07!19;UBERON:0003072!6.16e-07!19;UBERON:0003071!6.16e-07!19;UBERON:0004128!6.16e-07!19;UBERON:0001032!7.96e-07!24;UBERON:0004456!7.96e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.62e-13;2!UBERON:0002757;2.62e-13;2!UBERON:0010134;2.62e-13;2!UBERON:0005408;2.62e-13;2!UBERON:0001899;2.62e-13;2!UBERON:0003124;3.61e-09;3!UBERON:0000920;3.61e-09;3!UBERON:0001282;5.77e-08;1!UBERON:0009842;5.77e-08;1!UBERON:0003704;5.77e-08;1!UBERON:0001171;5.77e-08;1!UBERON:0001172;5.77e-08;1!UBERON:0003296;4.40e-07;4!UBERON:0010133;4.40e-07;4!UBERON:0002784;4.40e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.20e-13,2;UBERON:0002757,4.20e-13,2;UBERON:0010134,4.20e-13,2;UBERON:0005408,4.20e-13,2;UBERON:0001899,4.20e-13,2;UBERON:0000920,2.87e-09,3;UBERON:0001282,5.96e-08,1;UBERON:0009842,5.96e-08,1;UBERON:0003704,5.96e-08,1;UBERON:0001171,5.96e-08,1;UBERON:0001172,5.96e-08,1;UBERON:0003296,5.55e-07,4;UBERON:0010133,5.55e-07,4;UBERON:0002784,5.55e-07,4 | |||
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| ||
|short_description=p3@DSCR8 | |short_description=p3@DSCR8 | ||
}} | }} |
Latest revision as of 09:26, 18 September 2015
Short description: | p3@DSCR8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DSCR8_5end |
Coexpression cluster: | C2631_chronic_pineal_gall_teratocarcinoma_testicular_choriocarcinoma_cholangiocellular |
Association with transcript: | 44bp_to_ENST00000357704, ENST00000400477, ENST00000465532, ENST00000469658, ENST00000495344_5end |
EntrezGene: | NA |
HGNC: | 16707 |
UniProt: | Q96T75 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.16e-14 | 7 |
germ cell | 1.16e-14 | 7 |
chorionic membrane mesenchymal stem cell | 2.87e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
pineal body | 4.20e-13 | 2 |
regional part of epithalamus | 4.20e-13 | 2 |
secretory circumventricular organ | 4.20e-13 | 2 |
circumventricular organ | 4.20e-13 | 2 |
epithalamus | 4.20e-13 | 2 |
egg chorion | 2.87e-09 | 3 |
intralobular bile duct | 5.96e-08 | 1 |
acinus | 5.96e-08 | 1 |
intrahepatic bile duct | 5.96e-08 | 1 |
portal lobule | 5.96e-08 | 1 |
hepatic acinus | 5.96e-08 | 1 |
gland of diencephalon | 5.55e-07 | 4 |
neuroendocrine gland | 5.55e-07 | 4 |
regional part of diencephalon | 5.55e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.57e-13 | 8 |
cancer | 3.91e-13 | 235 |
disease of cellular proliferation | 9.34e-13 | 239 |
germ cell and embryonal cancer | 6.23e-10 | 22 |
germ cell cancer | 6.23e-10 | 22 |
cell type cancer | 3.09e-09 | 143 |
hematologic cancer | 1.13e-08 | 51 |
immune system cancer | 1.13e-08 | 51 |
organ system benign neoplasm | 1.15e-07 | 1 |
skin benign neoplasm | 1.15e-07 | 1 |
integumentary system benign neoplasm | 1.15e-07 | 1 |
dermis tumor | 1.15e-07 | 1 |
cutaneous fibrous histiocytoma | 1.15e-07 | 1 |
carcinoma | 1.65e-07 | 106 |
islet cell tumor | 2.47e-07 | 1 |
endocrine pancreas cancer | 2.47e-07 | 1 |
pancreatic endocrine carcinoma | 2.47e-07 | 1 |
bone marrow cancer | 2.63e-07 | 1 |
myeloma | 2.63e-07 | 1 |
organ system cancer | 3.20e-07 | 137 |