FFCP PHASE1:Hg19::chr3:45984947..45984966,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10663 | |EntrezGene=10663 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16647 | |HGNC=16647 | ||
|TSSclassifier=strong | |||
|UniProt=O00574 | |UniProt=O00574 | ||
|association_with_transcript=0bp_to_ENST00000304552_5end | |association_with_transcript=0bp_to_ENST00000304552_5end | ||
|cluster_id=chr3:45984947..45984966,+ | |||
|coexpression_cluster_id=C300 | |coexpression_cluster_id=C300 | ||
|description=CAGE_peak_1_at_CXCR6_5end | |description=CAGE_peak_1_at_CXCR6_5end | ||
|id=chr3:45984947..45984966,+ | |id=chr3:45984947..45984966,+ | ||
|ontology_enrichment_celltype=CL:0000791!1.40e-19!18;CL:0000789!1.40e-19!18;CL:0002420!1.40e-19!18;CL:0002419!1.40e-19!18;CL:0000790!1.40e-19!18;CL:0000738!2.54e-18!140;CL:0000084!2.76e-17!25;CL:0000827!2.76e-17!25;CL:0000625!2.23e-15!11;CL:0002087!6.39e-15!119;CL:0002031!2.00e-13!124;CL:0000037!1.49e-11!172;CL:0000566!1.49e-11!172;CL:0002032!2.87e-10!165;CL:0000837!2.87e-10!165;CL:0000988!5.28e-10!182;CL:0002057!7.48e-10!42;CL:0000860!9.33e-09!45;CL:0000766!4.39e-08!76;CL:0000838!2.07e-07!52;CL:0000624!2.16e-07!6;CL:0002009!2.78e-07!65;CL:0000557!3.70e-07!71;CL:0000542!3.75e-07!53;CL:0000051!3.75e-07!53;CL:0002194!5.34e-07!63;CL:0000576!5.34e-07!63;CL:0000040!5.34e-07!63;CL:0000559!5.34e-07!63 | |ontology_enrichment_celltype=CL:0000791!1.40e-19!18;CL:0000789!1.40e-19!18;CL:0002420!1.40e-19!18;CL:0002419!1.40e-19!18;CL:0000790!1.40e-19!18;CL:0000738!2.54e-18!140;CL:0000084!2.76e-17!25;CL:0000827!2.76e-17!25;CL:0000625!2.23e-15!11;CL:0002087!6.39e-15!119;CL:0002031!2.00e-13!124;CL:0000037!1.49e-11!172;CL:0000566!1.49e-11!172;CL:0002032!2.87e-10!165;CL:0000837!2.87e-10!165;CL:0000988!5.28e-10!182;CL:0002057!7.48e-10!42;CL:0000860!9.33e-09!45;CL:0000766!4.39e-08!76;CL:0000838!2.07e-07!52;CL:0000624!2.16e-07!6;CL:0002009!2.78e-07!65;CL:0000557!3.70e-07!71;CL:0000542!3.75e-07!53;CL:0000051!3.75e-07!53;CL:0002194!5.34e-07!63;CL:0000576!5.34e-07!63;CL:0000040!5.34e-07!63;CL:0000559!5.34e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000625;3.83e-25;11!CL:0000791;1.11e-23;18!CL:0000789;1.11e-23;18!CL:0002419;1.11e-23;18!CL:0000084;3.08e-18;25!CL:0002619;2.24e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.84e-25,11;CL:0000791,9.06e-24,18;CL:0000789,9.06e-24,18;CL:0002420,9.06e-24,18;CL:0002419,9.06e-24,18;CL:0000790,9.06e-24,18;CL:0000084,3.35e-18,25;CL:0000827,3.35e-18,25;CL:0000738,7.25e-09,136;CL:0000838,8.10e-09,52;CL:0000542,1.43e-08,53;CL:0000051,1.43e-08,53;CL:0002087,1.46e-08,115;CL:0002619,2.20e-07,3;CL:0002031,3.71e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;1.11e-23;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.06e-37!115;UBERON:0002390!2.82e-13!102;UBERON:0003061!2.82e-13!102;UBERON:0002193!1.33e-12!112;UBERON:0000178!2.12e-09!15;UBERON:0000179!2.12e-09!15;UBERON:0000463!2.12e-09!15 | |ontology_enrichment_uberon=UBERON:0007023!7.06e-37!115;UBERON:0002390!2.82e-13!102;UBERON:0003061!2.82e-13!102;UBERON:0002193!1.33e-12!112;UBERON:0000178!2.12e-09!15;UBERON:0000179!2.12e-09!15;UBERON:0000463!2.12e-09!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.55e-14;15!UBERON:0000179;6.55e-14;15!UBERON:0000463;6.55e-14;15!UBERON:0002390;3.83e-10;32!UBERON:0002193;1.98e-07;42!UBERON:0004177;2.13e-07;5!UBERON:0005057;2.13e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.97e-19,114;UBERON:0000178,6.89e-14,15;UBERON:0000179,6.89e-14,15;UBERON:0000463,6.89e-14,15;UBERON:0002193,1.29e-08,108;UBERON:0002390,2.57e-08,98;UBERON:0003061,2.57e-08,98;UBERON:0004177,2.90e-08,7;UBERON:0005057,2.90e-08,7;UBERON:0003408,1.98e-07,10 | |||
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|short_description=p1@CXCR6 | |short_description=p1@CXCR6 | ||
}} | }} |
Latest revision as of 09:38, 18 September 2015
Short description: | p1@CXCR6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CXCR6_5end |
Coexpression cluster: | C300_CD4_CD8_NK_Natural_blood_mycosis_Basophils |
Association with transcript: | 0bp_to_ENST00000304552_5end |
EntrezGene: | CXCR6 |
HGNC: | 16647 |
UniProt: | O00574 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.84e-25 | 11 |
mature alpha-beta T cell | 9.06e-24 | 18 |
alpha-beta T cell | 9.06e-24 | 18 |
immature T cell | 9.06e-24 | 18 |
mature T cell | 9.06e-24 | 18 |
immature alpha-beta T cell | 9.06e-24 | 18 |
T cell | 3.35e-18 | 25 |
pro-T cell | 3.35e-18 | 25 |
leukocyte | 7.25e-09 | 136 |
lymphoid lineage restricted progenitor cell | 8.10e-09 | 52 |
lymphocyte | 1.43e-08 | 53 |
common lymphoid progenitor | 1.43e-08 | 53 |
nongranular leukocyte | 1.46e-08 | 115 |
adult endothelial progenitor cell | 2.20e-07 | 3 |
hematopoietic lineage restricted progenitor cell | 3.71e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.97e-19 | 114 |
blood | 6.89e-14 | 15 |
haemolymphatic fluid | 6.89e-14 | 15 |
organism substance | 6.89e-14 | 15 |
hemolymphoid system | 1.29e-08 | 108 |
hematopoietic system | 2.57e-08 | 98 |
blood island | 2.57e-08 | 98 |
hemopoietic organ | 2.90e-08 | 7 |
immune organ | 2.90e-08 | 7 |
gland of gut | 1.98e-07 | 10 |