FFCP PHASE1:Hg19::chr11:58345550..58345561,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:58345550..58345561,- to FFCP PHASE1:Hg19::chr11:58345550..58345561,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9404 | |EntrezGene=9404 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14061 | |HGNC=14061 | ||
|TSSclassifier=strong | |||
|UniProt=B4DV71 | |UniProt=B4DV71 | ||
|association_with_transcript=77bp_to_ENST00000528954,NM_001143995,uc010rkj.1_5end | |||
|cluster_id=chr11:58345550..58345561,- | |||
|description=CAGE_peak_6_at_LPXN_5end | |||
|id=chr11:58345550..58345561,- | |||
|ontology_enrichment_celltype=CL:0000738!3.87e-26!140;CL:0002031!2.41e-22!124;CL:0000037!6.20e-22!172;CL:0000566!6.20e-22!172;CL:0002087!3.30e-21!119;CL:0002032!9.94e-21!165;CL:0000837!9.94e-21!165;CL:0000988!1.84e-20!182;CL:0000766!4.41e-17!76;CL:0000839!2.07e-14!70;CL:0000557!1.08e-12!71;CL:0000763!4.18e-12!112;CL:0000049!4.18e-12!112;CL:0002194!1.38e-11!63;CL:0000576!1.38e-11!63;CL:0000040!1.38e-11!63;CL:0000559!1.38e-11!63;CL:0002009!4.29e-11!65;CL:0002057!1.24e-10!42;CL:0000860!2.41e-10!45;CL:0000838!7.97e-09!52;CL:0000542!8.83e-09!53;CL:0000051!8.83e-09!53;CL:0000791!5.16e-07!18;CL:0000789!5.16e-07!18;CL:0002420!5.16e-07!18;CL:0002419!5.16e-07!18;CL:0000790!5.16e-07!18;CL:0000134!6.67e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000094;2.69e-17;8!CL:0000081;3.60e-16;11!CL:0000766;3.02e-13;69!CL:0002393;1.25e-12;6!CL:0002397;1.25e-12;6!CL:0000624;1.03e-11;6!CL:0000576;4.52e-10;48!CL:0000767;1.24e-09;3!CL:0000623;1.24e-09;3!CL:0000860;3.41e-09;33!CL:0002057;3.41e-09;33!CL:0000791;8.04e-09;18!CL:0000789;8.04e-09;18!CL:0002419;8.04e-09;18!CL:0000738;1.26e-08;136!CL:0002087;3.01e-08;104!CL:0000473;3.59e-07;39!CL:0000234;3.59e-07;39!CL:0000771;6.05e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.25e-35,136;CL:0000766,6.41e-28,72;CL:0002032,1.96e-27,161;CL:0000837,1.96e-27,161;CL:0000037,2.86e-27,168;CL:0000988,9.01e-27,177;CL:0002031,7.32e-26,120;CL:0002087,4.49e-24,115;CL:0000094,1.90e-17,8;CL:0000763,2.84e-17,108;CL:0000049,2.84e-17,108;CL:0000839,8.78e-17,66;CL:0000557,1.91e-16,67;CL:0000081,2.58e-16,11;CL:0000860,7.81e-16,42;CL:0002057,7.81e-16,42;CL:0000473,5.30e-15,48;CL:0000234,5.30e-15,48;CL:0002194,4.23e-14,59;CL:0000576,4.23e-14,59;CL:0000040,4.23e-14,59;CL:0000559,4.23e-14,59;CL:0002009,1.77e-13,61;CL:0000624,5.93e-12,6;CL:0000838,5.72e-10,52;CL:0000134,7.90e-10,354;CL:0000767,9.53e-10,3;CL:0000542,1.04e-09,53;CL:0000051,1.04e-09,53;CL:0000623,1.96e-09,3;CL:0000825,1.96e-09,3;CL:0002320,2.12e-09,361;CL:0000791,5.52e-09,18;CL:0000789,5.52e-09,18;CL:0002420,5.52e-09,18;CL:0002419,5.52e-09,18;CL:0000790,5.52e-09,18;CL:0002393,3.76e-08,9;CL:0002397,3.76e-08,9;CL:0000219,6.72e-08,386;CL:0000771,6.56e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;3.52e-11;42!CL:0000790;8.04e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.44e-14!102;UBERON:0003061!1.44e-14!102;UBERON:0002371!2.68e-13!80;UBERON:0002193!3.07e-13!112;UBERON:0001474!1.02e-11!86;UBERON:0002405!2.64e-09!115;UBERON:0004765!1.14e-08!101;UBERON:0001434!1.14e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.53e-15,76;UBERON:0002390,3.88e-14,98;UBERON:0003061,3.88e-14,98;UBERON:0001474,1.26e-13,82;UBERON:0002405,1.52e-12,93;UBERON:0002193,3.36e-12,108;UBERON:0004765,6.91e-12,90;UBERON:0001434,4.09e-10,100;UBERON:0002384,2.05e-09,371 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0.261185628199839,0,0,0,0.527533956456907,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0.687720651731561,0.246301768349837,0.708397031823113,2.75354993794233,3.0706351847777,1.54816123316076,0.919421224478927,0,0.739508020333575,0.232401601740905,0.142169232487422,0.880801318004542,3.32397245119126,2.60707781711184,3.47217393145363,1.56740831967947,0.971680998056939,0.77272670290256,0.290796477559129,0.377875943688809,0,1.62700325833979,0.411167888021826,0.619412741790207,0.863077176966451,0.512321413058201,2.60130452877444,2.41321976515633,1.29096936716765,0,0.752969358170419,0,0.449446968890169,1.83650335422542,3.53021929783703,3.83602275479425,0,0.598390972864896,0,0.580418477257168,0,0.622822248995575,1.00499466102697,0,1.73751075764093,0,2.20966581592539,2.21523671208619,1.05627643155971,0.425208599930087,2.30624510059213,1.34794357375794,0.901061357049038,0.48217676009124,0.285012743741249,0.79566670879636,0.547992461293902,0,0.546138611262131,1.77901850772711,1.28019066769952,0.400395987036012,0,1.32208974556972,0,1.1384259382189,0.587237189370939,1.52909291250092,1.32171328579026,0.560508562981536,0.263384084775077,1.37696839079683,1.57204305099666,1.64481199199607,1.00311897234407,2.60737813306872,2.36723902867367,1.94826728407911,1.00269411196656,0.294605907474837,0.443067789167242,1.35401931882508,0.768547918354051,0.650296737799391,0.657751618414705,0.552700035571697,1.15921234294021,0.741432815810302,0,0,0.453237370790265,2.29932296161153,0.68725489096526,1.01207876807801,0.318565414324097,0.651083453856419,0.950452044448374,0.301150238155546,0.255973222308837,0,0.236777252044017,0.821127996921047,3.42731463482045,1.33720097891754,1.59306844271079,0,0,0,0,0,0,0.795285947051099,0,0,0.665188192387692,0.087834785693126,0.327447688744282,0,0,0.649094787309367,2.08955684759121,0.797747763113191,0,0.571994910780128,0,0,0,0,0.56530794192401,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0.367663080345869,0,0.0892997282840798,0.22452937262617,0,0,0,0,1.31780417436063,7.75560528296651,0,0,0.12663051166458,1.05927344650575,1.14734648299525,0,0,1.06748995729705,0.24666754841716,0.311211035399766,0.269421344139376,0.163461903113459,0.151357427644931,0.576175924479999,0.937285727335186,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0.61246251376468,0,0.103325781175765,0,0,0,0.718618141816238,0.168336113954066,0,0.277064115484183,0,0.30648779579902,0,0.113432183160021,0.358779271377724,0.213557388818567,0.211931901159562,0,0,0.515281080091258,0.37223371266318,0.337552664482532,0.292311015483596,0.757301322732344,0.276149695926898,0.161646056818812,0,0.302256294682921,0,0,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,2.76269842704961,0,0.721879481669586,0.118306800039844,0.168584690078102,0.241011029883482,0.220587945464788,0,0,0.539325232640658,0.196221465125346,0,0,0,0,0,2.53510069643662,0,0,0,0.860919069801795,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0,0,0.790204397959275,0,0.738651018262192,0.702012795417713,0.148631162288728,0,0,0,0.716468181622786,0,0,1.97065295158377,0.352193736052904,0.829312462163088,1.44119953416961,2.65109110195398,0.380987365753014,0,0,0,0.205654985406647,0.600686115687835,0.571652865261156,0,0,0.1466765716419,0.517086863031111,0,0,0.531876233169741,0,0.257207374262142,0,0.532844358032199,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.299918973546171,1.2162378064119,0.502257091432126,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0.336255431980582,2.56139988262505,1.07813787429759,3.20857590699371,0,0,0,0,0.637938751653163,2.24702107184155,0,1.65766205374414,0,0,0,0.207970861530807,0.535286966391485,0.630809660135739,0,0.300946099727719,0,0,0,0.368738337083406,0.173767228936166,0,0,0.620304078368662,2.15714200818617,0.960548020230999,1.81876542867756,0,0.907170879989041,0.248107807818777,0,0,0.256278298511402,0,0.321707842287215,0,0.308419387605311,0.177561725313127,0.0821271560138091,0,0,0.241718899183244,0,0.368323955743585,0,0.182091168006717,0.393373244878272,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0.438519753291869,0.784306353074702,0,0,0,0.412164046590889,0.0915694648183434,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0.214840489736547,0,0.0852266274161009,0,0.165284915360978,0.192190067365106,1.02090169995667,0.10115778085555,0,0,0.6970372701606,0.616067160352178,0,0,0.37064843820784,0,0.372158369359667,0.316379424718726,0,0,0,0.95460974377781,0,0.179872457583315,0,0,0.404364963146632,0,0,0,0,0,0.136499911407986,0,0,0.551365343546124,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0.349934720244983,0.192444225451024,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0.764637207142375,0.569647187174163,0,0.411362273086194,0,0,0,0.213648142254946,0,0,0.185803175125719,0.144269212976445,0.0711418433484141,0.318852545457645,0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| ||
|short_description=p6@LPXN | |||
}} | }} |
Latest revision as of 11:16, 18 September 2015
Short description: | p6@LPXN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LPXN_5end |
Coexpression cluster: | NA |
Association with transcript: | 77bp_to_ENST00000528954, NM_001143995, uc010rkj.1_5end |
EntrezGene: | LPXN |
HGNC: | 14061 |
UniProt: | B4DV71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.53e-15 | 76 |
hematopoietic system | 3.88e-14 | 98 |
blood island | 3.88e-14 | 98 |
bone element | 1.26e-13 | 82 |
immune system | 1.52e-12 | 93 |
hemolymphoid system | 3.36e-12 | 108 |
skeletal element | 6.91e-12 | 90 |
skeletal system | 4.09e-10 | 100 |
connective tissue | 2.05e-09 | 371 |