FFCP PHASE1:Hg19::chr16:89627836..89627840,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=606500 | |EntrezGene=606500 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=32729 | |HGNC=32729 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_002450,uc010cim.1_5end | |association_with_transcript=0bp_to_NR_002450,uc010cim.1_5end | ||
|cluster_id=chr16:89627836..89627840,+ | |||
|coexpression_cluster_id=C229 | |coexpression_cluster_id=C229 | ||
|description=CAGE_peak_2_at_SNORD68_5end | |description=CAGE_peak_2_at_SNORD68_5end | ||
|id=chr16:89627836..89627840,+ | |id=chr16:89627836..89627840,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.96e-12!115;UBERON:0001049!2.62e-11!57;UBERON:0005068!2.62e-11!57;UBERON:0006241!2.62e-11!57;UBERON:0007135!2.62e-11!57;UBERON:0002780!1.12e-09!41;UBERON:0001890!1.12e-09!41;UBERON:0006240!1.12e-09!41;UBERON:0003080!5.01e-09!42;UBERON:0001893!6.00e-09!34;UBERON:0002616!6.17e-09!59;UBERON:0002791!1.02e-08!33;UBERON:0002020!1.39e-08!34;UBERON:0003528!1.39e-08!34;UBERON:0002619!2.11e-08!22;UBERON:0001869!2.24e-08!32;UBERON:0001950!1.97e-07!20;UBERON:0002346!2.18e-07!90;UBERON:0000955!6.41e-07!69;UBERON:0006238!6.41e-07!69 | |ontology_enrichment_uberon=UBERON:0007023!1.96e-12!115;UBERON:0001049!2.62e-11!57;UBERON:0005068!2.62e-11!57;UBERON:0006241!2.62e-11!57;UBERON:0007135!2.62e-11!57;UBERON:0002780!1.12e-09!41;UBERON:0001890!1.12e-09!41;UBERON:0006240!1.12e-09!41;UBERON:0003080!5.01e-09!42;UBERON:0001893!6.00e-09!34;UBERON:0002616!6.17e-09!59;UBERON:0002791!1.02e-08!33;UBERON:0002020!1.39e-08!34;UBERON:0003528!1.39e-08!34;UBERON:0002619!2.11e-08!22;UBERON:0001869!2.24e-08!32;UBERON:0001950!1.97e-07!20;UBERON:0002346!2.18e-07!90;UBERON:0000955!6.41e-07!69;UBERON:0006238!6.41e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.07e-08;15!UBERON:0000179;3.07e-08;15!UBERON:0000463;3.07e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.65e-08,15;UBERON:0000179,1.65e-08,15;UBERON:0000463,1.65e-08,15;UBERON:0001049,2.62e-08,56;UBERON:0005068,2.62e-08,56;UBERON:0006241,2.62e-08,56;UBERON:0007135,2.62e-08,56;UBERON:0000073,2.31e-07,53;UBERON:0002616,2.31e-07,53;UBERON:0002346,4.17e-07,86 | |||
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| ||
|short_description=p2@SNORD68 | |short_description=p2@SNORD68 | ||
}} | }} |
Latest revision as of 11:57, 18 September 2015
Short description: | p2@SNORD68 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SNORD68_5end |
Coexpression cluster: | C229_Mesenchymal_CD4_Melanocyte_acute_skeletal_left_heart |
Association with transcript: | 0bp_to_NR_002450, uc010cim.1_5end |
EntrezGene: | SNORD68 |
HGNC: | 32729 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 1.65e-08 | 15 |
haemolymphatic fluid | 1.65e-08 | 15 |
organism substance | 1.65e-08 | 15 |
neural tube | 2.62e-08 | 56 |
neural rod | 2.62e-08 | 56 |
future spinal cord | 2.62e-08 | 56 |
neural keel | 2.62e-08 | 56 |
regional part of nervous system | 2.31e-07 | 53 |
regional part of brain | 2.31e-07 | 53 |
neurectoderm | 4.17e-07 | 86 |