FFCP PHASE1:Hg19::chr6:36098264..36098331,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5603 | |EntrezGene=5603 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6875 | |HGNC=6875 | ||
|TSSclassifier=strong | |||
|UniProt=Q5U4A5 | |UniProt=Q5U4A5 | ||
|association_with_transcript=0bp_to_ENST00000373766_5end | |association_with_transcript=0bp_to_ENST00000373766_5end | ||
|cluster_id=chr6:36098264..36098331,+ | |||
|description=CAGE_peak_1_at_MAPK13_5end | |description=CAGE_peak_1_at_MAPK13_5end | ||
|id=chr6:36098264..36098331,+ | |id=chr6:36098264..36098331,+ | ||
|ontology_enrichment_celltype=CL:0002076!5.98e-09!43;CL:0000542!1.83e-07!53;CL:0000051!1.83e-07!53;CL:0002368!2.00e-07!13;CL:0000838!2.52e-07!52;CL:0000791!4.01e-07!18;CL:0000789!4.01e-07!18;CL:0002420!4.01e-07!18;CL:0002419!4.01e-07!18;CL:0000790!4.01e-07!18;CL:0000223!8.08e-07!59 | |ontology_enrichment_celltype=CL:0002076!5.98e-09!43;CL:0000542!1.83e-07!53;CL:0000051!1.83e-07!53;CL:0002368!2.00e-07!13;CL:0000838!2.52e-07!52;CL:0000791!4.01e-07!18;CL:0000789!4.01e-07!18;CL:0002420!4.01e-07!18;CL:0002419!4.01e-07!18;CL:0000790!4.01e-07!18;CL:0000223!8.08e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.17e-08;42!CL:0002368;4.78e-08;13!CL:0000791;1.74e-07;18!CL:0000789;1.74e-07;18!CL:0002419;1.74e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,5.12e-10,42;CL:0000542,2.01e-08,53;CL:0000051,2.01e-08,53;CL:0000838,2.84e-08,52;CL:0002368,5.05e-08,13;CL:0000223,8.54e-08,58;CL:0000791,1.78e-07,18;CL:0000789,1.78e-07,18;CL:0002420,1.78e-07,18;CL:0002419,1.78e-07,18;CL:0000790,1.78e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;1.74e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!1.74e-10!126;UBERON:0000464!2.20e-10!104;UBERON:0004119!8.33e-10!169;UBERON:0000925!8.33e-10!169;UBERON:0006595!8.33e-10!169;UBERON:0001007!4.68e-08!155;UBERON:0001555!4.68e-08!155;UBERON:0007026!4.68e-08!155;UBERON:0005911!2.22e-07!82;UBERON:0004921!6.01e-07!129;UBERON:0004185!6.01e-07!129;UBERON:0000058!7.99e-07!26 | |ontology_enrichment_uberon=UBERON:0000466!1.74e-10!126;UBERON:0000464!2.20e-10!104;UBERON:0004119!8.33e-10!169;UBERON:0000925!8.33e-10!169;UBERON:0006595!8.33e-10!169;UBERON:0001007!4.68e-08!155;UBERON:0001555!4.68e-08!155;UBERON:0007026!4.68e-08!155;UBERON:0005911!2.22e-07!82;UBERON:0004921!6.01e-07!129;UBERON:0004185!6.01e-07!129;UBERON:0000058!7.99e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;7.84e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.43e-12,160;UBERON:0000925,2.43e-12,160;UBERON:0006595,2.43e-12,160;UBERON:0001007,2.67e-10,145;UBERON:0001555,2.67e-10,145;UBERON:0007026,2.67e-10,145;UBERON:0004921,4.63e-10,118;UBERON:0005911,1.87e-07,82;UBERON:0005178,4.74e-07,34;UBERON:0002224,4.74e-07,34;UBERON:0001004,8.68e-07,74 | |||
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| ||
|short_description=p1@MAPK13 | |short_description=p1@MAPK13 | ||
}} | }} |
Latest revision as of 11:58, 18 September 2015
Short description: | p1@MAPK13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MAPK13_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000373766_5end |
EntrezGene: | MAPK13 |
HGNC: | 6875 |
UniProt: | Q5U4A5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 5.12e-10 | 42 |
lymphocyte | 2.01e-08 | 53 |
common lymphoid progenitor | 2.01e-08 | 53 |
lymphoid lineage restricted progenitor cell | 2.84e-08 | 52 |
respiratory epithelial cell | 5.05e-08 | 13 |
endodermal cell | 8.54e-08 | 58 |
mature alpha-beta T cell | 1.78e-07 | 18 |
alpha-beta T cell | 1.78e-07 | 18 |
immature T cell | 1.78e-07 | 18 |
mature T cell | 1.78e-07 | 18 |
immature alpha-beta T cell | 1.78e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.43e-12 | 160 |
endoderm | 2.43e-12 | 160 |
presumptive endoderm | 2.43e-12 | 160 |
digestive system | 2.67e-10 | 145 |
digestive tract | 2.67e-10 | 145 |
primitive gut | 2.67e-10 | 145 |
subdivision of digestive tract | 4.63e-10 | 118 |
endo-epithelium | 1.87e-07 | 82 |
thoracic cavity element | 4.74e-07 | 34 |
thoracic cavity | 4.74e-07 | 34 |
respiratory system | 8.68e-07 | 74 |