FFCP PHASE1:Hg19::chr4:73434498..73434509,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9508 | |EntrezGene=9508 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=219 | |HGNC=219 | ||
|TSSclassifier=strong | |||
|UniProt=O15072,B7Z2U9,Q96AY5 | |UniProt=O15072,B7Z2U9,Q96AY5 | ||
|association_with_transcript=6bp_to_ENST00000286657,NM_014243,uc003hgk.1_5end | |association_with_transcript=6bp_to_ENST00000286657,NM_014243,uc003hgk.1_5end | ||
|cluster_id=chr4:73434498..73434509,- | |||
|description=CAGE_peak_6_at_ADAMTS3_5end | |description=CAGE_peak_6_at_ADAMTS3_5end | ||
|id=chr4:73434498..73434509,- | |id=chr4:73434498..73434509,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;6.30e-26;2!CL:0002363;6.30e-26;2!CL:0000097;3.10e-11;5!CL:0000138;1.38e-09;6!CL:0000153;8.14e-07;9!CL:0000447;8.14e-07;9!CL:0000163;8.14e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,9.18e-26,2;CL:0000008,9.18e-26,2;CL:0000097,2.94e-11,5;CL:0002028,2.94e-11,5;CL:0000058,1.44e-09,6;CL:0000138,1.44e-09,6;CL:0000047,1.49e-07,8;CL:0000163,7.91e-07,9;CL:0000153,8.37e-07,9;CL:0000447,8.37e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000008;6.30e-26;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;3.10e-50;1!DOID:4549;3.10e-50;1!DOID:5861;3.10e-50;1!DOID:6496;3.10e-50;1!DOID:201;1.38e-09;6!DOID:0060100;1.38e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,3.99e-50,1;DOID:4549,3.99e-50,1;DOID:5861,3.99e-50,1;DOID:6496,3.99e-50,1;DOID:201,1.44e-09,6;DOID:0060100,1.44e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0003075!1.10e-09!86;UBERON:0007284!1.10e-09!86;UBERON:0002346!5.37e-09!90;UBERON:0000073!6.31e-09!94;UBERON:0001016!6.31e-09!94;UBERON:0005743!1.30e-08!86;UBERON:0003056!1.72e-08!61;UBERON:0001017!2.11e-08!82;UBERON:0001869!2.30e-08!32;UBERON:0001950!2.60e-08!20;UBERON:0001893!9.93e-08!34;UBERON:0002046!1.13e-07!5;UBERON:0004117!1.13e-07!5;UBERON:0007689!1.13e-07!5;UBERON:0007123!1.13e-07!5;UBERON:0003091!1.13e-07!5;UBERON:0002619!2.00e-07!22;UBERON:0004121!2.67e-07!169;UBERON:0002780!3.47e-07!41;UBERON:0001890!3.47e-07!41;UBERON:0006240!3.47e-07!41;UBERON:0000924!5.88e-07!173;UBERON:0006601!5.88e-07!173;UBERON:0003080!5.98e-07!42;UBERON:0009722!8.25e-07!11;UBERON:0007690!8.25e-07!11 | |ontology_enrichment_uberon=UBERON:0003075!1.10e-09!86;UBERON:0007284!1.10e-09!86;UBERON:0002346!5.37e-09!90;UBERON:0000073!6.31e-09!94;UBERON:0001016!6.31e-09!94;UBERON:0005743!1.30e-08!86;UBERON:0003056!1.72e-08!61;UBERON:0001017!2.11e-08!82;UBERON:0001869!2.30e-08!32;UBERON:0001950!2.60e-08!20;UBERON:0001893!9.93e-08!34;UBERON:0002046!1.13e-07!5;UBERON:0004117!1.13e-07!5;UBERON:0007689!1.13e-07!5;UBERON:0007123!1.13e-07!5;UBERON:0003091!1.13e-07!5;UBERON:0002619!2.00e-07!22;UBERON:0004121!2.67e-07!169;UBERON:0002780!3.47e-07!41;UBERON:0001890!3.47e-07!41;UBERON:0006240!3.47e-07!41;UBERON:0000924!5.88e-07!173;UBERON:0006601!5.88e-07!173;UBERON:0003080!5.98e-07!42;UBERON:0009722!8.25e-07!11;UBERON:0007690!8.25e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0003566;6.30e-26;2!UBERON:0001777;6.30e-26;2!UBERON:0002418;8.69e-18;3!UBERON:0004755;8.69e-18;3!UBERON:0003891;1.06e-13;4!UBERON:0000964;1.06e-13;4!UBERON:0010409;1.06e-13;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003566,9.18e-26,2;UBERON:0001777,9.18e-26,2;UBERON:0002418,9.46e-18,3;UBERON:0004755,9.46e-18,3;UBERON:0003891,1.29e-13,4;UBERON:0000964,1.29e-13,4;UBERON:0010409,1.29e-13,4;UBERON:0004348,1.29e-13,4;UBERON:0005427,1.29e-13,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,1.47798971368783,0.352193736052904,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52456774533478,0,0,0.167516265334349,0.637938751653163,0,0,0,0.736148950314839,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0.994147647766298,0,0.222617410045812,0,0.211125408127993,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0.189753732724185,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0,1.3238419003725,0,0,0,0.633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485996453264197,0,0,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.1251909307065,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0.205116364240755,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0.781078098613847,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0.0679697329768317,0.197318320688547,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0.271965960763659,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0.112131862580613,0.12729431655633,0.202117188958219,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,1.47798971368783,0.352193736052904,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52456774533478,0,0,0.167516265334349,0.637938751653163,0,0,0,0.736148950314839,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0.994147647766298,0,0.222617410045812,0,0.211125408127993,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0.189753732724185,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0,1.3238419003725,0,0,0,0.633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485996453264197,0,0,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.1251909307065,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0.205116364240755,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0.781078098613847,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0.0679697329768317,0.197318320688547,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0.271965960763659,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0.112131862580613,0.12729431655633,0.202117188958219,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p6@ADAMTS3 | |short_description=p6@ADAMTS3 | ||
}} | }} |
Latest revision as of 12:13, 18 September 2015
Short description: | p6@ADAMTS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ADAMTS3_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_ENST00000286657, NM_014243, uc003hgk.1_5end |
EntrezGene: | ADAMTS3 |
HGNC: | 219 |
UniProt: | O15072B7Z2U9Q96AY5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 9.18e-26 | 2 |
migratory cranial neural crest cell | 9.18e-26 | 2 |
mast cell | 2.94e-11 | 5 |
basophil mast progenitor cell | 2.94e-11 | 5 |
chondroblast | 1.44e-09 | 6 |
chondrocyte | 1.44e-09 | 6 |
neuronal stem cell | 1.49e-07 | 8 |
endocrine cell | 7.91e-07 | 9 |
GAG secreting cell | 8.37e-07 | 9 |
carbohydrate secreting cell | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
head connective tissue | 9.18e-26 | 2 |
substantia propria of cornea | 9.18e-26 | 2 |
cartilage tissue | 9.46e-18 | 3 |
skeletal tissue | 9.46e-18 | 3 |
stroma | 1.29e-13 | 4 |
cornea | 1.29e-13 | 4 |
eye surface | 1.29e-13 | 4 |
optic eminence | 1.29e-13 | 4 |
corneal primordium | 1.29e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 3.99e-50 | 1 |
extraosseous chondrosarcoma | 3.99e-50 | 1 |
myxoid chondrosarcoma | 3.99e-50 | 1 |
extraskeletal myxoid chondrosarcoma | 3.99e-50 | 1 |
connective tissue cancer | 1.44e-09 | 6 |
musculoskeletal system cancer | 1.44e-09 | 6 |