FFCP PHASE1:Hg19::chr7:38316123..38316139,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=445347 | |EntrezGene=445347 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-204bp_to_uc003tgd.1_5end | |association_with_transcript=-204bp_to_uc003tgd.1_5end | ||
|cluster_id=chr7:38316123..38316139,- | |||
|description=CAGE_peak_4_at_TARP_5end | |description=CAGE_peak_4_at_TARP_5end | ||
|id=chr7:38316123..38316139,- | |id=chr7:38316123..38316139,- | ||
|ontology_enrichment_celltype=CL:0000037!5.36e-20!172;CL:0000566!5.36e-20!172;CL:0000988!5.22e-18!182;CL:0000763!8.11e-17!112;CL:0000049!8.11e-17!112;CL:0002032!1.95e-16!165;CL:0000837!1.95e-16!165;CL:0000625!4.06e-07!11;CL:0000623!4.55e-07!3;CL:0000825!4.55e-07!3 | |ontology_enrichment_celltype=CL:0000037!5.36e-20!172;CL:0000566!5.36e-20!172;CL:0000988!5.22e-18!182;CL:0000763!8.11e-17!112;CL:0000049!8.11e-17!112;CL:0002032!1.95e-16!165;CL:0000837!1.95e-16!165;CL:0000625!4.06e-07!11;CL:0000623!4.55e-07!3;CL:0000825!4.55e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000623;8.95e-15;3!CL:0000767;5.03e-14;3!CL:0000763;4.38e-09;100!CL:0000226;8.80e-07;3!CL:0000842;8.80e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.38e-23,168;CL:0000988,2.15e-21,177;CL:0002032,2.69e-19,161;CL:0000837,2.69e-19,161;CL:0000763,2.71e-19,108;CL:0000049,2.71e-19,108;CL:0000623,6.62e-15,3;CL:0000825,6.62e-15,3;CL:0000767,6.04e-14,3;CL:0000134,3.95e-07,354;CL:0002320,7.43e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000049;1.54e-07;108 | |||
|ontology_enrichment_disease=DOID:8692!8.45e-27!31;DOID:1240!6.84e-22!39;DOID:2531!5.31e-15!51;DOID:0060083!5.31e-15!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.36e-48;31!DOID:1240;1.97e-33;39!DOID:2531;5.62e-21;51!DOID:0060083;5.62e-21;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.05e-51,31;DOID:1240,2.62e-44,39;DOID:2531,9.62e-33,51;DOID:0060083,9.62e-33,51;DOID:0050686,3.76e-09,137 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.71e-14!115;UBERON:0000178!4.68e-09!15;UBERON:0000179!4.68e-09!15;UBERON:0000463!4.68e-09!15;UBERON:0002390!5.23e-08!102;UBERON:0003061!5.23e-08!102;UBERON:0002193!3.04e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002390;1.44e-16;32!UBERON:0000178;1.05e-13;15!UBERON:0000179;1.05e-13;15!UBERON:0000463;1.05e-13;15!UBERON:0002193;9.81e-10;42!UBERON:0004177;1.80e-08;5!UBERON:0005057;1.80e-08;5!UBERON:0002106;8.80e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.08e-13,15;UBERON:0000179,1.08e-13,15;UBERON:0000463,1.08e-13,15;UBERON:0004177,4.91e-10,7;UBERON:0005057,4.91e-10,7;UBERON:0002390,3.01e-09,98;UBERON:0003061,3.01e-09,98;UBERON:0002193,4.52e-08,108 | |||
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| ||
|short_description=p4@TARP | |short_description=p4@TARP | ||
}} | }} |
Latest revision as of 12:15, 18 September 2015
Short description: | p4@TARP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TARP_5end |
Coexpression cluster: | NA |
Association with transcript: | -204bp_to_uc003tgd.1_5end |
EntrezGene: | TARP |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 6.38e-23 | 168 |
hematopoietic cell | 2.15e-21 | 177 |
hematopoietic oligopotent progenitor cell | 2.69e-19 | 161 |
hematopoietic multipotent progenitor cell | 2.69e-19 | 161 |
myeloid cell | 2.71e-19 | 108 |
common myeloid progenitor | 2.71e-19 | 108 |
natural killer cell | 6.62e-15 | 3 |
pro-NK cell | 6.62e-15 | 3 |
basophil | 6.04e-14 | 3 |
mesenchymal cell | 3.95e-07 | 354 |
connective tissue cell | 7.43e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
blood | 1.08e-13 | 15 |
haemolymphatic fluid | 1.08e-13 | 15 |
organism substance | 1.08e-13 | 15 |
hemopoietic organ | 4.91e-10 | 7 |
immune organ | 4.91e-10 | 7 |
hematopoietic system | 3.01e-09 | 98 |
blood island | 3.01e-09 | 98 |
hemolymphoid system | 4.52e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.05e-51 | 31 |
leukemia | 2.62e-44 | 39 |
hematologic cancer | 9.62e-33 | 51 |
immune system cancer | 9.62e-33 | 51 |
organ system cancer | 3.76e-09 | 137 |