FFCP PHASE1:Hg19::chr8:55471706..55471714,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6101 | |EntrezGene=6101 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=10263 | |HGNC=10263 | ||
|TSSclassifier=strong | |||
|UniProt=E7EVW9 | |UniProt=E7EVW9 | ||
|association_with_transcript=-14bp_to_ENST00000427058_5end | |||
|cluster_id=chr8:55471706..55471714,+ | |||
|coexpression_cluster_id=C2293 | |||
|description=CAGE_peak_3_at_RP1_5end | |||
|id=chr8:55471706..55471714,+ | |||
|ontology_enrichment_celltype=CL:0000239!2.23e-09!3;CL:1000615!2.23e-09!3;CL:0002306!2.23e-09!3;CL:0002563!3.38e-07!4 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.11e-17;29!UBERON:0001041;4.34e-11;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4556;4.52e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,4.52e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000341!3.99e-14!2;UBERON:0003127!6.69e-14!2;UBERON:0006853!2.23e-09!3;UBERON:0007685!2.23e-09!3;UBERON:0004134!2.23e-09!3;UBERON:0005178!1.54e-08!34;UBERON:0002224!1.54e-08!34;UBERON:0005181!2.87e-08!35;UBERON:0002171!4.89e-08!1;UBERON:0006518!4.89e-08!1;UBERON:0008949!4.89e-08!1;UBERON:0000101!4.89e-08!1;UBERON:0002167!4.89e-08!1;UBERON:0002113!9.15e-08!27;UBERON:0003918!9.15e-08!27;UBERON:0005095!9.15e-08!27;UBERON:0007687!9.15e-08!27;UBERON:0005153!1.09e-07!37;UBERON:0008947!1.52e-07!38;UBERON:0003258!1.52e-07!38;UBERON:0005177!1.70e-07!107;UBERON:0006834!2.17e-07!1;UBERON:0001301!2.47e-07!1;UBERON:0002048!2.97e-07!22;UBERON:0000117!2.97e-07!22;UBERON:0000171!2.97e-07!22;UBERON:0000170!2.97e-07!22;UBERON:0005597!2.97e-07!22;UBERON:0000118!2.97e-07!22;UBERON:0001242!3.38e-07!4;UBERON:0001262!3.38e-07!4;UBERON:0004786!3.38e-07!4;UBERON:0004808!3.38e-07!4;UBERON:0001277!3.38e-07!4;UBERON:0009569!5.74e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;6.70e-40;2!UBERON:0002171;2.30e-21;1!UBERON:0006518;2.30e-21;1!UBERON:0008949;2.30e-21;1!UBERON:0000101;2.30e-21;1!UBERON:0002167;2.30e-21;1!UBERON:0002048;5.56e-15;22!UBERON:0000117;5.56e-15;22!UBERON:0000171;5.56e-15;22!UBERON:0000170;5.56e-15;22!UBERON:0000974;4.84e-14;6!UBERON:0005178;8.41e-13;34!UBERON:0002224;8.41e-13;34!UBERON:0003127;2.73e-11;2!UBERON:0005181;7.09e-10;35!UBERON:0000065;8.30e-09;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,4.49e-40,2;UBERON:0002171,2.30e-21,1;UBERON:0006518,2.30e-21,1;UBERON:0008949,2.30e-21,1;UBERON:0000101,2.30e-21,1;UBERON:0002167,2.30e-21,1;UBERON:0002048,5.57e-15,22;UBERON:0000117,5.57e-15,22;UBERON:0000171,5.57e-15,22;UBERON:0000170,5.57e-15,22;UBERON:0005597,5.57e-15,22;UBERON:0000118,5.57e-15,22;UBERON:0005178,6.96e-15,34;UBERON:0002224,6.96e-15,34;UBERON:0005181,1.83e-14,35;UBERON:0008947,2.47e-13,38;UBERON:0003258,2.47e-13,38;UBERON:0003127,2.47e-11,2;UBERON:0000915,8.93e-10,52;UBERON:0000065,2.04e-09,54;UBERON:0005153,4.71e-09,37;UBERON:0000974,7.66e-09,10;UBERON:0005157,3.45e-07,47;UBERON:0001004,6.96e-07,74 | |||
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|short_description=p3@RP1 | |||
}} | }} |
Latest revision as of 12:43, 18 September 2015
Short description: | p3@RP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RP1_5end |
Coexpression cluster: | C2293_large_lung_nonsmall_throat_trachea_bronchioalveolar_thyroid |
Association with transcript: | -14bp_to_ENST00000427058_5end |
EntrezGene: | RP1 |
HGNC: | 10263 |
UniProt: | E7EVW9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 4.49e-40 | 2 |
lower lobe of right lung | 2.30e-21 | 1 |
right lung lobe | 2.30e-21 | 1 |
lower lobe of lung | 2.30e-21 | 1 |
lobe of lung | 2.30e-21 | 1 |
right lung | 2.30e-21 | 1 |
lung | 5.57e-15 | 22 |
respiratory tube | 5.57e-15 | 22 |
respiration organ | 5.57e-15 | 22 |
pair of lungs | 5.57e-15 | 22 |
lung primordium | 5.57e-15 | 22 |
lung bud | 5.57e-15 | 22 |
thoracic cavity element | 6.96e-15 | 34 |
thoracic cavity | 6.96e-15 | 34 |
thoracic segment organ | 1.83e-14 | 35 |
respiratory primordium | 2.47e-13 | 38 |
endoderm of foregut | 2.47e-13 | 38 |
open tracheal system trachea | 2.47e-11 | 2 |
thoracic segment of trunk | 8.93e-10 | 52 |
respiratory tract | 2.04e-09 | 54 |
epithelial bud | 4.71e-09 | 37 |
neck | 7.66e-09 | 10 |
epithelial fold | 3.45e-07 | 47 |
respiratory system | 6.96e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 4.52e-08 | 3 |