FFCP PHASE1:Hg19::chr8:55471764..55471769,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6101 | |EntrezGene=6101 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=10263 | |HGNC=10263 | ||
|TSSclassifier=strong | |||
|UniProt=E7EVW9 | |UniProt=E7EVW9 | ||
|association_with_transcript=35bp_to_ENST00000427058_5end | |association_with_transcript=35bp_to_ENST00000427058_5end | ||
|cluster_id=chr8:55471764..55471769,+ | |||
|coexpression_cluster_id=C131 | |||
|description=CAGE_peak_5_at_RP1_5end | |description=CAGE_peak_5_at_RP1_5end | ||
|id=chr8:55471764..55471769,+ | |id=chr8:55471764..55471769,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.88e-21;29!UBERON:0001041;5.96e-10;30 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!1.53e-20!2;UBERON:0002171!2.79e-11!1;UBERON:0006518!2.79e-11!1;UBERON:0008949!2.79e-11!1;UBERON:0000101!2.79e-11!1;UBERON:0002167!2.79e-11!1;UBERON:0006122!4.58e-11!1;UBERON:0000974!3.50e-09!10;UBERON:0000065!3.24e-08!53;UBERON:0002048!2.43e-07!22;UBERON:0000117!2.43e-07!22;UBERON:0000171!2.43e-07!22;UBERON:0000170!2.43e-07!22;UBERON:0005597!2.43e-07!22;UBERON:0000118!2.43e-07!22;UBERON:0005178!4.30e-07!34;UBERON:0002224!4.30e-07!34;UBERON:0005181!6.94e-07!35 | |ontology_enrichment_uberon=UBERON:0000341!1.53e-20!2;UBERON:0002171!2.79e-11!1;UBERON:0006518!2.79e-11!1;UBERON:0008949!2.79e-11!1;UBERON:0000101!2.79e-11!1;UBERON:0002167!2.79e-11!1;UBERON:0006122!4.58e-11!1;UBERON:0000974!3.50e-09!10;UBERON:0000065!3.24e-08!53;UBERON:0002048!2.43e-07!22;UBERON:0000117!2.43e-07!22;UBERON:0000171!2.43e-07!22;UBERON:0000170!2.43e-07!22;UBERON:0005597!2.43e-07!22;UBERON:0000118!2.43e-07!22;UBERON:0005178!4.30e-07!34;UBERON:0002224!4.30e-07!34;UBERON:0005181!6.94e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.39e-66;1!UBERON:0006518;2.39e-66;1!UBERON:0008949;2.39e-66;1!UBERON:0000101;2.39e-66;1!UBERON:0002167;2.39e-66;1!UBERON:0003127;7.05e-34;2!UBERON:0005178;2.85e-14;34!UBERON:0002224;2.85e-14;34!UBERON:0002048;3.77e-13;22!UBERON:0000117;3.77e-13;22!UBERON:0000171;3.77e-13;22!UBERON:0000170;3.77e-13;22!UBERON:0000065;6.92e-12;44!UBERON:0005181;8.49e-11;35!UBERON:0003126;9.89e-11;7!UBERON:0001005;9.89e-11;7!UBERON:0000915;3.00e-09;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.39e-66,1;UBERON:0006518,2.39e-66,1;UBERON:0008949,2.39e-66,1;UBERON:0000101,2.39e-66,1;UBERON:0002167,2.39e-66,1;UBERON:0003127,7.05e-34,2;UBERON:0005178,1.78e-18,34;UBERON:0002224,1.78e-18,34;UBERON:0005181,5.55e-18,35;UBERON:0008947,1.18e-16,38;UBERON:0003258,1.18e-16,38;UBERON:0002048,3.77e-13,22;UBERON:0000117,3.77e-13,22;UBERON:0000171,3.77e-13,22;UBERON:0000170,3.77e-13,22;UBERON:0005597,3.77e-13,22;UBERON:0000118,3.77e-13,22;UBERON:0000915,1.77e-12,52;UBERON:0000065,4.68e-12,54;UBERON:0003126,9.89e-11,7;UBERON:0001005,9.89e-11,7;UBERON:0001004,4.40e-09,74;UBERON:0005153,2.82e-08,37;UBERON:0001041,7.10e-08,87;UBERON:0005177,6.45e-07,101;UBERON:0005157,9.72e-07,47 | |||
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|short_description=p5@RP1 | |short_description=p5@RP1 | ||
}} | }} |
Latest revision as of 12:45, 18 September 2015
Short description: | p5@RP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RP1_5end |
Coexpression cluster: | C131_lung_trachea_Alveolar_thyroid_umbilical_throat_skin |
Association with transcript: | 35bp_to_ENST00000427058_5end |
EntrezGene: | RP1 |
HGNC: | 10263 |
UniProt: | E7EVW9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.39e-66 | 1 |
right lung lobe | 2.39e-66 | 1 |
lower lobe of lung | 2.39e-66 | 1 |
lobe of lung | 2.39e-66 | 1 |
right lung | 2.39e-66 | 1 |
open tracheal system trachea | 7.05e-34 | 2 |
thoracic cavity element | 1.78e-18 | 34 |
thoracic cavity | 1.78e-18 | 34 |
thoracic segment organ | 5.55e-18 | 35 |
respiratory primordium | 1.18e-16 | 38 |
endoderm of foregut | 1.18e-16 | 38 |
lung | 3.77e-13 | 22 |
respiratory tube | 3.77e-13 | 22 |
respiration organ | 3.77e-13 | 22 |
pair of lungs | 3.77e-13 | 22 |
lung primordium | 3.77e-13 | 22 |
lung bud | 3.77e-13 | 22 |
thoracic segment of trunk | 1.77e-12 | 52 |
respiratory tract | 4.68e-12 | 54 |
trachea | 9.89e-11 | 7 |
respiratory airway | 9.89e-11 | 7 |
respiratory system | 4.40e-09 | 74 |
epithelial bud | 2.82e-08 | 37 |
foregut | 7.10e-08 | 87 |
trunk region element | 6.45e-07 | 101 |
epithelial fold | 9.72e-07 | 47 |