FFCP PHASE1:Hg19::chr1:169336965..169336970,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29922 | |EntrezGene=29922 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20461 | |HGNC=20461 | ||
|TSSclassifier=strong | |||
|UniProt=E9PNU1 | |UniProt=E9PNU1 | ||
|association_with_transcript=0bp_to_ENST00000528517_5end | |association_with_transcript=0bp_to_ENST00000528517_5end | ||
|cluster_id=chr1:169336965..169336970,- | |||
|description=CAGE_peak_5_at_NME7_5end | |description=CAGE_peak_5_at_NME7_5end | ||
|id=chr1:169336965..169336970,- | |id=chr1:169336965..169336970,- | ||
|ontology_enrichment_celltype=CL:0000084!8.76e-10!25;CL:0000827!8.76e-10!25;CL:0000624!3.24e-08!6;CL:0000838!3.79e-08!52;CL:0000542!7.44e-08!53;CL:0000051!7.44e-08!53;CL:0000791!4.72e-07!18;CL:0000789!4.72e-07!18;CL:0002420!4.72e-07!18;CL:0002419!4.72e-07!18;CL:0000790!4.72e-07!18 | |ontology_enrichment_celltype=CL:0000084!8.76e-10!25;CL:0000827!8.76e-10!25;CL:0000624!3.24e-08!6;CL:0000838!3.79e-08!52;CL:0000542!7.44e-08!53;CL:0000051!7.44e-08!53;CL:0000791!4.72e-07!18;CL:0000789!4.72e-07!18;CL:0002420!4.72e-07!18;CL:0002419!4.72e-07!18;CL:0000790!4.72e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.10e-19;25!CL:0000624;8.06e-18;6!CL:0000791;7.20e-17;18!CL:0000789;7.20e-17;18!CL:0002419;7.20e-17;18!CL:0000815;3.77e-14;2!CL:0000792;3.77e-14;2!CL:0002677;3.77e-14;2!CL:0000898;9.91e-10;3!CL:0000623;1.78e-09;3!CL:0000542;1.23e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,6.67e-20,25;CL:0000827,6.67e-20,25;CL:0000624,5.85e-18,6;CL:0000791,5.40e-17,18;CL:0000789,5.40e-17,18;CL:0002420,5.40e-17,18;CL:0002419,5.40e-17,18;CL:0000790,5.40e-17,18;CL:0000815,2.16e-14,2;CL:0000792,2.16e-14,2;CL:0002677,2.16e-14,2;CL:0000838,3.80e-13,52;CL:0000542,7.34e-13,53;CL:0000051,7.34e-13,53;CL:0000898,6.84e-10,3;CL:0000623,2.97e-09,3;CL:0000825,2.97e-09,3 | |||
|ontology_enrichment_development_v019=CL:0000790;7.20e-17;18!CL:0000051;1.23e-08;53 | |||
|ontology_enrichment_disease=DOID:162!2.39e-07!235;DOID:14566!3.42e-07!239 | |ontology_enrichment_disease=DOID:162!2.39e-07!235;DOID:14566!3.42e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:0060060;1.00e-07;1!DOID:0060061;1.00e-07;1!DOID:8691;1.00e-07;1!DOID:1749;1.77e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,4.99e-08,1;DOID:0060061,4.99e-08,1;DOID:8691,4.99e-08,1;DOID:1749,2.18e-07,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,0,0,0,0,0,0,0.142169232487422,0.587200878669695,0,0.200544447470142,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0.224723484445085,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0.954053754535364,0,0,0.764546456250458,1.32171328579026,0,0,1.37696839079683,0.393010762749165,3.49522548299166,0,1.95553359980154,1.89379122293893,1.94826728407911,0.668462741311041,2.3568472597987,1.10766947291811,2.70803863765016,0.25618263945135,0.130059347559878,0.657751618414705,0.829050053357545,0.869409257205157,1.03800594213442,1.60524496853828,1.04535523804977,0.339928028092699,0.383220493601921,3.4362744548263,6.32549230048757,0,0,0,0.602300476311091,0,0,0,0.821127996921047,1.61285394579786,1.60464117470104,1.30341963494519,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,1.53316637465883,0,0,0,0,0,0,0,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0.257640540045629,0,0,0,0.757301322732344,0,0,0.355009592516614,0,0.169560592310488,0.386521706326594,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0.109750285408626,0,0.201057944823262,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0.179117045405697,0,0,0.985326475791887,0,0,0,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,1.07813787429759,1.15508732651774,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0.462092022626489,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,2.67986696238627,0,0.464845549297286,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0.284567373393656,0.159426272728822,0.199579371432817,0.383010740264733,0,0,0,0,0,0,0.169291777801603,0,0,0,0.343505344755765,0,0,2.0021897005429,0,0.278406173895242,0,0,0,0,0,0,0,5.126395676764,0.568272293612826,0,0,0,0,0,0.222617410045812,0.494411622680279,0,0.19924798825107,0,0.503865495708552,0,0.123084805461069,0,0.449341755736634,0,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.317873157960757,0.632994193584081,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0.587954384486266,1.13176968554523,0,0,0,0.0730893170861856,0,0,0,0,0.274083849293502,0,0,0.391102765469606,0.400794101257669,0,0,0,0,0,0,0.124252535565433,0.235694034616795,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0,0,0.137539436597234,0,0.2249738915515,0,0.121499113316049,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0.164185041498678,0,0.226624183040251,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0.285465333544967,0,0,0.144921028610825,0.298509605773748,0,0,0,0.754703705257725,0,0,0.302461847526478,0,0.295710299979268,0.159296767163702,0,0.310525913752519,0.414706207840855,0,0,0.150257608997218,0,0,0,0.107410557042488,0.464033759878494,0,0,0,0,0,0.385239660814607,0,0,0.680117776536817,0,0.489473409012935,0,0,0,0,1.92914038270915,0.168942440653073,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,1.9998739585493,0,0,0,0.736423801007363,0,0,0.127894371303652,0.107824811396682,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0.294443155503077,0.11796972334774,0,1.03973099535304,0,0,0,0,2.42046082444224,0,0,0,0.739280431085226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0.354581522651905,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0.31020638566432,0,0.335566295393377,0,0,0,0,0,0,0.233939463462106,0,0,0,0.549702583727146,0.603851374266694,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41157948686277,1.60482733378337,0,0,0,0,0,0.436350690340377,0,0,0,0,0.252332849670158,0,0.380095503034311,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0.33639558774184,0,0,0,0,0.0673520530145875,0,0,0.162806537221949,0.747091421144008,0,0,0,0.122241444182866,0,0,0,0 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| ||
|short_description=p5@NME7 | |short_description=p5@NME7 | ||
}} | }} |
Latest revision as of 13:01, 18 September 2015
Short description: | p5@NME7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NME7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000528517_5end |
EntrezGene: | NME7 |
HGNC: | 20461 |
UniProt: | E9PNU1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 6.67e-20 | 25 |
pro-T cell | 6.67e-20 | 25 |
CD4-positive, alpha-beta T cell | 5.85e-18 | 6 |
mature alpha-beta T cell | 5.40e-17 | 18 |
alpha-beta T cell | 5.40e-17 | 18 |
immature T cell | 5.40e-17 | 18 |
mature T cell | 5.40e-17 | 18 |
immature alpha-beta T cell | 5.40e-17 | 18 |
regulatory T cell | 2.16e-14 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.16e-14 | 2 |
naive regulatory T cell | 2.16e-14 | 2 |
lymphoid lineage restricted progenitor cell | 3.80e-13 | 52 |
lymphocyte | 7.34e-13 | 53 |
common lymphoid progenitor | 7.34e-13 | 53 |
naive T cell | 6.84e-10 | 3 |
natural killer cell | 2.97e-09 | 3 |
pro-NK cell | 2.97e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 4.99e-08 | 1 |
cutaneous T cell lymphoma | 4.99e-08 | 1 |
mycosis fungoides | 4.99e-08 | 1 |
squamous cell carcinoma | 2.18e-07 | 14 |