FFCP PHASE1:Hg19::chr12:48276710..48276725,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7421 | |EntrezGene=7421 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12679 | |HGNC=12679 | ||
|TSSclassifier=strong | |||
|UniProt=F8VVY8 | |UniProt=F8VVY8 | ||
|association_with_transcript=0bp_to_ENST00000550314_5end | |association_with_transcript=0bp_to_ENST00000550314_5end | ||
|cluster_id=chr12:48276710..48276725,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_8_at_VDR_5end | |description=CAGE_peak_8_at_VDR_5end | ||
|id=chr12:48276710..48276725,- | |id=chr12:48276710..48276725,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000346;1.04e-10;3!CL:1000428;1.04e-10;3!CL:0002559;6.21e-07;5!CL:0002188;6.21e-07;5!CL:0000097;6.21e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,9.90e-11,3;CL:1000428,9.90e-11,3;CL:0002559,6.04e-07,5;CL:0000097,6.39e-07,5;CL:0002028,6.39e-07,5;CL:0002188,6.77e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!2.86e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.43e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.54e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0002294!4.13e-07!7;UBERON:0001173!4.13e-07!7;UBERON:0004912!4.13e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;3.30e-26;10!UBERON:0000178;9.28e-18;15!UBERON:0000179;9.28e-18;15!UBERON:0000463;9.28e-18;15!UBERON:0000478;2.19e-11;24!UBERON:0000412;1.04e-10;3!UBERON:0001992;1.04e-10;3!UBERON:0002390;8.58e-09;32!UBERON:0002073;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.78e-26,10;UBERON:0000358,2.78e-26,10;UBERON:0000307,2.78e-26,10;UBERON:0000091,2.78e-26,10;UBERON:0000087,2.78e-26,10;UBERON:0007010,2.78e-26,10;UBERON:0007806,2.78e-26,10;UBERON:0008780,2.78e-26,10;UBERON:0005728,2.78e-26,10;UBERON:0000178,8.28e-18,15;UBERON:0000179,8.28e-18,15;UBERON:0000463,8.28e-18,15;UBERON:0000478,2.04e-11,24;UBERON:0000412,9.90e-11,3;UBERON:0001992,9.90e-11,3;UBERON:0002073,6.04e-07,5;UBERON:0005086,6.04e-07,5 | |||
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| ||
|short_description=p8@VDR | |short_description=p8@VDR | ||
}} | }} |
Latest revision as of 13:24, 18 September 2015
Short description: | p8@VDR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_VDR_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 0bp_to_ENST00000550314_5end |
EntrezGene: | VDR |
HGNC: | 12679 |
UniProt: | F8VVY8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 9.90e-11 | 3 |
stem cell of epidermis | 9.90e-11 | 3 |
hair follicle cell | 6.04e-07 | 5 |
mast cell | 6.39e-07 | 5 |
basophil mast progenitor cell | 6.39e-07 | 5 |
glomerular endothelial cell | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.78e-26 | 10 |
blastocyst | 2.78e-26 | 10 |
blastula | 2.78e-26 | 10 |
bilaminar disc | 2.78e-26 | 10 |
inner cell mass | 2.78e-26 | 10 |
cleaving embryo | 2.78e-26 | 10 |
connecting stalk | 2.78e-26 | 10 |
inner cell mass derived epiblast | 2.78e-26 | 10 |
extraembryonic mesoderm | 2.78e-26 | 10 |
blood | 8.28e-18 | 15 |
haemolymphatic fluid | 8.28e-18 | 15 |
organism substance | 8.28e-18 | 15 |
extraembryonic structure | 2.04e-11 | 24 |
dermal papilla | 9.90e-11 | 3 |
papillary layer of dermis | 9.90e-11 | 3 |
hair follicle | 6.04e-07 | 5 |
hair follicle placode | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.54e-15 | 2 |