FFCP PHASE1:Hg19::chr14:103059455..103059488,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23186 | |EntrezGene=23186 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17441 | |HGNC=17441 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UKL0 | |UniProt=Q9UKL0 | ||
|association_with_transcript=-2bp_to_D31888_5end | |association_with_transcript=-2bp_to_D31888_5end | ||
|cluster_id=chr14:103059455..103059488,+ | |||
|coexpression_cluster_id=C17 | |coexpression_cluster_id=C17 | ||
|description=CAGE_peak_5_at_RCOR1_5end | |description=CAGE_peak_5_at_RCOR1_5end | ||
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|ontology_enrichment_celltype=CL:0000860!3.25e-11!45;CL:0002057!3.91e-10!42;CL:0000763!2.82e-09!112;CL:0000049!2.82e-09!112;CL:0000557!1.10e-08!71;CL:0000839!1.32e-08!70;CL:0002009!7.91e-08!65;CL:0000766!4.75e-07!76;CL:0000037!7.75e-07!172;CL:0000566!7.75e-07!172;CL:0002194!7.94e-07!63;CL:0000576!7.94e-07!63;CL:0000040!7.94e-07!63;CL:0000559!7.94e-07!63 | |ontology_enrichment_celltype=CL:0000860!3.25e-11!45;CL:0002057!3.91e-10!42;CL:0000763!2.82e-09!112;CL:0000049!2.82e-09!112;CL:0000557!1.10e-08!71;CL:0000839!1.32e-08!70;CL:0002009!7.91e-08!65;CL:0000766!4.75e-07!76;CL:0000037!7.75e-07!172;CL:0000566!7.75e-07!172;CL:0002194!7.94e-07!63;CL:0000576!7.94e-07!63;CL:0000040!7.94e-07!63;CL:0000559!7.94e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.86e-17;33!CL:0002057;2.86e-17;33!CL:0000473;4.38e-13;39!CL:0000234;4.38e-13;39!CL:0001014;1.38e-09;2!CL:0001016;1.38e-09;2!CL:0000576;1.28e-08;48!CL:0000766;6.42e-07;69!CL:0002541;8.38e-07;3 | |ontology_enrichment_celltype_v019=CL:0000860;2.86e-17;33!CL:0002057;2.86e-17;33!CL:0000473;4.38e-13;39!CL:0000234;4.38e-13;39!CL:0001014;1.38e-09;2!CL:0001016;1.38e-09;2!CL:0000576;1.28e-08;48!CL:0000766;6.42e-07;69!CL:0002541;8.38e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000557,5.32e-15,67;CL:0000860,6.50e-14,42;CL:0002057,6.50e-14,42;CL:0002009,1.23e-12,61;CL:0000473,3.73e-12,48;CL:0000234,3.73e-12,48;CL:0000839,1.08e-11,66;CL:0000763,1.36e-11,108;CL:0000049,1.36e-11,108;CL:0000766,1.06e-10,72;CL:0002194,1.10e-09,59;CL:0000576,1.10e-09,59;CL:0000040,1.10e-09,59;CL:0000559,1.10e-09,59;CL:0001014,1.12e-09,2;CL:0001016,1.12e-09,2;CL:0000988,1.72e-08,177;CL:0002031,3.59e-08,120;CL:0002032,1.51e-07,161;CL:0000837,1.51e-07,161;CL:0000037,3.37e-07,168;CL:0000738,3.87e-07,136;CL:0002541,6.50e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.24e-10;42 | |ontology_enrichment_development_v019=CL:0002057;1.24e-10;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.00e-07!102;UBERON:0003061!3.00e-07!102;UBERON:0002193!7.71e-07!112 | |ontology_enrichment_uberon=UBERON:0002390!3.00e-07!102;UBERON:0003061!3.00e-07!102;UBERON:0002193!7.71e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;8.38e-07;3!UBERON:0000920;8.38e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0003124;8.38e-07;3!UBERON:0000920;8.38e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.48e-13,76;UBERON:0002390,7.29e-13,98;UBERON:0003061,7.29e-13,98;UBERON:0001474,3.43e-12,82;UBERON:0002193,1.28e-11,108;UBERON:0004765,4.54e-11,90;UBERON:0002405,1.07e-10,93;UBERON:0001434,6.49e-10,100;UBERON:0000920,6.50e-07,3 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0.739508020333575,0.154934401160603,0,0,0,0,0.651032612147555,0,0,0,0.436194716338694,0,0.970336244751265,0,1.23350366406548,1.23882548358041,0,0.256160706529101,0,0.689491361473237,1.29096936716765,0,0.564727018627814,0,0.224723484445085,0.306083892370903,0.962787081228281,0.639337125799041,0.659702600373432,0.398927315243264,0.852449501065388,0.870627715885752,0.56738522469114,1.24564449799115,0.75374599577023,1.5644487552606,0.65156653411535,1.21079900526674,0.736555271975129,0.632924774881769,0,0.212604299965044,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0.294605907474837,0.221533894583621,0,0,0.260118695119756,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0.370784442784429,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0.66944122552934,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.397227542439656,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0.337552664482532,0,0,0.0920498986422993,0,0.355009592516614,0,0,0.386521706326594,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0.464367928031979,0,0.473227200159376,0.168584690078102,0.482022059766964,0.220587945464788,0.653638332277218,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0,0,0.234004265139238,0.148631162288728,0,0.335964256397719,0.141775097242386,0.179117045405697,0,0,161.100878791974,0.088048434013226,0.414656231081544,0,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0.336255431980582,0,0.215627574859517,0.256686072559497,0.254094624222463,0,0,0,0,0.749007023947182,0,0,0,0.500170521059677,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,0,0.320182673410333,0.303127571446259,0,0,0,0.153461973288062,0.280660094433074,0.256278298511402,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0,0,0.451199612907412,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0.165018999841176,0,0,0,0.096670718292122,0,0,0.275673144969061,0,0,0.255679882248303,0.0890320356467374,0,0.192190067365106,0.127612712494584,0.6069466851333,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0,0.0982490410131212,0,0,0,0.329294892959902,0,0,0.192444225451024,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0.79312517629427,0,0,0,0.185803175125719,0,0.213425530045242,0,0,0,0,0.324621940274555,0.280797178113459,0.456469358066384,0.156679895773023,0,0.169291777801603,0,0.201799707191048,0.425846237690326,0.343505344755765,0,0,0.166849141711909,0.19538809540204,0.556812347790485,0,0,0,1.4098700508785,0,0,0.121360521749513,0.222886768554957,0,0.47748896947538,0,0,0,0,0.111308705022906,0,0.63337622438398,0.398495976502139,0.276283915531148,0,0.20453736500431,0.492339221844278,0,0.0898683511473268,0,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0.227586896570999,0.254253650292766,0.236387681767936,0.344743373241465,0,0,0,0,0,0.110579259931225,0,0,0,0.278847488557207,0.153900517007594,0,0.23056390438806,0,0.108647371922008,0.31900115973192,0.183195186803725,1.5991043280559,0,0,0,0.451191321234361,0,0.167821586975843,0,0,0,0.326465616318295,0,0,0,0,0,3.26173241548684,0.247127877893006,0.522109747527277,0,0,0,0,0.391329237864179,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0.347119476670262,0.489961987071888,0.435296032902013,0,0,0.0967563312890851,0.365446585430928,0.246346371159628,0.193978032976839,0,0.451961481561065,0,0,0.0633107959558787,0,0,0,0.799238438328521,0.144090417154106,0,0.171594997861965,0,0.124252535565433,0.471388069233591,0,0,0,0,0.600420288709789,0.273810757783986,0,0.429765441419957,0.788662062837943,0,0.229160424011684,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0.137539436597234,0,0.674921674654501,1.5476039091159,0.0607495566580247,0.670869375198532,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0.171086837884329,0,0,0.157204305099666,0.414239055347196,0,0.197611631897944,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0,0.3755727921195,0,0.110929051536852,0,0.276697269872462,0,0.151649117541648,0,0.2352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| ||
|short_description=p5@RCOR1 | |short_description=p5@RCOR1 | ||
}} | }} |
Latest revision as of 14:06, 18 September 2015
Short description: | p5@RCOR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RCOR1_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -2bp_to_D31888_5end |
EntrezGene: | RCOR1 |
HGNC: | 17441 |
UniProt: | Q9UKL0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 5.32e-15 | 67 |
classical monocyte | 6.50e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.50e-14 | 42 |
macrophage dendritic cell progenitor | 1.23e-12 | 61 |
defensive cell | 3.73e-12 | 48 |
phagocyte | 3.73e-12 | 48 |
myeloid lineage restricted progenitor cell | 1.08e-11 | 66 |
myeloid cell | 1.36e-11 | 108 |
common myeloid progenitor | 1.36e-11 | 108 |
myeloid leukocyte | 1.06e-10 | 72 |
monopoietic cell | 1.10e-09 | 59 |
monocyte | 1.10e-09 | 59 |
monoblast | 1.10e-09 | 59 |
promonocyte | 1.10e-09 | 59 |
CD1a-positive Langerhans cell | 1.12e-09 | 2 |
immature CD1a-positive Langerhans cell | 1.12e-09 | 2 |
hematopoietic cell | 1.72e-08 | 177 |
hematopoietic lineage restricted progenitor cell | 3.59e-08 | 120 |
hematopoietic oligopotent progenitor cell | 1.51e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.51e-07 | 161 |
hematopoietic stem cell | 3.37e-07 | 168 |
leukocyte | 3.87e-07 | 136 |
chorionic membrane mesenchymal stem cell | 6.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.48e-13 | 76 |
hematopoietic system | 7.29e-13 | 98 |
blood island | 7.29e-13 | 98 |
bone element | 3.43e-12 | 82 |
hemolymphoid system | 1.28e-11 | 108 |
skeletal element | 4.54e-11 | 90 |
immune system | 1.07e-10 | 93 |
skeletal system | 6.49e-10 | 100 |
egg chorion | 6.50e-07 | 3 |