FFCP PHASE1:Hg19::chr1:170632477..170632506,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5396 | |EntrezGene=5396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9142 | |HGNC=9142 | ||
|TSSclassifier=strong | |||
|UniProt=P54821 | |UniProt=P54821 | ||
|association_with_transcript=202bp_to_ENST00000367760_5end | |association_with_transcript=202bp_to_ENST00000367760_5end | ||
|cluster_id=chr1:170632477..170632506,+ | |||
|description=CAGE_peak_6_at_PRRX1_5end | |description=CAGE_peak_6_at_PRRX1_5end | ||
|id=chr1:170632477..170632506,+ | |id=chr1:170632477..170632506,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.59e-35!180;CL:0000057!8.60e-21!75;CL:0002620!5.68e-11!23;CL:0000680!3.87e-10!57;CL:0000056!3.87e-10!57;CL:0000355!3.87e-10!57;CL:0000187!4.08e-09!54;CL:0000393!9.59e-09!60;CL:0000211!9.59e-09!60;CL:0000183!3.00e-08!59;CL:0002334!4.32e-08!12;CL:0000359!3.07e-07!32 | |ontology_enrichment_celltype=CL:0000055!8.59e-35!180;CL:0000057!8.60e-21!75;CL:0002620!5.68e-11!23;CL:0000680!3.87e-10!57;CL:0000056!3.87e-10!57;CL:0000355!3.87e-10!57;CL:0000187!4.08e-09!54;CL:0000393!9.59e-09!60;CL:0000211!9.59e-09!60;CL:0000183!3.00e-08!59;CL:0002334!4.32e-08!12;CL:0000359!3.07e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.46e-13;23!CL:0000057;5.66e-09;73!CL:0002334;1.97e-08;12!CL:0002570;8.91e-07;8!CL:0002556;9.92e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.27e-22,76;CL:0002620,3.08e-13,23;CL:0000048,1.89e-09,427;CL:0000723,9.00e-09,433;CL:0002334,1.45e-08,12;CL:0000034,3.30e-08,441;CL:0000680,9.96e-08,58;CL:0000056,9.96e-08,58;CL:0000355,9.96e-08,58;CL:0002570,6.33e-07,8;CL:0000393,9.62e-07,61;CL:0000211,9.62e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.37e-19!83;UBERON:0002329!2.37e-19!83;UBERON:0003077!2.37e-19!83;UBERON:0003059!2.37e-19!83;UBERON:0007282!2.37e-19!83;UBERON:0009618!2.37e-19!83;UBERON:0007285!2.37e-19!83;UBERON:0004290!2.59e-16!70;UBERON:0000475!3.35e-15!365;UBERON:0000486!1.38e-13!82;UBERON:0002199!4.13e-12!45;UBERON:0002416!4.13e-12!45;UBERON:0003102!4.16e-12!95;UBERON:0001134!1.13e-11!61;UBERON:0002036!1.13e-11!61;UBERON:0003082!1.13e-11!61;UBERON:0002385!2.63e-11!63;UBERON:0001015!2.63e-11!63;UBERON:0000383!2.63e-11!63;UBERON:0002097!1.26e-09!40;UBERON:0000924!4.78e-09!173;UBERON:0006601!4.78e-09!173;UBERON:0004121!9.96e-09!169;UBERON:0000479!1.26e-08!787;UBERON:0000073!4.17e-08!94;UBERON:0001016!4.17e-08!94;UBERON:0000468!4.39e-08!659;UBERON:0001013!6.24e-08!14;UBERON:0000153!1.47e-07!129;UBERON:0007811!1.47e-07!129;UBERON:0000033!3.12e-07!123;UBERON:0000119!3.40e-07!312;UBERON:0002067!4.25e-07!9;UBERON:0004016!4.25e-07!9;UBERON:0010083!4.25e-07!9;UBERON:0000481!4.59e-07!347;UBERON:0007023!6.75e-07!115;UBERON:0000483!9.63e-07!309 | |ontology_enrichment_uberon=UBERON:0000914!2.37e-19!83;UBERON:0002329!2.37e-19!83;UBERON:0003077!2.37e-19!83;UBERON:0003059!2.37e-19!83;UBERON:0007282!2.37e-19!83;UBERON:0009618!2.37e-19!83;UBERON:0007285!2.37e-19!83;UBERON:0004290!2.59e-16!70;UBERON:0000475!3.35e-15!365;UBERON:0000486!1.38e-13!82;UBERON:0002199!4.13e-12!45;UBERON:0002416!4.13e-12!45;UBERON:0003102!4.16e-12!95;UBERON:0001134!1.13e-11!61;UBERON:0002036!1.13e-11!61;UBERON:0003082!1.13e-11!61;UBERON:0002385!2.63e-11!63;UBERON:0001015!2.63e-11!63;UBERON:0000383!2.63e-11!63;UBERON:0002097!1.26e-09!40;UBERON:0000924!4.78e-09!173;UBERON:0006601!4.78e-09!173;UBERON:0004121!9.96e-09!169;UBERON:0000479!1.26e-08!787;UBERON:0000073!4.17e-08!94;UBERON:0001016!4.17e-08!94;UBERON:0000468!4.39e-08!659;UBERON:0001013!6.24e-08!14;UBERON:0000153!1.47e-07!129;UBERON:0007811!1.47e-07!129;UBERON:0000033!3.12e-07!123;UBERON:0000119!3.40e-07!312;UBERON:0002067!4.25e-07!9;UBERON:0004016!4.25e-07!9;UBERON:0010083!4.25e-07!9;UBERON:0000481!4.59e-07!347;UBERON:0007023!6.75e-07!115;UBERON:0000483!9.63e-07!309 | ||
|ontology_enrichment_uberon_v019=UBERON:0002199;3.90e-10;46!UBERON:0002416;3.90e-10;46!UBERON:0002097;1.87e-09;41!UBERON:0002385;9.82e-09;31!UBERON:0001015;9.82e-09;31!UBERON:0000383;9.82e-09;31!UBERON:0003102;1.90e-08;50!UBERON:0001013;2.87e-08;14!UBERON:0002067;3.06e-08;9!UBERON:0001134;4.38e-08;16!UBERON:0002036;4.38e-08;16!UBERON:0002384;5.44e-08;198!UBERON:0002204;6.75e-08;70!UBERON:0001758;9.92e-07;6!UBERON:0003672;9.92e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.28e-15,46;UBERON:0002416,1.28e-15,46;UBERON:0007524,1.63e-14,73;UBERON:0002329,3.11e-14,71;UBERON:0003059,3.11e-14,71;UBERON:0007282,3.11e-14,71;UBERON:0004290,3.11e-14,71;UBERON:0009618,3.11e-14,71;UBERON:0003077,8.16e-14,72;UBERON:0007285,8.16e-14,72;UBERON:0003102,1.12e-13,99;UBERON:0000486,1.27e-12,83;UBERON:0002097,1.60e-12,41;UBERON:0007503,1.44e-11,78;UBERON:0001134,2.58e-09,62;UBERON:0002036,2.58e-09,62;UBERON:0003082,2.58e-09,62;UBERON:0002385,1.14e-08,64;UBERON:0001015,1.14e-08,64;UBERON:0000383,1.14e-08,64;UBERON:0001013,2.23e-08,14;UBERON:0002067,2.48e-08,9;UBERON:0004016,2.48e-08,9;UBERON:0010083,2.48e-08,9;UBERON:0010314,9.81e-08,132;UBERON:0000479,2.83e-07,773 | |||
|phase1_expression=12.3541297903979,8.56402095563933,1.26858963686374,2.00146596706261,0,0.872338524100369,2.53299878168311,5.05375898741465,4.70134130759709,0.245733936501509,0,0,0,1.36142988256051,0.994192127183747,4.03395087871065,2.41077811209591,3.65155045193687,5.36726078669558,0.246242116153576,0,0,5.15224776835902,5.88560027813402,1.00434111675842,2.44522898393444,2.62721886239826,1.65292640758726,0,0,1.08371286321253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.767175371061182,7.59022220007589,13.536123587169,7.67686550492366,3.9764297352555,3.89307896242109,0,0,0.175669571386252,0.327447688744282,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0.838998872419812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549605231791222,0,0,0,0.993943903390637,8.737505304856,2.1185468930115,3.72887606973458,10.9947198481491,3.92474320099615,0,0.49333509683432,8.71390899119346,0.538842688278752,1.30769522490767,0.454072282934794,1.15235184896,1.17160715916898,6.55536161343673,6.84566185853339,3.88566569434683,6.6937664226946,6.96053660782966,6.60118791500568,5.71631679513701,3.19369225010597,6.30287265172169,21.384051431077,19.7813543422846,0,0,12.1202002046928,10.1346001096291,7.75779523355712,5.26773145057006,9.50112166976961,36.8083244321162,0.794025282120147,6.63741652048789,7.901623386287,1.48352330811693,1.20036438433761,1.13357782162283,3.86460810068444,6.14185625894246,11.9831195891299,9.25651549031387,1.00973509697646,1.74894807420369,6.30419621593366,3.55009592516614,3.62707553619505,2.7129694769678,0,0,0,0,0.132529768321485,1.74290914304278,0.621966330092223,0,0,7.8224766164908,21.2269509603652,5.52539685409922,5.57241513638375,5.0531563716871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02940686179115,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,1.12131084345361,0.87192013766656,5.867062865676,0.387815147273333,7.15312891703765,2.535908257668,0.797814349754612,0,2.57207374262142,0,1.8649552531127,0.142977993658148,1.08524321078289,1.64648067356154,1.95441710576241,0,0.791951872933429,0,0,0,0,0,0,2.63587341040741,3.44585807502342,5.70547620162874,2.75084482668401,3.6985738059069,2.50685348535854,0,0,0,0,2.54094624222463,0,2.31986643833309,1.00509759200609,5.10351001322531,0,0,0,1.96306386750624,1.50051156317903,0.271265023699736,14.5579603071565,4.99601168632053,4.73107245101804,24.5996971484698,3.61135319673263,11.3703752027992,2.0694614258501,10.627609576567,4.60922921354258,5.82120216936155,0.979005787313703,1.37257369524342,0,0,0,0,0,0,9.92431231275107,20.7173663938884,9.26178311629143,1.92208723883551,12.7926812266676,0.64341568457443,1.48418066444991,10.9488882599885,15.2703083769289,26.8555800165156,3.63478100428535,9.64546141217662,0,0,0,0.114814448164607,1.0925470080403,1.70461739447251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02580050046556,0,1.95227036798582,0.206082023295445,0.0915694648183434,0.082509499920588,4.59412430396938,3.25030123018261,1.6068392984416,3.67348729510063,0.462145851343933,1.38153307253517,2.34322173223702,3.75970857038958,3.0453505721988,4.60223788046945,3.65031346151623,0,0,0,0,0.464845549297286,1.88887408098384,6.970372701606,4.92853728281742,2.12922412126809,3.47973196830029,4.633105477598,0.572499546967965,2.97726695487734,1.2655176988749,0,0,2.56763392820352,8.59148769400029,0,0.719489830333259,0,0.117812402345686,1.61745985258653,1.58510321173008,1.26377536871694,0,3.89941583410055,1.05650146756755,1.50149902548784,0,2.26016233240486,6.06501877900737,0,0.876901770507525,0.578775534266688,1.9676842561399,0.811641507850816,1.54911749049875,2.53526042279017,0.573645408816206,0.392996164052485,0,6.03093808920016,13.7219962943482,18.1112191127946,0.379473173765715,1.04980416073495,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24873719888493,0,0.111443384277478,0,0,0.296964680832639,0,1.9882952955326,0.844016498463076,0.111308705022906,0,0,1.39473591775749,0,0,0,4.18488338567636,2.79935628895627,0,0,0,1.67693789582787,0,2.22273980289274,0,1.20598527610407,0,0,0,1.44999915086959,0,0,0,0,0,1.90987494426621,6.20018970069687,1.4471572635049,0,1.3269511191747,0.295547618953547,1.31631238292384,0,0,4.15531395920504,0.113942055847001,0,0,0,0,1.37396390102793,0,0,0,0,0,0,0,0,0,0,0,0,3.02944095638928,0,0.530745387020035,0,0,0,0,2.42644078730437,5.61804353109152,1.63985112007737,0,0,0,0.394584402849391,0,0,31.5301032346155,0,0,0,0,0,0,0,18.9984302028,0,0,0,1.39781334593624,0.51595809741485,0,0,0,0.872901148395775,0,2.93774963014692,0,0.596143835108969,0.949661939338181,0,0,0.213452994739353,0,0,0,0,0,0,0,2.8539883275459,2.196659772559,0,0.577901179803038,3.60252173225874,1.36905378891993,0,0,0,1.67569440763353,1.3749625440701,1.43574604915363,0,0.42922604813657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| ||
|short_description=p6@PRRX1 | |short_description=p6@PRRX1 | ||
}} | }} |
Latest revision as of 14:14, 18 September 2015
Short description: | p6@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PRRX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 202bp_to_ENST00000367760_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | P54821 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.27e-22 | 76 |
skin fibroblast | 3.08e-13 | 23 |
multi fate stem cell | 1.89e-09 | 427 |
somatic stem cell | 9.00e-09 | 433 |
preadipocyte | 1.45e-08 | 12 |
stem cell | 3.30e-08 | 441 |
muscle precursor cell | 9.96e-08 | 58 |
myoblast | 9.96e-08 | 58 |
multi-potent skeletal muscle stem cell | 9.96e-08 | 58 |
mesenchymal stem cell of adipose | 6.33e-07 | 8 |
electrically responsive cell | 9.62e-07 | 61 |
electrically active cell | 9.62e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
integument | 1.28e-15 | 46 |
integumental system | 1.28e-15 | 46 |
dense mesenchyme tissue | 1.63e-14 | 73 |
somite | 3.11e-14 | 71 |
presomitic mesoderm | 3.11e-14 | 71 |
presumptive segmental plate | 3.11e-14 | 71 |
dermomyotome | 3.11e-14 | 71 |
trunk paraxial mesoderm | 3.11e-14 | 71 |
paraxial mesoderm | 8.16e-14 | 72 |
presumptive paraxial mesoderm | 8.16e-14 | 72 |
surface structure | 1.12e-13 | 99 |
multilaminar epithelium | 1.27e-12 | 83 |
skin of body | 1.60e-12 | 41 |
epithelial vesicle | 1.44e-11 | 78 |
skeletal muscle tissue | 2.58e-09 | 62 |
striated muscle tissue | 2.58e-09 | 62 |
myotome | 2.58e-09 | 62 |
muscle tissue | 1.14e-08 | 64 |
musculature | 1.14e-08 | 64 |
musculature of body | 1.14e-08 | 64 |
adipose tissue | 2.23e-08 | 14 |
dermis | 2.48e-08 | 9 |
dermatome | 2.48e-08 | 9 |
future dermis | 2.48e-08 | 9 |
structure with developmental contribution from neural crest | 9.81e-08 | 132 |
tissue | 2.83e-07 | 773 |