FFCP PHASE1:Hg19::chr1:170633294..170633303,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5396 | |EntrezGene=5396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9142 | |HGNC=9142 | ||
|TSSclassifier=strong | |||
|UniProt=P54821 | |UniProt=P54821 | ||
|association_with_transcript=-9bp_to_NM_006902,NM_022716,uc001ghe.2,uc001ghf.2_5end | |association_with_transcript=-9bp_to_NM_006902,NM_022716,uc001ghe.2,uc001ghf.2_5end | ||
|cluster_id=chr1:170633294..170633303,+ | |||
|coexpression_cluster_id=C851 | |coexpression_cluster_id=C851 | ||
|description=CAGE_peak_23_at_PRRX1_5end | |description=CAGE_peak_23_at_PRRX1_5end | ||
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|ontology_enrichment_celltype=CL:0000055!5.82e-37!180;CL:0000057!1.24e-21!75;CL:0000680!4.71e-16!57;CL:0000056!4.71e-16!57;CL:0000355!4.71e-16!57;CL:0000187!9.18e-16!54;CL:0000183!7.51e-14!59;CL:0000393!1.06e-12!60;CL:0000211!1.06e-12!60;CL:0000192!7.19e-12!42;CL:0000514!7.19e-12!42;CL:0000359!1.51e-11!32;CL:0002620!8.28e-10!23;CL:0002334!4.91e-07!12;CL:0000048!8.36e-07!430 | |ontology_enrichment_celltype=CL:0000055!5.82e-37!180;CL:0000057!1.24e-21!75;CL:0000680!4.71e-16!57;CL:0000056!4.71e-16!57;CL:0000355!4.71e-16!57;CL:0000187!9.18e-16!54;CL:0000183!7.51e-14!59;CL:0000393!1.06e-12!60;CL:0000211!1.06e-12!60;CL:0000192!7.19e-12!42;CL:0000514!7.19e-12!42;CL:0000359!1.51e-11!32;CL:0002620!8.28e-10!23;CL:0002334!4.91e-07!12;CL:0000048!8.36e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0002556;2.47e-09;6!CL:0000057;6.55e-08;73!CL:0002334;7.73e-08;12!CL:0002552;9.62e-08;5!CL:0000346;2.74e-07;3!CL:1000428;2.74e-07;3!CL:0002559;3.24e-07;5 | |ontology_enrichment_celltype_v019=CL:0002556;2.47e-09;6!CL:0000057;6.55e-08;73!CL:0002334;7.73e-08;12!CL:0002552;9.62e-08;5!CL:0000346;2.74e-07;3!CL:1000428;2.74e-07;3!CL:0002559;3.24e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.43e-13,76;CL:0002556,8.64e-10,6;CL:0002334,7.04e-08,12;CL:0002559,7.20e-08,5;CL:0000346,8.01e-08,3;CL:1000428,8.01e-08,3;CL:0002552,1.47e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.12e-26!83;UBERON:0002329!2.12e-26!83;UBERON:0003077!2.12e-26!83;UBERON:0003059!2.12e-26!83;UBERON:0007282!2.12e-26!83;UBERON:0009618!2.12e-26!83;UBERON:0007285!2.12e-26!83;UBERON:0004290!2.03e-23!70;UBERON:0000486!1.75e-18!82;UBERON:0002385!4.36e-18!63;UBERON:0001015!4.36e-18!63;UBERON:0000383!4.36e-18!63;UBERON:0001134!1.02e-17!61;UBERON:0002036!1.02e-17!61;UBERON:0003082!1.02e-17!61;UBERON:0000475!6.97e-16!365;UBERON:0003102!3.82e-14!95;UBERON:0005256!3.37e-13!143;UBERON:0002199!4.79e-10!45;UBERON:0002416!4.79e-10!45;UBERON:0002100!8.41e-10!216;UBERON:0000481!7.95e-09!347;UBERON:0004872!1.01e-08!84;UBERON:0002097!1.16e-08!40;UBERON:0004573!3.80e-08!33;UBERON:0004571!3.80e-08!33;UBERON:0001637!4.04e-08!42;UBERON:0003509!4.04e-08!42;UBERON:0004572!4.04e-08!42;UBERON:0000479!5.03e-08!787;UBERON:0002067!1.01e-07!9;UBERON:0004016!1.01e-07!9;UBERON:0010083!1.01e-07!9;UBERON:0000948!1.60e-07!24;UBERON:0005498!1.60e-07!24;UBERON:0004140!1.60e-07!24;UBERON:0009881!1.60e-07!24;UBERON:0004141!1.60e-07!24;UBERON:0003084!1.60e-07!24;UBERON:0007005!1.60e-07!24;UBERON:0004139!1.60e-07!24;UBERON:0004291!1.60e-07!24;UBERON:0007100!4.17e-07!27;UBERON:0001981!6.48e-07!60;UBERON:0007500!6.48e-07!60;UBERON:0004537!6.48e-07!60;UBERON:0006965!6.48e-07!60;UBERON:0000119!9.16e-07!312 | |ontology_enrichment_uberon=UBERON:0000914!2.12e-26!83;UBERON:0002329!2.12e-26!83;UBERON:0003077!2.12e-26!83;UBERON:0003059!2.12e-26!83;UBERON:0007282!2.12e-26!83;UBERON:0009618!2.12e-26!83;UBERON:0007285!2.12e-26!83;UBERON:0004290!2.03e-23!70;UBERON:0000486!1.75e-18!82;UBERON:0002385!4.36e-18!63;UBERON:0001015!4.36e-18!63;UBERON:0000383!4.36e-18!63;UBERON:0001134!1.02e-17!61;UBERON:0002036!1.02e-17!61;UBERON:0003082!1.02e-17!61;UBERON:0000475!6.97e-16!365;UBERON:0003102!3.82e-14!95;UBERON:0005256!3.37e-13!143;UBERON:0002199!4.79e-10!45;UBERON:0002416!4.79e-10!45;UBERON:0002100!8.41e-10!216;UBERON:0000481!7.95e-09!347;UBERON:0004872!1.01e-08!84;UBERON:0002097!1.16e-08!40;UBERON:0004573!3.80e-08!33;UBERON:0004571!3.80e-08!33;UBERON:0001637!4.04e-08!42;UBERON:0003509!4.04e-08!42;UBERON:0004572!4.04e-08!42;UBERON:0000479!5.03e-08!787;UBERON:0002067!1.01e-07!9;UBERON:0004016!1.01e-07!9;UBERON:0010083!1.01e-07!9;UBERON:0000948!1.60e-07!24;UBERON:0005498!1.60e-07!24;UBERON:0004140!1.60e-07!24;UBERON:0009881!1.60e-07!24;UBERON:0004141!1.60e-07!24;UBERON:0003084!1.60e-07!24;UBERON:0007005!1.60e-07!24;UBERON:0004139!1.60e-07!24;UBERON:0004291!1.60e-07!24;UBERON:0007100!4.17e-07!27;UBERON:0001981!6.48e-07!60;UBERON:0007500!6.48e-07!60;UBERON:0004537!6.48e-07!60;UBERON:0006965!6.48e-07!60;UBERON:0000119!9.16e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0001758;2.47e-09;6!UBERON:0003672;2.47e-09;6!UBERON:0002067;4.42e-08;9!UBERON:0003129;6.23e-08;7!UBERON:0000412;2.74e-07;3!UBERON:0001992;2.74e-07;3!UBERON:0002073;3.24e-07;5!UBERON:0002384;4.65e-07;198 | |ontology_enrichment_uberon_v019=UBERON:0001758;2.47e-09;6!UBERON:0003672;2.47e-09;6!UBERON:0002067;4.42e-08;9!UBERON:0003129;6.23e-08;7!UBERON:0000412;2.74e-07;3!UBERON:0001992;2.74e-07;3!UBERON:0002073;3.24e-07;5!UBERON:0002384;4.65e-07;198 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001758,8.64e-10,6;UBERON:0003672,8.64e-10,6;UBERON:0002329,4.80e-09,71;UBERON:0003059,4.80e-09,71;UBERON:0007282,4.80e-09,71;UBERON:0004290,4.80e-09,71;UBERON:0009618,4.80e-09,71;UBERON:0003077,7.63e-09,72;UBERON:0007285,7.63e-09,72;UBERON:0003102,8.26e-09,99;UBERON:0007524,1.20e-08,73;UBERON:0002067,2.55e-08,9;UBERON:0004016,2.55e-08,9;UBERON:0010083,2.55e-08,9;UBERON:0003129,2.57e-08,7;UBERON:0002073,7.20e-08,5;UBERON:0005086,7.20e-08,5;UBERON:0000412,8.01e-08,3;UBERON:0001992,8.01e-08,3;UBERON:0007503,9.45e-08,78;UBERON:0000486,5.69e-07,83;UBERON:0002199,6.88e-07,46;UBERON:0002416,6.88e-07,46 | |||
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| ||
|short_description=p23@PRRX1 | |short_description=p23@PRRX1 | ||
}} | }} |
Latest revision as of 14:26, 18 September 2015
Short description: | p23@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_PRRX1_5end |
Coexpression cluster: | C851_Fibroblast_mesenchymal_Myoblast_normal_Olfactory_skeletal_Osteoblast |
Association with transcript: | -9bp_to_NM_006902, NM_022716, uc001ghe.2, uc001ghf.2_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | P54821 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.43e-13 | 76 |
fibroblast of periodontium | 8.64e-10 | 6 |
preadipocyte | 7.04e-08 | 12 |
hair follicle cell | 7.20e-08 | 5 |
hair follicle dermal papilla cell | 8.01e-08 | 3 |
stem cell of epidermis | 8.01e-08 | 3 |
fibroblast of gingiva | 1.47e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
periodontium | 8.64e-10 | 6 |
dentition | 8.64e-10 | 6 |
somite | 4.80e-09 | 71 |
presomitic mesoderm | 4.80e-09 | 71 |
presumptive segmental plate | 4.80e-09 | 71 |
dermomyotome | 4.80e-09 | 71 |
trunk paraxial mesoderm | 4.80e-09 | 71 |
paraxial mesoderm | 7.63e-09 | 72 |
presumptive paraxial mesoderm | 7.63e-09 | 72 |
surface structure | 8.26e-09 | 99 |
dense mesenchyme tissue | 1.20e-08 | 73 |
dermis | 2.55e-08 | 9 |
dermatome | 2.55e-08 | 9 |
future dermis | 2.55e-08 | 9 |
skull | 2.57e-08 | 7 |
hair follicle | 7.20e-08 | 5 |
hair follicle placode | 7.20e-08 | 5 |
dermal papilla | 8.01e-08 | 3 |
papillary layer of dermis | 8.01e-08 | 3 |
epithelial vesicle | 9.45e-08 | 78 |
multilaminar epithelium | 5.69e-07 | 83 |
integument | 6.88e-07 | 46 |
integumental system | 6.88e-07 | 46 |