FFCP PHASE1:Hg19::chr12:49579761..49579773,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7846 | |EntrezGene=7846 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=20766 | |HGNC=20766 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UQM3 | |UniProt=Q9UQM3 | ||
|association_with_transcript=0bp_to_AF141348_5end | |association_with_transcript=0bp_to_AF141348_5end | ||
|cluster_id=chr12:49579761..49579773,- | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_6_at_TUBA1A_5end | |description=CAGE_peak_6_at_TUBA1A_5end | ||
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|ontology_enrichment_celltype=CL:0000055!2.14e-13!180;CL:0000393!2.35e-10!60;CL:0000211!2.35e-10!60;CL:0000183!7.84e-09!59;CL:0000680!1.42e-08!57;CL:0000056!1.42e-08!57;CL:0000355!1.42e-08!57;CL:0000187!2.02e-08!54;CL:0000192!2.66e-08!42;CL:0000514!2.66e-08!42 | |ontology_enrichment_celltype=CL:0000055!2.14e-13!180;CL:0000393!2.35e-10!60;CL:0000211!2.35e-10!60;CL:0000183!7.84e-09!59;CL:0000680!1.42e-08!57;CL:0000056!1.42e-08!57;CL:0000355!1.42e-08!57;CL:0000187!2.02e-08!54;CL:0000192!2.66e-08!42;CL:0000514!2.66e-08!42 | ||
|ontology_enrichment_celltype_v019=CL:0000192;9.00e-07;43 | |ontology_enrichment_celltype_v019=CL:0000192;9.00e-07;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,8.10e-12,61;CL:0000211,8.10e-12,61;CL:0000187,1.88e-09,55;CL:0000680,2.93e-09,58;CL:0000056,2.93e-09,58;CL:0000355,2.93e-09,58;CL:0000192,2.27e-08,43;CL:0000514,2.27e-08,43 | |||
|ontology_enrichment_development_v019=CL:0000514;9.00e-07;43 | |ontology_enrichment_development_v019=CL:0000514;9.00e-07;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.46e-14!82;UBERON:0005743!2.57e-13!86;UBERON:0000073!4.34e-12!94;UBERON:0001016!4.34e-12!94;UBERON:0000914!1.06e-11!83;UBERON:0002329!1.06e-11!83;UBERON:0003077!1.06e-11!83;UBERON:0003059!1.06e-11!83;UBERON:0007282!1.06e-11!83;UBERON:0009618!1.06e-11!83;UBERON:0007285!1.06e-11!83;UBERON:0000955!3.96e-10!69;UBERON:0006238!3.96e-10!69;UBERON:0001049!4.59e-10!57;UBERON:0005068!4.59e-10!57;UBERON:0006241!4.59e-10!57;UBERON:0007135!4.59e-10!57;UBERON:0004290!2.64e-09!70;UBERON:0002616!2.95e-09!59;UBERON:0000119!4.69e-09!312;UBERON:0000483!9.51e-09!309;UBERON:0000025!3.69e-08!194;UBERON:0000475!4.77e-08!365;UBERON:0001134!1.04e-07!61;UBERON:0002036!1.04e-07!61;UBERON:0003082!1.04e-07!61;UBERON:0002346!2.14e-07!90;UBERON:0002020!2.66e-07!34;UBERON:0003528!2.66e-07!34;UBERON:0003075!2.91e-07!86;UBERON:0007284!2.91e-07!86;UBERON:0002385!3.08e-07!63;UBERON:0001015!3.08e-07!63;UBERON:0000383!3.08e-07!63;UBERON:0005256!3.33e-07!143;UBERON:0000924!4.21e-07!173;UBERON:0006601!4.21e-07!173;UBERON:0004121!6.27e-07!169;UBERON:0000486!8.35e-07!82;UBERON:0000468!8.71e-07!659;UBERON:0002049!8.96e-07!79;UBERON:0007798!8.96e-07!79;UBERON:0000033!9.92e-07!123 | |ontology_enrichment_uberon=UBERON:0001017!8.46e-14!82;UBERON:0005743!2.57e-13!86;UBERON:0000073!4.34e-12!94;UBERON:0001016!4.34e-12!94;UBERON:0000914!1.06e-11!83;UBERON:0002329!1.06e-11!83;UBERON:0003077!1.06e-11!83;UBERON:0003059!1.06e-11!83;UBERON:0007282!1.06e-11!83;UBERON:0009618!1.06e-11!83;UBERON:0007285!1.06e-11!83;UBERON:0000955!3.96e-10!69;UBERON:0006238!3.96e-10!69;UBERON:0001049!4.59e-10!57;UBERON:0005068!4.59e-10!57;UBERON:0006241!4.59e-10!57;UBERON:0007135!4.59e-10!57;UBERON:0004290!2.64e-09!70;UBERON:0002616!2.95e-09!59;UBERON:0000119!4.69e-09!312;UBERON:0000483!9.51e-09!309;UBERON:0000025!3.69e-08!194;UBERON:0000475!4.77e-08!365;UBERON:0001134!1.04e-07!61;UBERON:0002036!1.04e-07!61;UBERON:0003082!1.04e-07!61;UBERON:0002346!2.14e-07!90;UBERON:0002020!2.66e-07!34;UBERON:0003528!2.66e-07!34;UBERON:0003075!2.91e-07!86;UBERON:0007284!2.91e-07!86;UBERON:0002385!3.08e-07!63;UBERON:0001015!3.08e-07!63;UBERON:0000383!3.08e-07!63;UBERON:0005256!3.33e-07!143;UBERON:0000924!4.21e-07!173;UBERON:0006601!4.21e-07!173;UBERON:0004121!6.27e-07!169;UBERON:0000486!8.35e-07!82;UBERON:0000468!8.71e-07!659;UBERON:0002049!8.96e-07!79;UBERON:0007798!8.96e-07!79;UBERON:0000033!9.92e-07!123 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p6@TUBA1A | |short_description=p6@TUBA1A | ||
}} | }} |
Latest revision as of 15:49, 18 September 2015
Short description: | p6@TUBA1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TUBA1A_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_AF141348_5end |
EntrezGene: | TUBA1A |
HGNC: | 20766 |
UniProt: | Q9UQM3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 8.10e-12 | 61 |
electrically active cell | 8.10e-12 | 61 |
muscle cell | 1.88e-09 | 55 |
muscle precursor cell | 2.93e-09 | 58 |
myoblast | 2.93e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.93e-09 | 58 |
smooth muscle cell | 2.27e-08 | 43 |
smooth muscle myoblast | 2.27e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 2.32e-12 | 78 |
dense mesenchyme tissue | 4.90e-12 | 73 |
paraxial mesoderm | 2.25e-11 | 72 |
presumptive paraxial mesoderm | 2.25e-11 | 72 |
somite | 1.10e-10 | 71 |
presomitic mesoderm | 1.10e-10 | 71 |
presumptive segmental plate | 1.10e-10 | 71 |
dermomyotome | 1.10e-10 | 71 |
trunk paraxial mesoderm | 1.10e-10 | 71 |
cell layer | 5.29e-10 | 309 |
epithelium | 8.14e-10 | 306 |
skeletal muscle tissue | 4.05e-09 | 62 |
striated muscle tissue | 4.05e-09 | 62 |
myotome | 4.05e-09 | 62 |
muscle tissue | 1.40e-08 | 64 |
musculature | 1.40e-08 | 64 |
musculature of body | 1.40e-08 | 64 |
trunk mesenchyme | 2.49e-08 | 122 |
multilaminar epithelium | 8.67e-08 | 83 |
tube | 4.45e-07 | 192 |
central nervous system | 5.57e-07 | 81 |