FFCP PHASE1:Hg19::chr11:61129646..61129657,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=220002 | |EntrezGene=220002 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23014 | |HGNC=23014 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=62bp_to_ENST00000535152_5end | |association_with_transcript=62bp_to_ENST00000535152_5end | ||
|cluster_id=chr11:61129646..61129657,- | |||
|description=CAGE_peak_5_at_CYBASC3_5end | |description=CAGE_peak_5_at_CYBASC3_5end | ||
|id=chr11:61129646..61129657,- | |id=chr11:61129646..61129657,- | ||
|ontology_enrichment_celltype=CL:0000012!8.70e-24!682;CL:0000548!2.41e-23!679;CL:0000004!2.41e-23!679;CL:0000255!2.41e-23!679;CL:0000144!4.65e-21!625;CL:0002371!1.86e-19!591;CL:0000063!3.45e-19!578;CL:0000003!1.12e-17!722;CL:0000723!2.87e-13!436;CL:0000048!3.83e-13!430;CL:0000034!1.98e-12!444;CL:0002009!2.54e-12!65;CL:0002194!1.39e-11!63;CL:0000576!1.39e-11!63;CL:0000040!1.39e-11!63;CL:0000559!1.39e-11!63;CL:0000134!1.96e-10!358;CL:0002320!3.29e-10!365;CL:0000557!7.55e-10!71;CL:0000839!1.15e-08!70;CL:0000219!1.69e-08!390;CL:0002087!3.23e-08!119;CL:0000766!9.13e-08!76;CL:0000738!1.93e-07!140;CL:0000860!2.52e-07!45;CL:0000359!2.89e-07!32;CL:0002031!9.35e-07!124 | |ontology_enrichment_celltype=CL:0000012!8.70e-24!682;CL:0000548!2.41e-23!679;CL:0000004!2.41e-23!679;CL:0000255!2.41e-23!679;CL:0000144!4.65e-21!625;CL:0002371!1.86e-19!591;CL:0000063!3.45e-19!578;CL:0000003!1.12e-17!722;CL:0000723!2.87e-13!436;CL:0000048!3.83e-13!430;CL:0000034!1.98e-12!444;CL:0002009!2.54e-12!65;CL:0002194!1.39e-11!63;CL:0000576!1.39e-11!63;CL:0000040!1.39e-11!63;CL:0000559!1.39e-11!63;CL:0000134!1.96e-10!358;CL:0002320!3.29e-10!365;CL:0000557!7.55e-10!71;CL:0000839!1.15e-08!70;CL:0000219!1.69e-08!390;CL:0002087!3.23e-08!119;CL:0000766!9.13e-08!76;CL:0000738!1.93e-07!140;CL:0000860!2.52e-07!45;CL:0000359!2.89e-07!32;CL:0002031!9.35e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.56e-07;32!CL:0000235;5.42e-07;6!CL:0000473;6.18e-07;39!CL:0000234;6.18e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,4.33e-12,61;CL:0002194,4.01e-11,59;CL:0000576,4.01e-11,59;CL:0000040,4.01e-11,59;CL:0000559,4.01e-11,59;CL:0000557,7.18e-10,67;CL:0000473,1.61e-09,48;CL:0000234,1.61e-09,48;CL:0000839,1.07e-08,66;CL:0000359,1.29e-07,32;CL:0000766,1.51e-07,72;CL:0000235,3.50e-07,6;CL:0002087,3.65e-07,115;CL:0000723,4.77e-07,433;CL:0000048,6.68e-07,427;CL:0000034,7.91e-07,441;CL:0002031,8.75e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.51e-10,76;UBERON:0002204,6.64e-10,167;UBERON:0004765,8.04e-10,90;UBERON:0001434,5.20e-09,100;UBERON:0003081,9.22e-09,203;UBERON:0001474,1.78e-08,82;UBERON:0002405,2.15e-07,93;UBERON:0002390,2.64e-07,98;UBERON:0003061,2.64e-07,98 | |||
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| ||
|short_description=p5@CYBASC3 | |short_description=p5@CYBASC3 | ||
}} | }} |
Latest revision as of 15:54, 18 September 2015
Short description: | p5@CYBASC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CYBASC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 62bp_to_ENST00000535152_5end |
EntrezGene: | CYBASC3 |
HGNC: | 23014 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 4.33e-12 | 61 |
monopoietic cell | 4.01e-11 | 59 |
monocyte | 4.01e-11 | 59 |
monoblast | 4.01e-11 | 59 |
promonocyte | 4.01e-11 | 59 |
granulocyte monocyte progenitor cell | 7.18e-10 | 67 |
defensive cell | 1.61e-09 | 48 |
phagocyte | 1.61e-09 | 48 |
myeloid lineage restricted progenitor cell | 1.07e-08 | 66 |
vascular associated smooth muscle cell | 1.29e-07 | 32 |
myeloid leukocyte | 1.51e-07 | 72 |
macrophage | 3.50e-07 | 6 |
nongranular leukocyte | 3.65e-07 | 115 |
somatic stem cell | 4.77e-07 | 433 |
multi fate stem cell | 6.68e-07 | 427 |
stem cell | 7.91e-07 | 441 |
hematopoietic lineage restricted progenitor cell | 8.75e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.51e-10 | 76 |
musculoskeletal system | 6.64e-10 | 167 |
skeletal element | 8.04e-10 | 90 |
skeletal system | 5.20e-09 | 100 |
lateral plate mesoderm | 9.22e-09 | 203 |
bone element | 1.78e-08 | 82 |
immune system | 2.15e-07 | 93 |
hematopoietic system | 2.64e-07 | 98 |
blood island | 2.64e-07 | 98 |