FFCP PHASE1:Hg19::chr2:85581666..85581696,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54884 | |EntrezGene=54884 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25991 | |HGNC=25991 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_ENST00000263854_5end | |association_with_transcript=-11bp_to_ENST00000263854_5end | ||
|cluster_id=chr2:85581666..85581696,- | |||
|coexpression_cluster_id=C892 | |coexpression_cluster_id=C892 | ||
|description=CAGE_peak_2_at_RETSAT_5end | |description=CAGE_peak_2_at_RETSAT_5end | ||
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|ontology_enrichment_celltype=CL:0000066!8.87e-11!254;CL:0000325!5.96e-09!39;CL:0000136!7.59e-09!15;CL:0000220!9.72e-09!246;CL:0000223!1.09e-08!59;CL:0002321!3.59e-08!248;CL:0002076!2.15e-07!43 | |ontology_enrichment_celltype=CL:0000066!8.87e-11!254;CL:0000325!5.96e-09!39;CL:0000136!7.59e-09!15;CL:0000220!9.72e-09!246;CL:0000223!1.09e-08!59;CL:0002321!3.59e-08!248;CL:0002076!2.15e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000136;5.98e-10;13 | |ontology_enrichment_celltype_v019=CL:0000136;5.98e-10;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.32e-10,253;CL:0000136,7.14e-09,15;CL:0000223,2.00e-08,58;CL:0002321,2.56e-08,250;CL:0002076,4.74e-07,42 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.58e-20!365;UBERON:0000481!5.47e-17!347;UBERON:0002100!4.93e-14!216;UBERON:0003104!4.66e-12!238;UBERON:0009142!4.66e-12!238;UBERON:0009569!3.11e-11!113;UBERON:0000483!3.98e-11!309;UBERON:0000119!5.78e-11!312;UBERON:0004119!6.30e-11!169;UBERON:0000925!6.30e-11!169;UBERON:0006595!6.30e-11!169;UBERON:0005177!6.16e-09!107;UBERON:0002417!7.71e-09!61;UBERON:0000916!7.71e-09!61;UBERON:0000466!8.76e-09!126;UBERON:0004921!9.02e-09!129;UBERON:0004185!9.02e-09!129;UBERON:0001007!1.12e-08!155;UBERON:0001555!1.12e-08!155;UBERON:0007026!1.12e-08!155;UBERON:0000467!1.48e-08!625;UBERON:0000480!1.65e-08!626;UBERON:0005256!1.93e-08!143;UBERON:0000468!2.29e-08!659;UBERON:0004111!4.26e-08!241;UBERON:0000477!4.35e-08!286;UBERON:0001008!1.06e-07!45;UBERON:0000062!1.18e-07!511;UBERON:0006554!1.70e-07!44;UBERON:0000923!1.83e-07!604;UBERON:0005291!1.83e-07!604;UBERON:0006598!1.83e-07!604;UBERON:0002532!1.83e-07!604;UBERON:0002050!2.90e-07!605;UBERON:0005423!2.90e-07!605;UBERON:0002365!3.81e-07!31;UBERON:0002330!3.81e-07!31 | |ontology_enrichment_uberon=UBERON:0000475!1.58e-20!365;UBERON:0000481!5.47e-17!347;UBERON:0002100!4.93e-14!216;UBERON:0003104!4.66e-12!238;UBERON:0009142!4.66e-12!238;UBERON:0009569!3.11e-11!113;UBERON:0000483!3.98e-11!309;UBERON:0000119!5.78e-11!312;UBERON:0004119!6.30e-11!169;UBERON:0000925!6.30e-11!169;UBERON:0006595!6.30e-11!169;UBERON:0005177!6.16e-09!107;UBERON:0002417!7.71e-09!61;UBERON:0000916!7.71e-09!61;UBERON:0000466!8.76e-09!126;UBERON:0004921!9.02e-09!129;UBERON:0004185!9.02e-09!129;UBERON:0001007!1.12e-08!155;UBERON:0001555!1.12e-08!155;UBERON:0007026!1.12e-08!155;UBERON:0000467!1.48e-08!625;UBERON:0000480!1.65e-08!626;UBERON:0005256!1.93e-08!143;UBERON:0000468!2.29e-08!659;UBERON:0004111!4.26e-08!241;UBERON:0000477!4.35e-08!286;UBERON:0001008!1.06e-07!45;UBERON:0000062!1.18e-07!511;UBERON:0006554!1.70e-07!44;UBERON:0000923!1.83e-07!604;UBERON:0005291!1.83e-07!604;UBERON:0006598!1.83e-07!604;UBERON:0002532!1.83e-07!604;UBERON:0002050!2.90e-07!605;UBERON:0005423!2.90e-07!605;UBERON:0002365!3.81e-07!31;UBERON:0002330!3.81e-07!31 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;5.27e-07;30!UBERON:0001008;5.27e-07;30!UBERON:0002365;5.90e-07;31!UBERON:0002330;5.90e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0006554;5.27e-07;30!UBERON:0001008;5.27e-07;30!UBERON:0002365;5.90e-07;31!UBERON:0002330;5.90e-07;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.05e-12,199;UBERON:0000483,5.76e-11,306;UBERON:0009569,5.79e-11,112;UBERON:0000119,8.37e-11,309;UBERON:0004119,2.90e-10,160;UBERON:0000925,2.90e-10,160;UBERON:0006595,2.90e-10,160;UBERON:0003104,1.62e-09,160;UBERON:0009142,1.62e-09,160;UBERON:0002417,4.65e-09,60;UBERON:0000916,4.65e-09,60;UBERON:0004921,1.59e-08,118;UBERON:0001007,4.26e-08,145;UBERON:0001555,4.26e-08,145;UBERON:0007026,4.26e-08,145;UBERON:0005177,8.39e-08,101;UBERON:0004111,1.38e-07,240;UBERON:0001008,2.27e-07,48;UBERON:0002365,3.01e-07,31;UBERON:0002330,3.01e-07,31;UBERON:0006554,3.62e-07,47;UBERON:0005172,6.83e-07,54;UBERON:0005173,6.83e-07,54;UBERON:0011216,7.69e-07,223 | |||
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| ||
|short_description=p2@RETSAT | |short_description=p2@RETSAT | ||
}} | }} |
Latest revision as of 16:01, 18 September 2015
Short description: | p2@RETSAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RETSAT_5end |
Coexpression cluster: | C892_mature_Adipocyte_liver_Hepatocyte_bile_lung_gall |
Association with transcript: | -11bp_to_ENST00000263854_5end |
EntrezGene: | RETSAT |
HGNC: | 25991 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.32e-10 | 253 |
fat cell | 7.14e-09 | 15 |
endodermal cell | 2.00e-08 | 58 |
embryonic cell | 2.56e-08 | 250 |
endo-epithelial cell | 4.74e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.05e-12 | 199 |
epithelium | 5.76e-11 | 306 |
subdivision of trunk | 5.79e-11 | 112 |
cell layer | 8.37e-11 | 309 |
endoderm-derived structure | 2.90e-10 | 160 |
endoderm | 2.90e-10 | 160 |
presumptive endoderm | 2.90e-10 | 160 |
mesenchyme | 1.62e-09 | 160 |
entire embryonic mesenchyme | 1.62e-09 | 160 |
abdominal segment of trunk | 4.65e-09 | 60 |
abdomen | 4.65e-09 | 60 |
subdivision of digestive tract | 1.59e-08 | 118 |
digestive system | 4.26e-08 | 145 |
digestive tract | 4.26e-08 | 145 |
primitive gut | 4.26e-08 | 145 |
trunk region element | 8.39e-08 | 101 |
anatomical conduit | 1.38e-07 | 240 |
renal system | 2.27e-07 | 48 |
exocrine gland | 3.01e-07 | 31 |
exocrine system | 3.01e-07 | 31 |
urinary system structure | 3.62e-07 | 47 |
abdomen element | 6.83e-07 | 54 |
abdominal segment element | 6.83e-07 | 54 |
organ system subdivision | 7.69e-07 | 223 |