FFCP PHASE1:Hg19::chr6:38607586..38607597,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114781 | |EntrezGene=114781 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21228 | |HGNC=21228 | ||
|TSSclassifier=strong | |||
|UniProt=C9JVC1 | |UniProt=C9JVC1 | ||
|association_with_transcript=46bp_to_ENST00000498633_5end | |association_with_transcript=46bp_to_ENST00000498633_5end | ||
|cluster_id=chr6:38607586..38607597,- | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_7_at_BTBD9_5end | |description=CAGE_peak_7_at_BTBD9_5end | ||
|id=chr6:38607586..38607597,- | |id=chr6:38607586..38607597,- | ||
|ontology_enrichment_celltype=CL:0000738!8.27e-29!140;CL:0000542!1.29e-27!53;CL:0000051!1.29e-27!53;CL:0000838!1.23e-26!52;CL:0002087!9.30e-25!119;CL:0000791!4.07e-22!18;CL:0000789!4.07e-22!18;CL:0002420!4.07e-22!18;CL:0002419!4.07e-22!18;CL:0000790!4.07e-22!18;CL:0002031!1.17e-21!124;CL:0000037!6.31e-20!172;CL:0000566!6.31e-20!172;CL:0000084!5.42e-18!25;CL:0000827!5.42e-18!25;CL:0000988!7.91e-18!182;CL:0002032!1.57e-17!165;CL:0000837!1.57e-17!165;CL:0000625!3.18e-14!11;CL:0000624!2.73e-11!6;CL:0000236!1.28e-10!14;CL:0000945!3.32e-07!24;CL:0000826!3.32e-07!24 | |ontology_enrichment_celltype=CL:0000738!8.27e-29!140;CL:0000542!1.29e-27!53;CL:0000051!1.29e-27!53;CL:0000838!1.23e-26!52;CL:0002087!9.30e-25!119;CL:0000791!4.07e-22!18;CL:0000789!4.07e-22!18;CL:0002420!4.07e-22!18;CL:0002419!4.07e-22!18;CL:0000790!4.07e-22!18;CL:0002031!1.17e-21!124;CL:0000037!6.31e-20!172;CL:0000566!6.31e-20!172;CL:0000084!5.42e-18!25;CL:0000827!5.42e-18!25;CL:0000988!7.91e-18!182;CL:0002032!1.57e-17!165;CL:0000837!1.57e-17!165;CL:0000625!3.18e-14!11;CL:0000624!2.73e-11!6;CL:0000236!1.28e-10!14;CL:0000945!3.32e-07!24;CL:0000826!3.32e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000791;6.72e-40;18!CL:0000789;6.72e-40;18!CL:0002419;6.72e-40;18!CL:0000624;1.14e-31;6!CL:0000084;4.91e-28;25!CL:0000542;1.56e-20;53!CL:0000623;6.68e-17;3!CL:0000625;1.09e-16;11!CL:0000226;2.63e-16;3!CL:0000842;2.63e-16;3!CL:0000898;3.89e-16;3!CL:0000815;2.40e-11;2!CL:0000792;2.40e-11;2!CL:0002677;2.40e-11;2!CL:0000236;1.50e-09;13!CL:0002087;1.57e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.52e-40,18;CL:0000789,6.52e-40,18;CL:0002420,6.52e-40,18;CL:0002419,6.52e-40,18;CL:0000790,6.52e-40,18;CL:0000838,6.99e-36,52;CL:0000542,4.05e-35,53;CL:0000051,4.05e-35,53;CL:0000624,1.20e-31,6;CL:0000084,4.81e-28,25;CL:0000827,4.81e-28,25;CL:0002087,1.44e-22,115;CL:0000738,7.66e-22,136;CL:0000623,6.87e-17,3;CL:0000825,6.87e-17,3;CL:0000625,1.04e-16,11;CL:0000037,1.35e-16,168;CL:0000226,2.85e-16,3;CL:0000842,2.85e-16,3;CL:0000898,4.10e-16,3;CL:0002031,6.43e-16,120;CL:0000988,1.84e-15,177;CL:0002032,3.52e-13,161;CL:0000837,3.52e-13,161;CL:0000815,1.95e-11,2;CL:0000792,1.95e-11,2;CL:0002677,1.95e-11,2;CL:0000236,6.20e-09,14 | |||
|ontology_enrichment_development_v019=CL:0000790;6.72e-40;18!CL:0000051;1.56e-20;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p7@BTBD9 | |short_description=p7@BTBD9 | ||
}} | }} |
Latest revision as of 16:07, 18 September 2015
Short description: | p7@BTBD9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_BTBD9_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | 46bp_to_ENST00000498633_5end |
EntrezGene: | BTBD9 |
HGNC: | 21228 |
UniProt: | C9JVC1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.52e-40 | 18 |
alpha-beta T cell | 6.52e-40 | 18 |
immature T cell | 6.52e-40 | 18 |
mature T cell | 6.52e-40 | 18 |
immature alpha-beta T cell | 6.52e-40 | 18 |
lymphoid lineage restricted progenitor cell | 6.99e-36 | 52 |
lymphocyte | 4.05e-35 | 53 |
common lymphoid progenitor | 4.05e-35 | 53 |
CD4-positive, alpha-beta T cell | 1.20e-31 | 6 |
T cell | 4.81e-28 | 25 |
pro-T cell | 4.81e-28 | 25 |
nongranular leukocyte | 1.44e-22 | 115 |
leukocyte | 7.66e-22 | 136 |
natural killer cell | 6.87e-17 | 3 |
pro-NK cell | 6.87e-17 | 3 |
CD8-positive, alpha-beta T cell | 1.04e-16 | 11 |
hematopoietic stem cell | 1.35e-16 | 168 |
single nucleate cell | 2.85e-16 | 3 |
mononuclear cell | 2.85e-16 | 3 |
naive T cell | 4.10e-16 | 3 |
hematopoietic lineage restricted progenitor cell | 6.43e-16 | 120 |
hematopoietic cell | 1.84e-15 | 177 |
hematopoietic oligopotent progenitor cell | 3.52e-13 | 161 |
hematopoietic multipotent progenitor cell | 3.52e-13 | 161 |
regulatory T cell | 1.95e-11 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.95e-11 | 2 |
naive regulatory T cell | 1.95e-11 | 2 |
B cell | 6.20e-09 | 14 |