FFCP PHASE1:Hg19::chr1:57110812..57110823,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5563 | |EntrezGene=5563 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9377 | |HGNC=9377 | ||
|TSSclassifier=strong | |||
|UniProt=P54646 | |UniProt=P54646 | ||
|association_with_transcript=-166bp_to_NM_006252,uc001cyk.3_5end | |association_with_transcript=-166bp_to_NM_006252,uc001cyk.3_5end | ||
|cluster_id=chr1:57110812..57110823,+ | |||
|description=CAGE_peak_4_at_PRKAA2_5end | |description=CAGE_peak_4_at_PRKAA2_5end | ||
|id=chr1:57110812..57110823,+ | |id=chr1:57110812..57110823,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002581;2.93e-23;1!CL:0002593;2.45e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,4.10e-23,1;CL:0002593,3.62e-12,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.17e-08;3!UBERON:0003104;6.04e-07;31 | |||
|ontology_enrichment_disease=DOID:3905!9.04e-08!9 | |||
|ontology_enrichment_disease_v019=DOID:5409;8.37e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,8.61e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.36e-29!115;UBERON:0001049!1.81e-24!57;UBERON:0005068!1.81e-24!57;UBERON:0006241!1.81e-24!57;UBERON:0007135!1.81e-24!57;UBERON:0002616!2.86e-23!59;UBERON:0003080!1.27e-22!42;UBERON:0000955!3.46e-22!69;UBERON:0006238!3.46e-22!69;UBERON:0001017!1.04e-21!82;UBERON:0005743!2.36e-21!86;UBERON:0002780!2.37e-21!41;UBERON:0001890!2.37e-21!41;UBERON:0006240!2.37e-21!41;UBERON:0001893!4.06e-21!34;UBERON:0002020!1.01e-20!34;UBERON:0003528!1.01e-20!34;UBERON:0002791!8.99e-20!33;UBERON:0002619!1.70e-19!22;UBERON:0000073!3.55e-19!94;UBERON:0001016!3.55e-19!94;UBERON:0001869!3.66e-19!32;UBERON:0003075!7.33e-19!86;UBERON:0007284!7.33e-19!86;UBERON:0002346!1.76e-17!90;UBERON:0001950!8.87e-17!20;UBERON:0000956!1.41e-16!25;UBERON:0000203!1.41e-16!25;UBERON:0003056!2.62e-16!61;UBERON:0000033!2.28e-14!123;UBERON:0000153!5.43e-14!129;UBERON:0007811!5.43e-14!129;UBERON:0000475!1.39e-12!365;UBERON:0000481!1.41e-12!347;UBERON:0000477!2.24e-10!286;UBERON:0004121!6.61e-10!169;UBERON:0000025!7.34e-10!194;UBERON:0004111!7.63e-10!241;UBERON:0001871!1.79e-09!7;UBERON:0000924!2.21e-09!173;UBERON:0006601!2.21e-09!173;UBERON:0000349!3.15e-09!5;UBERON:0000064!5.05e-09!219;UBERON:0000119!1.35e-08!312;UBERON:0002298!1.67e-08!8;UBERON:0000483!1.90e-08!309;UBERON:0000062!2.18e-08!511;UBERON:0000467!1.32e-07!625;UBERON:0000480!1.51e-07!626;UBERON:0000468!1.69e-07!659;UBERON:0000922!7.22e-07!612;UBERON:0000923!7.24e-07!604;UBERON:0005291!7.24e-07!604;UBERON:0006598!7.24e-07!604;UBERON:0002532!7.24e-07!604;UBERON:0002050!8.26e-07!605;UBERON:0005423!8.26e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;2.93e-23;1!UBERON:0000026;2.93e-23;1!UBERON:0008784;2.93e-23;1!UBERON:0006058;2.93e-23;1!UBERON:0003663;2.93e-23;1!UBERON:0004256;2.93e-23;1!UBERON:0004708;2.93e-23;1!UBERON:0002101;2.93e-23;1!UBERON:0004709;2.93e-23;1!UBERON:0002529;2.93e-23;1!UBERON:0010538;2.93e-23;1!UBERON:0003661;2.93e-23;1!UBERON:0010890;2.93e-23;1!UBERON:0002471;2.93e-23;1!UBERON:0001383;2.93e-23;1!UBERON:0010758;2.93e-23;1!UBERON:0010707;2.93e-23;1!UBERON:0000978;2.93e-23;1!UBERON:0002103;2.93e-23;1!UBERON:0001665;2.93e-23;1!UBERON:0003823;2.93e-23;1!UBERON:0000154;2.93e-23;1!UBERON:0010709;2.93e-23;1!UBERON:0001134;3.97e-13;16!UBERON:0002036;3.97e-13;16!UBERON:0002360;2.45e-12;2!UBERON:0005090;2.45e-12;2!UBERON:0001630;2.45e-12;2!UBERON:0000094;2.45e-12;2!UBERON:0005406;2.45e-12;2!UBERON:0002456;2.45e-12;2!UBERON:0010743;2.45e-12;2!UBERON:0002385;2.72e-07;31!UBERON:0001015;2.72e-07;31!UBERON:0000383;2.72e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,1.34e-23,1;UBERON:0001389,1.34e-23,1;UBERON:0000026,1.34e-23,1;UBERON:0008784,1.34e-23,1;UBERON:0006058,1.34e-23,1;UBERON:0003663,1.34e-23,1;UBERON:0004256,1.34e-23,1;UBERON:0004708,1.34e-23,1;UBERON:0002101,1.34e-23,1;UBERON:0004709,1.34e-23,1;UBERON:0002529,1.34e-23,1;UBERON:0010538,1.34e-23,1;UBERON:0003661,1.34e-23,1;UBERON:0010890,1.34e-23,1;UBERON:0002471,1.34e-23,1;UBERON:0001383,1.34e-23,1;UBERON:0004357,1.34e-23,1;UBERON:0004347,1.34e-23,1;UBERON:0005420,1.34e-23,1;UBERON:0005732,1.34e-23,1;UBERON:0010758,1.34e-23,1;UBERON:0010707,1.34e-23,1;UBERON:0000978,1.34e-23,1;UBERON:0002103,1.34e-23,1;UBERON:0001665,1.34e-23,1;UBERON:0003823,1.34e-23,1;UBERON:0000154,1.34e-23,1;UBERON:0010709,1.34e-23,1;UBERON:0005733,1.34e-23,1;UBERON:0005730,1.34e-23,1;UBERON:0005090,1.65e-12,2;UBERON:0001630,1.65e-12,2;UBERON:0005406,2.90e-12,2;UBERON:0002360,3.24e-12,2;UBERON:0000094,3.24e-12,2;UBERON:0010743,3.24e-12,2;UBERON:0002456,3.62e-12,2 | |||
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| ||
|short_description=p4@PRKAA2 | |short_description=p4@PRKAA2 | ||
}} | }} |
Latest revision as of 16:17, 18 September 2015
Short description: | p4@PRKAA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PRKAA2_5end |
Coexpression cluster: | NA |
Association with transcript: | -166bp_to_NM_006252, uc001cyk.3_5end |
EntrezGene: | PRKAA2 |
HGNC: | 9377 |
UniProt: | P54646 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 4.10e-23 | 1 |
smooth muscle cell of the internal thoracic artery | 3.62e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 1.34e-23 | 1 |
soleus muscle | 1.34e-23 | 1 |
appendage | 1.34e-23 | 1 |
lower limb segment | 1.34e-23 | 1 |
multi-limb segment region | 1.34e-23 | 1 |
hindlimb muscle | 1.34e-23 | 1 |
hindlimb zeugopod muscle | 1.34e-23 | 1 |
paired limb/fin | 1.34e-23 | 1 |
limb | 1.34e-23 | 1 |
pelvic appendage | 1.34e-23 | 1 |
limb segment | 1.34e-23 | 1 |
paired limb/fin segment | 1.34e-23 | 1 |
limb muscle | 1.34e-23 | 1 |
pelvic complex muscle | 1.34e-23 | 1 |
zeugopod | 1.34e-23 | 1 |
muscle of leg | 1.34e-23 | 1 |
paired limb/fin bud | 1.34e-23 | 1 |
limb bud | 1.34e-23 | 1 |
pelvic appendage bud | 1.34e-23 | 1 |
limb/fin field | 1.34e-23 | 1 |
subdivision of organism along appendicular axis | 1.34e-23 | 1 |
appendage girdle complex | 1.34e-23 | 1 |
leg | 1.34e-23 | 1 |
hindlimb | 1.34e-23 | 1 |
triceps surae | 1.34e-23 | 1 |
hindlimb zeugopod | 1.34e-23 | 1 |
posterior region of body | 1.34e-23 | 1 |
pelvic complex | 1.34e-23 | 1 |
limb field | 1.34e-23 | 1 |
hindlimb/pelvic fin field | 1.34e-23 | 1 |
muscle structure | 1.65e-12 | 2 |
muscle organ | 1.65e-12 | 2 |
perirenal fat | 2.90e-12 | 2 |
meninx | 3.24e-12 | 2 |
membrane organ | 3.24e-12 | 2 |
meningeal cluster | 3.24e-12 | 2 |
internal thoracic artery | 3.62e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.61e-07 | 4 |