FFCP PHASE1:Hg19::chr6:4031824..4031846,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8899 | |EntrezGene=8899 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=17346 | |HGNC=17346 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=31bp_to_ENST00000489943_5end | |association_with_transcript=31bp_to_ENST00000489943_5end | ||
|cluster_id=chr6:4031824..4031846,+ | |||
|description=CAGE_peak_5_at_PRPF4B_5end | |description=CAGE_peak_5_at_PRPF4B_5end | ||
|id=chr6:4031824..4031846,+ | |id=chr6:4031824..4031846,+ | ||
|ontology_enrichment_celltype=CL:0000860!7.19e-08!45;CL:0002087!3.04e-07!119;CL:0002057!3.51e-07!42;CL:0002032!6.64e-07!165;CL:0000837!6.64e-07!165 | |ontology_enrichment_celltype=CL:0000860!7.19e-08!45;CL:0002087!3.04e-07!119;CL:0002057!3.51e-07!42;CL:0002032!6.64e-07!165;CL:0000837!6.64e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.47e-09;33!CL:0002057;1.47e-09;33!CL:0000473;2.95e-07;39!CL:0000234;2.95e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.52e-08,42;CL:0002057,2.52e-08,42;CL:0002087,3.65e-08,115;CL:0002032,1.10e-07,161;CL:0000837,1.10e-07,161;CL:0000473,1.16e-07,48;CL:0000234,1.16e-07,48;CL:0000037,1.93e-07,168 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!9.06e-12!235;DOID:14566!3.22e-11!239;DOID:0050687!5.15e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.87e-07!94;UBERON:0001016!1.87e-07!94;UBERON:0001017!2.12e-07!82;UBERON:0001049!2.45e-07!57;UBERON:0005068!2.45e-07!57;UBERON:0006241!2.45e-07!57;UBERON:0007135!2.45e-07!57 | |ontology_enrichment_uberon=UBERON:0000073!1.87e-07!94;UBERON:0001016!1.87e-07!94;UBERON:0001017!2.12e-07!82;UBERON:0001049!2.45e-07!57;UBERON:0005068!2.45e-07!57;UBERON:0006241!2.45e-07!57;UBERON:0007135!2.45e-07!57 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.50e-10,89;UBERON:0001049,2.58e-09,56;UBERON:0005068,2.58e-09,56;UBERON:0006241,2.58e-09,56;UBERON:0007135,2.58e-09,56;UBERON:0001017,4.37e-09,81;UBERON:0000073,4.29e-08,53;UBERON:0002616,4.29e-08,53;UBERON:0003528,1.55e-07,34;UBERON:0002020,1.55e-07,34;UBERON:0000955,9.29e-07,68;UBERON:0006238,9.29e-07,68 | |||
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| ||
|short_description=p5@PRPF4B | |short_description=p5@PRPF4B | ||
}} | }} |
Latest revision as of 17:29, 18 September 2015
Short description: | p5@PRPF4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PRPF4B_5end |
Coexpression cluster: | NA |
Association with transcript: | 31bp_to_ENST00000489943_5end |
EntrezGene: | PRPF4B |
HGNC: | 17346 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.52e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.52e-08 | 42 |
nongranular leukocyte | 3.65e-08 | 115 |
hematopoietic oligopotent progenitor cell | 1.10e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.10e-07 | 161 |
defensive cell | 1.16e-07 | 48 |
phagocyte | 1.16e-07 | 48 |
hematopoietic stem cell | 1.93e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
nervous system | 9.50e-10 | 89 |
neural tube | 2.58e-09 | 56 |
neural rod | 2.58e-09 | 56 |
future spinal cord | 2.58e-09 | 56 |
neural keel | 2.58e-09 | 56 |
central nervous system | 4.37e-09 | 81 |
regional part of nervous system | 4.29e-08 | 53 |
regional part of brain | 4.29e-08 | 53 |
brain grey matter | 1.55e-07 | 34 |
gray matter | 1.55e-07 | 34 |
brain | 9.29e-07 | 68 |
future brain | 9.29e-07 | 68 |