FFCP PHASE1:Hg19::chr14:105391147..105391158,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=122618 | |EntrezGene=122618 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23792 | |HGNC=23792 | ||
|TSSclassifier=strong | |||
|UniProt=F5H2B5 | |UniProt=F5H2B5 | ||
|association_with_transcript=0bp_to_ENST00000540372_5end | |association_with_transcript=0bp_to_ENST00000540372_5end | ||
|cluster_id=chr14:105391147..105391158,+ | |||
|coexpression_cluster_id=C44 | |coexpression_cluster_id=C44 | ||
|description=CAGE_peak_2_at_PLD4_5end | |description=CAGE_peak_2_at_PLD4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!5.37e-24!24;CL:0000826!5.37e-24!24;CL:0000236!1.09e-22!14;CL:0000037!3.71e-20!172;CL:0000566!3.71e-20!172;CL:0000988!2.53e-18!182;CL:0002032!9.03e-15!165;CL:0000837!9.03e-15!165;CL:0000738!8.89e-14!140;CL:0002087!3.46e-13!119;CL:0000542!6.52e-11!53;CL:0000051!6.52e-11!53;CL:0000838!8.07e-10!52;CL:0000784!6.43e-09!3;CL:0002031!1.27e-08!124;CL:0000842!4.73e-08!3;CL:0000817!1.54e-07!3 | |ontology_enrichment_celltype=CL:0000945!5.37e-24!24;CL:0000826!5.37e-24!24;CL:0000236!1.09e-22!14;CL:0000037!3.71e-20!172;CL:0000566!3.71e-20!172;CL:0000988!2.53e-18!182;CL:0002032!9.03e-15!165;CL:0000837!9.03e-15!165;CL:0000738!8.89e-14!140;CL:0002087!3.46e-13!119;CL:0000542!6.52e-11!53;CL:0000051!6.52e-11!53;CL:0000838!8.07e-10!52;CL:0000784!6.43e-09!3;CL:0002031!1.27e-08!124;CL:0000842!4.73e-08!3;CL:0000817!1.54e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000784;5.08e-29;3!CL:0000236;2.24e-24;13!CL:0000945;4.89e-13;24!CL:0002032;1.81e-10;1!CL:0000557;1.81e-10;1!CL:0000037;2.87e-10;1!CL:0001024;2.87e-10;1!CL:0000817;4.14e-10;1!CL:0000451;2.57e-08;10 | |ontology_enrichment_celltype_v019=CL:0000784;5.08e-29;3!CL:0000236;2.24e-24;13!CL:0000945;4.89e-13;24!CL:0002032;1.81e-10;1!CL:0000557;1.81e-10;1!CL:0000037;2.87e-10;1!CL:0001024;2.87e-10;1!CL:0000817;4.14e-10;1!CL:0000451;2.57e-08;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000784,5.09e-29,3;CL:0000236,1.32e-22,14;CL:0000037,1.20e-20,168;CL:0000988,1.89e-19,177;CL:0002032,3.13e-15,161;CL:0000837,3.13e-15,161;CL:0000945,4.95e-13,24;CL:0000826,4.95e-13,24;CL:0000738,1.09e-10,136;CL:0001024,3.01e-10,1;CL:0000763,2.16e-08,108;CL:0000049,2.16e-08,108;CL:0000451,2.57e-08,10;CL:0000134,3.77e-08,354;CL:0002320,6.29e-08,361;CL:0002087,9.75e-08,115;CL:0000542,1.48e-07,53;CL:0000051,1.48e-07,53;CL:0000219,3.84e-07,386;CL:0000034,9.09e-07,441 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1240!2.34e-09!39;DOID:8692!4.27e-09!31;DOID:2531!1.68e-08!51;DOID:0060083!1.68e-08!51 | |ontology_enrichment_disease=DOID:1240!2.34e-09!39;DOID:8692!4.27e-09!31;DOID:2531!1.68e-08!51;DOID:0060083!1.68e-08!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.21e-17;31!DOID:1240;1.99e-16;39!DOID:12603;2.87e-10;1!DOID:2531;1.21e-08;51!DOID:0060083;1.21e-08;51 | |ontology_enrichment_disease_v019=DOID:8692;1.21e-17;31!DOID:1240;1.99e-16;39!DOID:12603;2.87e-10;1!DOID:2531;1.21e-08;51!DOID:0060083;1.21e-08;51 | ||
|ontology_enrichment_disease_v019_2=DOID:1240,9.83e-22,39;DOID:8692,6.92e-18,31;DOID:2531,2.81e-16,51;DOID:0060083,2.81e-16,51;DOID:12603,3.29e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.26e-12!57;UBERON:0005068!5.26e-12!57;UBERON:0006241!5.26e-12!57;UBERON:0007135!5.26e-12!57;UBERON:0007023!3.02e-11!115;UBERON:0002619!1.16e-10!22;UBERON:0002780!1.64e-10!41;UBERON:0001890!1.64e-10!41;UBERON:0006240!1.64e-10!41;UBERON:0002616!3.52e-10!59;UBERON:0003080!3.59e-10!42;UBERON:0001893!3.95e-10!34;UBERON:0001950!8.01e-10!20;UBERON:0001017!3.48e-09!82;UBERON:0000956!3.93e-09!25;UBERON:0000203!3.93e-09!25;UBERON:0002791!4.26e-09!33;UBERON:0000955!9.09e-09!69;UBERON:0006238!9.09e-09!69;UBERON:0002020!1.27e-08!34;UBERON:0003528!1.27e-08!34;UBERON:0005743!1.68e-08!86;UBERON:0001869!6.93e-08!32;UBERON:0003075!8.05e-08!86;UBERON:0007284!8.05e-08!86;UBERON:0002346!3.07e-07!90;UBERON:0000073!3.48e-07!94;UBERON:0001016!3.48e-07!94 | |ontology_enrichment_uberon=UBERON:0001049!5.26e-12!57;UBERON:0005068!5.26e-12!57;UBERON:0006241!5.26e-12!57;UBERON:0007135!5.26e-12!57;UBERON:0007023!3.02e-11!115;UBERON:0002619!1.16e-10!22;UBERON:0002780!1.64e-10!41;UBERON:0001890!1.64e-10!41;UBERON:0006240!1.64e-10!41;UBERON:0002616!3.52e-10!59;UBERON:0003080!3.59e-10!42;UBERON:0001893!3.95e-10!34;UBERON:0001950!8.01e-10!20;UBERON:0001017!3.48e-09!82;UBERON:0000956!3.93e-09!25;UBERON:0000203!3.93e-09!25;UBERON:0002791!4.26e-09!33;UBERON:0000955!9.09e-09!69;UBERON:0006238!9.09e-09!69;UBERON:0002020!1.27e-08!34;UBERON:0003528!1.27e-08!34;UBERON:0005743!1.68e-08!86;UBERON:0001869!6.93e-08!32;UBERON:0003075!8.05e-08!86;UBERON:0007284!8.05e-08!86;UBERON:0002346!3.07e-07!90;UBERON:0000073!3.48e-07!94;UBERON:0001016!3.48e-07!94 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.27e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.236132343941038,0.786728553697808,0,1.54816123316076,0,0,0,0,0,2.34880351467878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0.422510572623884,0,0,0.112328631146495,0,0,0.285012743741249,0.19891667719909,0,3.51992488922645,0,1.77901850772711,0.426730222566507,0.800791974072025,1.72425731986345,3.30522436392431,6.67837628174755,0,0.587237189370939,0.382273228125229,0,0,3.95076127162616,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,75.8400185290987,79.5072925984378,43.4605276555591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.647142602455851,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,2.22963810150862,1.58696134274089,0,0,0,0.766021480529467,0.635020748171649,2.921597462471,0,3.87998954356427,0,0,0.338583555603207,0.802940375518498,2.42159648629257,4.68430861459359,0,7.37377834340299,4.47352215784832,5.67287081820489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0,0,0,0,3.06943422136123,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,0.937057782901357,0.547364367646998,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83239764200917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0.544813624446302,0,0,0,0,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.443716206147409,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533458648470704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.826747186004736,0.19024743058172,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0.4226557275834,0,0.187967835959707,0.257831551894309,0,0,0,0,0,0.458729283404541,0.430018749454354,0,0.407948941145488,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0.193766729508018,0.186224142887574,0,0,0,0,0,0.5388164241167,0,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.236132343941038,0.786728553697808,0,1.54816123316076,0,0,0,0,0,2.34880351467878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0.422510572623884,0,0,0.112328631146495,0,0,0.285012743741249,0.19891667719909,0,3.51992488922645,0,1.77901850772711,0.426730222566507,0.800791974072025,1.72425731986345,3.30522436392431,6.67837628174755,0,0.587237189370939,0.382273228125229,0,0,3.95076127162616,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,75.8400185290987,79.5072925984378,43.4605276555591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.647142602455851,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,2.22963810150862,1.58696134274089,0,0,0,0.766021480529467,0.635020748171649,2.921597462471,0,3.87998954356427,0,0,0.338583555603207,0.802940375518498,2.42159648629257,4.68430861459359,0,7.37377834340299,4.47352215784832,5.67287081820489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0,0,0,0,3.06943422136123,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,0.937057782901357,0.547364367646998,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83239764200917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0.544813624446302,0,0,0,0,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.443716206147409,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533458648470704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.826747186004736,0.19024743058172,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0.4226557275834,0,0.187967835959707,0.257831551894309,0,0,0,0,0,0.458729283404541,0.430018749454354,0,0.407948941145488,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0.193766729508018,0.186224142887574,0,0,0,0,0,0.5388164241167,0,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0.641136984606466 | ||
|short_description=p2@PLD4 | |short_description=p2@PLD4 | ||
}} | }} |
Latest revision as of 17:42, 18 September 2015
Short description: | p2@PLD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PLD4_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 0bp_to_ENST00000540372_5end |
EntrezGene: | PLD4 |
HGNC: | 23792 |
UniProt: | F5H2B5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 5.09e-29 | 3 |
B cell | 1.32e-22 | 14 |
hematopoietic stem cell | 1.20e-20 | 168 |
hematopoietic cell | 1.89e-19 | 177 |
hematopoietic oligopotent progenitor cell | 3.13e-15 | 161 |
hematopoietic multipotent progenitor cell | 3.13e-15 | 161 |
lymphocyte of B lineage | 4.95e-13 | 24 |
pro-B cell | 4.95e-13 | 24 |
leukocyte | 1.09e-10 | 136 |
CD34-positive, CD38-negative hematopoietic stem cell | 3.01e-10 | 1 |
myeloid cell | 2.16e-08 | 108 |
common myeloid progenitor | 2.16e-08 | 108 |
dendritic cell | 2.57e-08 | 10 |
mesenchymal cell | 3.77e-08 | 354 |
connective tissue cell | 6.29e-08 | 361 |
nongranular leukocyte | 9.75e-08 | 115 |
lymphocyte | 1.48e-07 | 53 |
common lymphoid progenitor | 1.48e-07 | 53 |
motile cell | 3.84e-07 | 386 |
stem cell | 9.09e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.27e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
leukemia | 9.83e-22 | 39 |
myeloid leukemia | 6.92e-18 | 31 |
hematologic cancer | 2.81e-16 | 51 |
immune system cancer | 2.81e-16 | 51 |
acute leukemia | 3.29e-10 | 1 |