FFCP PHASE1:Hg19::chr8:6264045..6264105,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100287015 | |EntrezGene=100287015 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000500118,NR_040040,uc003wqf.2_5end | |association_with_transcript=0bp_to_ENST00000500118,NR_040040,uc003wqf.2_5end | ||
|cluster_id=chr8:6264045..6264105,- | |||
|description=CAGE_peak_1_at_LOC100287015_5end | |description=CAGE_peak_1_at_LOC100287015_5end | ||
|id=chr8:6264045..6264105,- | |id=chr8:6264045..6264105,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!2.06e-08!129;UBERON:0007811!2.06e-08!129;UBERON:0000033!2.53e-08!123;UBERON:0002346!3.13e-08!90;UBERON:0003075!9.41e-08!86;UBERON:0007284!9.41e-08!86;UBERON:0000064!1.10e-07!219;UBERON:0003056!1.65e-07!61;UBERON:0000955!4.48e-07!69;UBERON:0006238!4.48e-07!69;UBERON:0001049!6.89e-07!57;UBERON:0005068!6.89e-07!57;UBERON:0006241!6.89e-07!57;UBERON:0007135!6.89e-07!57;UBERON:0002616!9.96e-07!59 | |ontology_enrichment_uberon=UBERON:0000153!2.06e-08!129;UBERON:0007811!2.06e-08!129;UBERON:0000033!2.53e-08!123;UBERON:0002346!3.13e-08!90;UBERON:0003075!9.41e-08!86;UBERON:0007284!9.41e-08!86;UBERON:0000064!1.10e-07!219;UBERON:0003056!1.65e-07!61;UBERON:0000955!4.48e-07!69;UBERON:0006238!4.48e-07!69;UBERON:0001049!6.89e-07!57;UBERON:0005068!6.89e-07!57;UBERON:0006241!6.89e-07!57;UBERON:0007135!6.89e-07!57;UBERON:0002616!9.96e-07!59 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,9.96e-10,86;UBERON:0003075,3.13e-09,82;UBERON:0007284,3.13e-09,82;UBERON:0003056,3.96e-08,61;UBERON:0010371,5.50e-08,104;UBERON:0000955,1.68e-07,68;UBERON:0006238,1.68e-07,68;UBERON:0001049,2.33e-07,56;UBERON:0005068,2.33e-07,56;UBERON:0006241,2.33e-07,56;UBERON:0007135,2.33e-07,56;UBERON:0000073,3.67e-07,53;UBERON:0002616,3.67e-07,53;UBERON:0001017,7.12e-07,81 | |||
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| ||
|short_description=p1@LOC100287015 | |short_description=p1@LOC100287015 | ||
}} | }} |
Latest revision as of 17:48, 18 September 2015
Short description: | p1@LOC100287015 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100287015_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000500118, NR_040040, uc003wqf.2_5end |
EntrezGene: | LOC100287015 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 9.96e-10 | 86 |
neural plate | 3.13e-09 | 82 |
presumptive neural plate | 3.13e-09 | 82 |
pre-chordal neural plate | 3.96e-08 | 61 |
ecto-epithelium | 5.50e-08 | 104 |
brain | 1.68e-07 | 68 |
future brain | 1.68e-07 | 68 |
neural tube | 2.33e-07 | 56 |
neural rod | 2.33e-07 | 56 |
future spinal cord | 2.33e-07 | 56 |
neural keel | 2.33e-07 | 56 |
regional part of nervous system | 3.67e-07 | 53 |
regional part of brain | 3.67e-07 | 53 |
central nervous system | 7.12e-07 | 81 |