FFCP PHASE1:Hg19::chr5:76382989..76383001,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84327 | |EntrezGene=84327 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20711 | |HGNC=20711 | ||
|TSSclassifier=strong | |||
|UniProt=D6RIC4 | |UniProt=D6RIC4 | ||
|association_with_transcript=6bp_to_ENST00000511587_5end | |association_with_transcript=6bp_to_ENST00000511587_5end | ||
|cluster_id=chr5:76382989..76383001,- | |||
|coexpression_cluster_id=C220 | |coexpression_cluster_id=C220 | ||
|description=CAGE_peak_4_at_ZBED3_5end | |description=CAGE_peak_4_at_ZBED3_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.68e-31;13!CL:0002521;8.43e-21;3!CL:0002615;2.13e-20;3 | |ontology_enrichment_celltype_v019=CL:0000136;1.68e-31;13!CL:0002521;8.43e-21;3!CL:0002615;2.13e-20;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.89e-27,15;CL:0002521,4.97e-21,3;CL:0002615,3.39e-20,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:9119;4.50e-08;1 | |ontology_enrichment_disease_v019=DOID:9119;4.50e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:9119,4.66e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.32e-09!115;UBERON:0001049!5.05e-09!57;UBERON:0005068!5.05e-09!57;UBERON:0006241!5.05e-09!57;UBERON:0007135!5.05e-09!57;UBERON:0000073!1.29e-08!94;UBERON:0001016!1.29e-08!94;UBERON:0001017!2.81e-08!82;UBERON:0005743!3.30e-08!86;UBERON:0000955!5.96e-08!69;UBERON:0006238!5.96e-08!69;UBERON:0002346!7.16e-08!90;UBERON:0003075!1.67e-07!86;UBERON:0007284!1.67e-07!86;UBERON:0002616!3.36e-07!59 | |ontology_enrichment_uberon=UBERON:0007023!1.32e-09!115;UBERON:0001049!5.05e-09!57;UBERON:0005068!5.05e-09!57;UBERON:0006241!5.05e-09!57;UBERON:0007135!5.05e-09!57;UBERON:0000073!1.29e-08!94;UBERON:0001016!1.29e-08!94;UBERON:0001017!2.81e-08!82;UBERON:0005743!3.30e-08!86;UBERON:0000955!5.96e-08!69;UBERON:0006238!5.96e-08!69;UBERON:0002346!7.16e-08!90;UBERON:0003075!1.67e-07!86;UBERON:0007284!1.67e-07!86;UBERON:0002616!3.36e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0002190;8.43e-21;3!UBERON:0002072;1.06e-12;5!UBERON:0003688;1.81e-10;6!UBERON:0002358;1.81e-10;6!UBERON:0003684;1.81e-10;6!UBERON:0001178;1.81e-10;6!UBERON:0002038;4.50e-08;1!UBERON:0009661;4.50e-08;1!UBERON:0002950;4.50e-08;1!UBERON:0001891;4.50e-08;1!UBERON:0001013;7.51e-08;14!UBERON:0001301;1.11e-07;1!UBERON:0004457;3.97e-07;9!UBERON:0000042;3.97e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0002190;8.43e-21;3!UBERON:0002072;1.06e-12;5!UBERON:0003688;1.81e-10;6!UBERON:0002358;1.81e-10;6!UBERON:0003684;1.81e-10;6!UBERON:0001178;1.81e-10;6!UBERON:0002038;4.50e-08;1!UBERON:0009661;4.50e-08;1!UBERON:0002950;4.50e-08;1!UBERON:0001891;4.50e-08;1!UBERON:0001013;7.51e-08;14!UBERON:0001301;1.11e-07;1!UBERON:0004457;3.97e-07;9!UBERON:0000042;3.97e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,4.97e-21,3;UBERON:0002072,7.75e-13,5;UBERON:0003688,2.27e-10,6;UBERON:0002358,2.27e-10,6;UBERON:0003684,2.27e-10,6;UBERON:0001178,2.27e-10,6;UBERON:0002038,4.35e-08,1;UBERON:0009661,4.35e-08,1;UBERON:0002950,4.35e-08,1;UBERON:0001891,4.35e-08,1;UBERON:0009616,4.35e-08,1;UBERON:0010286,4.35e-08,1;UBERON:0001013,6.94e-08,14;UBERON:0001301,9.10e-08,1;UBERON:0005103,1.02e-07,8;UBERON:0000083,1.02e-07,8;UBERON:0009201,1.02e-07,8;UBERON:0006553,1.02e-07,8;UBERON:0003074,1.02e-07,8;UBERON:0003060,1.02e-07,8;UBERON:0000080,6.55e-07,9;UBERON:0002120,6.55e-07,9;UBERON:0004875,6.55e-07,9;UBERON:0005721,6.55e-07,9;UBERON:0005754,6.55e-07,9;UBERON:0007297,6.55e-07,9 | |||
|phase1_expression=0,5.78071414505655,2.96004248601539,1.0007329835313,2.23480547213644,0,12.6649939084155,1.89515962028049,13.5816526663916,0,0,0,0,0.618831764800233,0,0,0,0,0,0.123121058076788,0,0.940364164434263,0,0.547497700291537,0.125542639594803,0.0764134057479513,0,0,0,0,0.309632246632152,0,0,0,0,0,0.293600439334847,0,0,0,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0.242584061187816,0.232429036905685,0.411167888021826,0.309706370895104,0,0.256160706529101,0,0.344745680736619,1.29096936716765,1.35426486594342,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.403213486449465,0.534880391567015,0,0,0,0.511450247374121,0,0,0,0,0,0.189069634328136,0,0.43917392846563,0.392937226493138,0,0.741568885568859,0,0.348259474598534,0.531831842075461,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0.258416759169329,0.35576626268671,0.66944122552934,0.402829317109147,0,0.732186172644509,0,0,0.625098097988558,1.12264686313085,0.112611480483322,0,0,0.549605231791222,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,0,1.15235184896,0.234321431833797,0,0,0,0.23486899728753,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0.946454400318751,0.842923450390509,0.241011029883482,0.110293972732394,0.653638332277218,0,0.539325232640658,0,0.38474715694639,0.738155454624648,0,0,0,1.26755034821831,0,0,0,0,0,0.109750285408626,0,0,0,0.325808305310325,0,1.44331342025273,0.34779121492523,0,0,0,0.190254152234598,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0.492663237895943,0,0,0.144119953416961,0.25248486685276,0.190493682876507,1.14596527667483,0,0,0.205654985406647,0.600686115687835,0.857479297891735,0.560655421726804,0,0.1466765716419,0.258543431515556,0,0,0,0,0,2.83698264046557,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0.431255149719035,0.128343036279748,1.01637849688985,0,0,0,0.637938751653163,0,0,0,0.24538298343828,0,0.542530047399471,0.207970861530807,0,0,0.35142424497814,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0,3.13281851940385,0.686286847621712,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.362578348774867,0,0,0.34444334449382,0.182091168006717,0.131124414959424,0,0,0,0,0.105551628892876,1.13733384070897,0.340187410553031,0.215915916102139,1.54227252690289,0.270946437543853,0,0,0,0,0,0,0,0,0.325378394664303,0,0.54941678891006,0.082509499920588,0,0,0,0.386682873168488,0.616194468458578,0.460511024178389,0,0.214840489736547,0.145016693914229,0.0852266274161009,0.356128142586949,0,0.192190067365106,0,0.30347334256665,0.464845549297286,0,0,0,0,0.869932992075073,0,0,0,0,0,0.255897791311334,2.1396949401696,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0.557409525377156,0.28853842595289,0.142283686696828,0.159426272728822,0,0.191505370132367,0.635020748171649,0.324621940274555,0.842391534340376,0.912938716132769,0,0,0,0,0,0.425846237690326,0.343505344755765,0,0,0,0,0,0,0,2.33150377598474,0,0,2.05111450980652,0.121360521749513,0,0,0.23874448473769,0,0,0,0.281338832821026,0.222617410045812,0.16480387422676,0.63337622438398,0.597743964753209,0.276283915531148,0,0.20453736500431,0,0,0.179736702294654,0.358042349351218,0,0.0986434056369336,0,0,0,0.278304294485554,1.99613798001194,0,0.174919999992391,2.89999830173917,0,0,0,0,0,0.347249989866585,0.885741385813839,0.361789315876224,0,0.552896299656123,0.591095237907095,0.219385397153973,0.21787692703798,0,0.153900517007594,0.227884111694002,0,0.0897576444097721,0,0,0,0,0,0.31396051279005,0.166211681900156,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0.176915129006678,0,0,0.370691816839509,0,0.808813595768125,0,0.468528891450678,0,0,0.485560759068186,0,0,0.30607276163049,0.252746318513952,0.751617097072463,0.311064574191741,0,0,0.313932918407225,0,0,0,0,0,0,1.39781334593624,0,0.290268993867255,0.365446585430928,0.164230914106418,0,0.617792886840502,0.677942222341597,0,0,0.316553979779393,0.195551382734803,0.0801588202515337,0,0.19980960958213,0.144090417154106,0.572682980829578,0.514784993585894,0,0.372757606696298,0.235694034616795,0.407712618220842,0,0.101998217636322,0.577901179803038,0,1.36905378891993,0,0,0,0,0.916641696046735,0,0.399358000997982,0,0.223171457441873,0.268733889946905,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0.393709926058995,0,0,0.408610218334727,0,0,0,0,0,0.303747783290123,0,0.788057072991982,0.472091293214983,0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| ||
|short_description=p4@ZBED3 | |short_description=p4@ZBED3 | ||
}} | }} |
Latest revision as of 19:11, 18 September 2015
Short description: | p4@ZBED3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ZBED3_5end |
Coexpression cluster: | C220_Adipocyte_mature_left_breast_skin_liver_adipose |
Association with transcript: | 6bp_to_ENST00000511587_5end |
EntrezGene: | ZBED3 |
HGNC: | 20711 |
UniProt: | D6RIC4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.89e-27 | 15 |
subcutaneous fat cell | 4.97e-21 | 3 |
adipocyte of omentum tissue | 3.39e-20 | 3 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 4.97e-21 | 3 |
hypodermis | 7.75e-13 | 5 |
omentum | 2.27e-10 | 6 |
peritoneum | 2.27e-10 | 6 |
abdominal cavity | 2.27e-10 | 6 |
visceral peritoneum | 2.27e-10 | 6 |
substantia nigra | 4.35e-08 | 1 |
midbrain nucleus | 4.35e-08 | 1 |
regional part of midbrain | 4.35e-08 | 1 |
midbrain | 4.35e-08 | 1 |
presumptive midbrain | 4.35e-08 | 1 |
midbrain neural tube | 4.35e-08 | 1 |
adipose tissue | 6.94e-08 | 14 |
epididymis | 9.10e-08 | 1 |
mesonephric epithelium | 1.02e-07 | 8 |
mesonephric tubule | 1.02e-07 | 8 |
nephric duct | 1.02e-07 | 8 |
renal duct | 1.02e-07 | 8 |
mesonephric duct | 1.02e-07 | 8 |
pronephric duct | 1.02e-07 | 8 |
mesonephros | 6.55e-07 | 9 |
pronephros | 6.55e-07 | 9 |
nephrogenic cord | 6.55e-07 | 9 |
pronephric mesoderm | 6.55e-07 | 9 |
rostral part of nephrogenic cord | 6.55e-07 | 9 |
presumptive pronephric mesoderm | 6.55e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 4.66e-08 | 1 |