FFCP PHASE1:Hg19::chr8:65492433..65492440,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27319 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11963 | |||
|TSSclassifier=strong | |||
|UniProt=B4DF88,Q8NFJ8 | |||
|association_with_transcript=-354bp_to_NM_152414_5end | |||
|cluster_id=chr8:65492433..65492440,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_BHLHE22_5end | |||
|id=chr8:65492433..65492440,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.37e-12!42;CL:0000860!1.94e-11!45;CL:0002194!9.98e-09!63;CL:0000576!9.98e-09!63;CL:0000040!9.98e-09!63;CL:0000559!9.98e-09!63;CL:0002009!2.58e-08!65;CL:0000839!2.91e-08!70;CL:0000766!4.00e-08!76;CL:0000557!4.45e-08!71;CL:0002087!4.62e-07!119;CL:0000738!8.78e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.83e-22;33!CL:0002057;9.83e-22;33!CL:0000473;4.57e-15;39!CL:0000234;4.57e-15;39!CL:0000576;2.59e-11;48!CL:0000766;1.76e-08;69!CL:0002087;5.20e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.14e-26,42;CL:0002057,6.14e-26,42;CL:0000473,2.18e-22,48;CL:0000234,2.18e-22,48;CL:0002194,2.05e-17,59;CL:0000576,2.05e-17,59;CL:0000040,2.05e-17,59;CL:0000559,2.05e-17,59;CL:0002009,8.98e-17,61;CL:0000839,2.45e-15,66;CL:0000557,4.49e-15,67;CL:0000766,7.14e-14,72;CL:0002087,2.68e-12,115;CL:0002031,1.16e-11,120;CL:0000738,6.19e-10,136;CL:0000763,1.76e-08,108;CL:0000049,1.76e-08,108;CL:0000047,2.62e-08,8;CL:0002032,6.34e-08,161;CL:0000837,6.34e-08,161;CL:0000037,1.81e-07,168;CL:0000988,6.15e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.57e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!7.52e-27!22;UBERON:0001950!2.26e-23!20;UBERON:0000956!3.70e-23!25;UBERON:0000203!3.70e-23!25;UBERON:0001869!2.48e-21!32;UBERON:0001893!8.60e-20!34;UBERON:0002020!9.76e-20!34;UBERON:0003528!9.76e-20!34;UBERON:0002791!2.04e-18!33;UBERON:0007023!3.03e-18!115;UBERON:0003080!6.23e-17!42;UBERON:0000073!7.36e-17!94;UBERON:0001016!7.36e-17!94;UBERON:0005743!8.09e-17!86;UBERON:0001017!1.09e-16!82;UBERON:0001049!1.13e-16!57;UBERON:0005068!1.13e-16!57;UBERON:0006241!1.13e-16!57;UBERON:0007135!1.13e-16!57;UBERON:0002616!6.91e-16!59;UBERON:0002780!1.42e-15!41;UBERON:0001890!1.42e-15!41;UBERON:0006240!1.42e-15!41;UBERON:0000955!4.41e-15!69;UBERON:0006238!4.41e-15!69;UBERON:0002021!2.66e-12!5;UBERON:0003056!3.18e-11!61;UBERON:0002346!5.35e-11!90;UBERON:0003075!7.93e-11!86;UBERON:0007284!7.93e-11!86;UBERON:0001871!6.27e-09!7;UBERON:0000200!1.98e-08!6;UBERON:0000033!1.01e-07!123;UBERON:0000153!1.02e-07!129;UBERON:0007811!1.02e-07!129;UBERON:0000924!3.20e-07!173;UBERON:0006601!3.20e-07!173;UBERON:0004121!5.33e-07!169;UBERON:0002193!5.66e-07!112;UBERON:0000349!7.22e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;9.09e-22;5!UBERON:0001950;3.68e-11;20!UBERON:0002619;3.80e-10;22!UBERON:0000956;6.43e-09;25!UBERON:0000203;6.43e-09;25!UBERON:0002902;5.24e-08;1!UBERON:0009899;5.24e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,8.38e-22,5;UBERON:0002371,5.05e-13,76;UBERON:0001474,6.65e-12,82;UBERON:0001950,3.86e-11,20;UBERON:0004765,1.22e-10,90;UBERON:0002405,3.19e-10,93;UBERON:0002619,3.96e-10,22;UBERON:0002390,1.39e-09,98;UBERON:0003061,1.39e-09,98;UBERON:0001434,2.41e-09,100;UBERON:0000956,6.68e-09,25;UBERON:0000203,6.68e-09,25;UBERON:0002193,1.76e-08,108;UBERON:0001016,1.79e-08,89;UBERON:0001017,5.37e-08,81;UBERON:0002902,6.68e-08,1;UBERON:0009899,6.68e-08,1;UBERON:0002791,6.63e-07,32;UBERON:0001869,6.63e-07,32 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45185470921107,2.05251473624864,1.18066171970519,0,0,0.309632246632152,0,0,0,0,0,0,2.76997704265939,1.20326668482085,0.434021741431704,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,6.89491361473237,2.5819387343353,0,0,0,0,8.57034898638527,9.30694178520671,6.39337125799041,0,0,0,5.80418477257168,2.8369261234557,1.24564449799115,0,0.521482918420201,0,2.42159801053347,9.20694089968912,3.16462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,3.09315525111078,2.01019518401218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399121573143,0,0,0.614481528616916,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0.615424027305347,0,0,0,0,0.0986434056369336,0,0,0,0.278304294485554,3.99227596002388,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.331737779793674,1.18219047581419,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,3.36680037793539,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0,0,0,0.496166021811951,0,0,0,0.544017803369474,0,0.306345576763462,0,0,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,2.23457967189298,0,0,0,0,0,0.0642292250964595,1.41696576325585,1.27707087245721,0.82046545696302,2.52071696221718,1.10651603942749,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0,1.09394961803644,0,0,0.175871244359621,0,0,0,0,0,0,0.115233987555779,0,0,0.328863867814245,0,0,0.156986185701028,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0.0679914901909147,2.61810414204226,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0,0,0,0.471464371102113,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | |||
|short_description=p6@BHLHE22 | |||
}} |
Latest revision as of 19:18, 18 September 2015
Short description: | p6@BHLHE22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_BHLHE22_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -354bp_to_NM_152414_5end |
EntrezGene: | BHLHE22 |
HGNC: | 11963 |
UniProt: | B4DF88Q8NFJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.14e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.14e-26 | 42 |
defensive cell | 2.18e-22 | 48 |
phagocyte | 2.18e-22 | 48 |
monopoietic cell | 2.05e-17 | 59 |
monocyte | 2.05e-17 | 59 |
monoblast | 2.05e-17 | 59 |
promonocyte | 2.05e-17 | 59 |
macrophage dendritic cell progenitor | 8.98e-17 | 61 |
myeloid lineage restricted progenitor cell | 2.45e-15 | 66 |
granulocyte monocyte progenitor cell | 4.49e-15 | 67 |
myeloid leukocyte | 7.14e-14 | 72 |
nongranular leukocyte | 2.68e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.16e-11 | 120 |
leukocyte | 6.19e-10 | 136 |
myeloid cell | 1.76e-08 | 108 |
common myeloid progenitor | 1.76e-08 | 108 |
neuronal stem cell | 2.62e-08 | 8 |
hematopoietic oligopotent progenitor cell | 6.34e-08 | 161 |
hematopoietic multipotent progenitor cell | 6.34e-08 | 161 |
hematopoietic stem cell | 1.81e-07 | 168 |
hematopoietic cell | 6.15e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 8.38e-22 | 5 |
bone marrow | 5.05e-13 | 76 |
bone element | 6.65e-12 | 82 |
neocortex | 3.86e-11 | 20 |
skeletal element | 1.22e-10 | 90 |
immune system | 3.19e-10 | 93 |
regional part of cerebral cortex | 3.96e-10 | 22 |
hematopoietic system | 1.39e-09 | 98 |
blood island | 1.39e-09 | 98 |
skeletal system | 2.41e-09 | 100 |
cerebral cortex | 6.68e-09 | 25 |
pallium | 6.68e-09 | 25 |
hemolymphoid system | 1.76e-08 | 108 |
nervous system | 1.79e-08 | 89 |
central nervous system | 5.37e-08 | 81 |
occipital pole | 6.68e-08 | 1 |
pole of cerebral hemisphere | 6.68e-08 | 1 |
regional part of telencephalon | 6.63e-07 | 32 |
cerebral hemisphere | 6.63e-07 | 32 |