FFCP PHASE1:Hg19::chr1:174933865..174933876,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9910 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24663 | |||
|TSSclassifier=strong | |||
|UniProt=B7ZAP0 | |||
|association_with_transcript=-28bp_to_ENST00000367688,NM_001243764,uc010pmv.1_5end | |||
|cluster_id=chr1:174933865..174933876,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_17_at_RABGAP1L_5end | |||
|id=chr1:174933865..174933876,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.46e-38!140;CL:0000037!4.52e-31!172;CL:0000566!4.52e-31!172;CL:0002032!2.28e-30!165;CL:0000837!2.28e-30!165;CL:0002087!6.36e-30!119;CL:0002031!3.79e-29!124;CL:0000988!7.11e-28!182;CL:0000766!3.07e-27!76;CL:0002057!4.86e-25!42;CL:0002009!3.65e-24!65;CL:0000763!3.35e-23!112;CL:0000049!3.35e-23!112;CL:0000839!9.08e-23!70;CL:0002194!1.27e-22!63;CL:0000576!1.27e-22!63;CL:0000040!1.27e-22!63;CL:0000559!1.27e-22!63;CL:0000860!1.35e-22!45;CL:0000557!5.65e-22!71;CL:0000791!3.12e-10!18;CL:0000789!3.12e-10!18;CL:0002420!3.12e-10!18;CL:0002419!3.12e-10!18;CL:0000790!3.12e-10!18;CL:0002393!3.25e-09!9;CL:0002397!3.25e-09!9;CL:0000094!1.30e-08!8;CL:0000084!2.76e-07!25;CL:0000827!2.76e-07!25;CL:0000453!3.82e-07!5;CL:0000542!5.06e-07!53;CL:0000051!5.06e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000576;4.64e-14;48!CL:0000775;5.75e-13;3!CL:0000875;2.04e-12;3!CL:0002396;2.04e-12;3!CL:0000094;2.70e-12;8!CL:0000766;6.59e-12;69!CL:0000473;6.77e-09;39!CL:0000234;6.77e-09;39!CL:0000081;7.63e-09;11!CL:0000453;9.30e-08;5!CL:0000860;6.11e-07;33!CL:0002057;6.11e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.38e-26,72;CL:0000738,1.87e-23,136;CL:0000763,5.40e-22,108;CL:0000049,5.40e-22,108;CL:0000473,1.10e-20,48;CL:0000234,1.10e-20,48;CL:0002194,7.61e-20,59;CL:0000576,7.61e-20,59;CL:0000040,7.61e-20,59;CL:0000559,7.61e-20,59;CL:0000839,3.25e-19,66;CL:0002009,4.79e-19,61;CL:0000037,8.82e-19,168;CL:0002032,1.33e-18,161;CL:0000837,1.33e-18,161;CL:0000988,2.07e-17,177;CL:0000557,6.19e-17,67;CL:0000860,1.42e-16,42;CL:0002057,1.42e-16,42;CL:0002393,4.10e-15,9;CL:0002397,4.10e-15,9;CL:0002087,5.11e-15,115;CL:0002031,3.61e-14,120;CL:0000775,5.66e-13,3;CL:0000875,1.76e-12,3;CL:0002396,1.76e-12,3;CL:0000094,2.77e-12,8;CL:0000081,7.77e-09,11;CL:0000453,9.53e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002057;2.72e-11;42!CL:0000049;9.66e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.33e-29!102;UBERON:0003061!4.33e-29!102;UBERON:0002193!5.85e-27!112;UBERON:0002371!6.31e-18!80;UBERON:0001474!9.95e-16!86;UBERON:0002405!9.76e-14!115;UBERON:0004765!1.78e-11!101;UBERON:0001434!1.78e-11!101;UBERON:0000178!5.77e-10!15;UBERON:0000179!5.77e-10!15;UBERON:0000463!5.77e-10!15;UBERON:0003081!2.59e-08!216;UBERON:0007023!1.10e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.59e-20;15!UBERON:0000179;1.59e-20;15!UBERON:0000463;1.59e-20;15!UBERON:0002390;2.23e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.69e-25,98;UBERON:0003061,2.69e-25,98;UBERON:0002193,2.61e-22,108;UBERON:0000178,1.92e-20,15;UBERON:0000179,1.92e-20,15;UBERON:0000463,1.92e-20,15;UBERON:0002371,2.16e-14,76;UBERON:0001474,5.23e-13,82;UBERON:0004765,1.88e-11,90;UBERON:0002405,6.14e-11,93;UBERON:0003081,1.80e-10,203;UBERON:0001434,7.31e-10,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,0.786728553697808,0.767658796194425,1.23852898652861,0,0,0,0.154934401160603,0.853015394924529,0,0,0.200544447470142,0.434021741431704,2.01523926815932,1.94336199611388,0.77272670290256,1.01778767145695,0.755751887377619,1.69808842831471,0.232429036905685,0,0.619412741790207,0,0.512321413058201,0.709446689665756,0,0,1.35426486594342,0.941211697713023,1.09162460023138,0.224723484445085,0.306083892370903,0.320929027076094,0.639337125799041,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0.622822248995575,0,0,2.17188844705117,0.605399502633369,1.10483290796269,0.632924774881769,3.59133986730301,1.91343869968539,2.51590374610051,2.02191536063691,1.65194582125657,2.89306056054744,2.85012743741249,2.58591680358817,5.29726045917438,1.75996244461323,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.411202997999018,3.34372990781356,1.30368906653436,0.946895611469467,0,1.33692548262208,0.294605907474837,0.664601683750863,1.08321545506006,1.66518715643378,2.08094956095805,0.493313713811028,0.552700035571697,1.15921234294021,0.14828656316206,0.535081656179426,0,0.793165398882963,0.383220493601921,1.03088233644789,0.759059076058509,0.637130828648193,0,0.950452044448374,1.05402583354441,0.511946444617674,0,1.18388626022008,1.64225599384209,0.604820229674197,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,1.40402559083543,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0,0,0.788123040807709,0,0.256686072559497,0,0,0,0,0,17.9761685747324,5.9832291840805,10.7748033493369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,1.02341449813341,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31555925987561,0.784306353074702,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,34.5064374277875,34.4086743214069,10.8232965563091,14.7703700783829,11.5181436464134,27.2358790700941,39.9623263556205,15.0693783495911,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.47748896947538,2.07875276582847,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0.538545866458633,0.434589487688032,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0.167821586975843,0,0.158936578980379,0,0.326465616318295,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0.586993856796269,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.873633341210151,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0.628817220398664,0.414239055347196,0.496166021811951,0.395223263795889,0,0,0,0,0.612691153526923,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,4.28692679446655,3.05589132720735,5.72478879895455,0,0,0,0.19998739585493,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35378591028663,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,2.83847584520444,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0.297046400327086,0,0,0.751871343838829,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0,0.217716747896961,0.342233301085281,0.404112318087525,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.366724332548599,0,0.665756774185513,0,0 | |||
|short_description=p17@RABGAP1L | |||
}} |
Latest revision as of 19:23, 18 September 2015
Short description: | p17@RABGAP1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_RABGAP1L_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -28bp_to_ENST00000367688, NM_001243764, uc010pmv.1_5end |
EntrezGene: | RABGAP1L |
HGNC: | 24663 |
UniProt: | B7ZAP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.38e-26 | 72 |
leukocyte | 1.87e-23 | 136 |
myeloid cell | 5.40e-22 | 108 |
common myeloid progenitor | 5.40e-22 | 108 |
defensive cell | 1.10e-20 | 48 |
phagocyte | 1.10e-20 | 48 |
monopoietic cell | 7.61e-20 | 59 |
monocyte | 7.61e-20 | 59 |
monoblast | 7.61e-20 | 59 |
promonocyte | 7.61e-20 | 59 |
myeloid lineage restricted progenitor cell | 3.25e-19 | 66 |
macrophage dendritic cell progenitor | 4.79e-19 | 61 |
hematopoietic stem cell | 8.82e-19 | 168 |
hematopoietic oligopotent progenitor cell | 1.33e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.33e-18 | 161 |
hematopoietic cell | 2.07e-17 | 177 |
granulocyte monocyte progenitor cell | 6.19e-17 | 67 |
classical monocyte | 1.42e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.42e-16 | 42 |
intermediate monocyte | 4.10e-15 | 9 |
CD14-positive, CD16-positive monocyte | 4.10e-15 | 9 |
nongranular leukocyte | 5.11e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 3.61e-14 | 120 |
neutrophil | 5.66e-13 | 3 |
non-classical monocyte | 1.76e-12 | 3 |
CD14-low, CD16-positive monocyte | 1.76e-12 | 3 |
granulocyte | 2.77e-12 | 8 |
blood cell | 7.77e-09 | 11 |
Langerhans cell | 9.53e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.69e-25 | 98 |
blood island | 2.69e-25 | 98 |
hemolymphoid system | 2.61e-22 | 108 |
blood | 1.92e-20 | 15 |
haemolymphatic fluid | 1.92e-20 | 15 |
organism substance | 1.92e-20 | 15 |
bone marrow | 2.16e-14 | 76 |
bone element | 5.23e-13 | 82 |
skeletal element | 1.88e-11 | 90 |
immune system | 6.14e-11 | 93 |
lateral plate mesoderm | 1.80e-10 | 203 |
skeletal system | 7.31e-10 | 100 |