FFCP PHASE1:Hg19::chr12:52463751..52463814,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:52463751..52463814,+ to FFCP PHASE1:Hg19::chr12:52463751..52463814,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=60673 | |EntrezGene=60673 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25679 | |HGNC=25679 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BSB4,F8VVA0,F8VQD9 | |UniProt=Q9BSB4,F8VVA0,F8VQD9 | ||
|association_with_transcript=0bp_to_ENST00000336854,ENST00000548915,ENST00000550604,ENST00000552544,ENST00000552947,ENST00000553049,NM_001098673,NM_021934,uc001rzu.3,uc009zmd.2_5end | |||
|cluster_id=chr12:52463751..52463814,+ | |||
|description=CAGE_peak_1_at_C12orf44_5end | |||
|id=chr12:52463751..52463814,+ | |||
|ontology_enrichment_celltype=CL:0000548!3.81e-24!679;CL:0000004!3.81e-24!679;CL:0000255!3.81e-24!679;CL:0000012!1.07e-23!682;CL:0000220!5.10e-18!246;CL:0002321!1.42e-17!248;CL:0000144!6.98e-16!625;CL:0002371!1.78e-15!591;CL:0000066!1.64e-14!254;CL:0000222!4.67e-14!119;CL:0000192!1.78e-13!42;CL:0000514!1.78e-13!42;CL:0000183!2.84e-13!59;CL:0000055!1.25e-12!180;CL:0000003!3.21e-12!722;CL:0000359!3.99e-12!32;CL:0000680!1.85e-11!57;CL:0000056!1.85e-11!57;CL:0000355!1.85e-11!57;CL:0000187!3.85e-11!54;CL:0000063!7.28e-11!578;CL:0000393!5.86e-10!60;CL:0000211!5.86e-10!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.43e-11;32!CL:0000192;1.72e-10;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.75e-18,250;CL:0000222,1.20e-14,121;CL:0000066,2.54e-14,253;CL:0000192,1.16e-13,43;CL:0000514,1.16e-13,43;CL:0000359,3.99e-12,32;CL:0000680,1.17e-11,58;CL:0000056,1.17e-11,58;CL:0000355,1.17e-11,58;CL:0000187,2.44e-11,55;CL:0000393,3.74e-10,61;CL:0000211,3.74e-10,61 | |||
|ontology_enrichment_development_v019=CL:0000514;1.72e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!9.08e-18!448;UBERON:0004120!9.08e-18!448;UBERON:0006603!9.08e-18!448;UBERON:0003914!3.08e-15!118;UBERON:0002100!6.76e-15!216;UBERON:0003104!4.08e-14!238;UBERON:0009142!4.08e-14!238;UBERON:0001637!4.19e-13!42;UBERON:0003509!4.19e-13!42;UBERON:0004572!4.19e-13!42;UBERON:0001981!7.46e-13!60;UBERON:0007500!7.46e-13!60;UBERON:0004537!7.46e-13!60;UBERON:0006965!7.46e-13!60;UBERON:0005256!2.27e-12!143;UBERON:0002049!2.36e-12!79;UBERON:0007798!2.36e-12!79;UBERON:0004872!3.50e-12!84;UBERON:0000055!7.69e-12!69;UBERON:0000490!2.63e-11!138;UBERON:0000486!7.47e-11!82;UBERON:0004290!2.25e-10!70;UBERON:0000914!3.65e-10!83;UBERON:0002329!3.65e-10!83;UBERON:0003077!3.65e-10!83;UBERON:0003059!3.65e-10!83;UBERON:0007282!3.65e-10!83;UBERON:0009618!3.65e-10!83;UBERON:0007285!3.65e-10!83;UBERON:0004573!4.72e-10!33;UBERON:0004571!4.72e-10!33;UBERON:0001134!1.65e-09!61;UBERON:0002036!1.65e-09!61;UBERON:0003082!1.65e-09!61;UBERON:0000468!7.89e-09!659;UBERON:0002385!1.35e-08!63;UBERON:0001015!1.35e-08!63;UBERON:0000383!1.35e-08!63;UBERON:0000467!2.04e-08!625;UBERON:0000480!3.01e-08!626;UBERON:0009569!5.07e-08!113;UBERON:0000923!5.68e-07!604;UBERON:0005291!5.68e-07!604;UBERON:0006598!5.68e-07!604;UBERON:0002532!5.68e-07!604;UBERON:0000466!7.95e-07!126;UBERON:0002050!8.42e-07!605;UBERON:0005423!8.42e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.67e-09;42!UBERON:0003509;2.67e-09;42!UBERON:0004572;2.67e-09;42!UBERON:0004573;4.01e-09;33!UBERON:0004571;4.01e-09;33!UBERON:0003914;1.58e-07;74!UBERON:0007500;1.79e-07;56!UBERON:0001981;1.79e-07;56!UBERON:0004537;1.79e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.28e-15,199;UBERON:0003914,4.94e-15,117;UBERON:0001637,4.19e-13,42;UBERON:0003509,4.19e-13,42;UBERON:0004572,4.19e-13,42;UBERON:0007503,5.52e-13,78;UBERON:0007500,1.30e-12,59;UBERON:0001981,1.30e-12,59;UBERON:0004537,1.30e-12,59;UBERON:0006965,1.30e-12,59;UBERON:0000490,1.77e-12,148;UBERON:0002049,4.05e-12,78;UBERON:0007798,4.05e-12,78;UBERON:0004872,5.97e-12,83;UBERON:0000055,1.32e-11,68;UBERON:0005256,3.18e-11,122;UBERON:0003104,3.60e-11,160;UBERON:0009142,3.60e-11,160;UBERON:0000486,4.79e-11,83;UBERON:0002329,1.44e-10,71;UBERON:0003059,1.44e-10,71;UBERON:0007282,1.44e-10,71;UBERON:0004290,1.44e-10,71;UBERON:0009618,1.44e-10,71;UBERON:0007524,1.45e-10,73;UBERON:0003077,3.96e-10,72;UBERON:0007285,3.96e-10,72;UBERON:0004573,4.72e-10,33;UBERON:0004571,4.72e-10,33;UBERON:0000926,5.04e-10,315;UBERON:0004120,5.04e-10,315;UBERON:0006603,5.04e-10,315;UBERON:0001134,1.06e-09,62;UBERON:0002036,1.06e-09,62;UBERON:0003082,1.06e-09,62;UBERON:0002385,8.79e-09,64;UBERON:0001015,8.79e-09,64;UBERON:0000383,8.79e-09,64;UBERON:0009569,3.64e-08,112 | |||
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| ||
|short_description=p1@C12orf44 | |||
}} | }} |
Latest revision as of 21:22, 18 September 2015
Short description: | p1@C12orf44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C12orf44_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000336854, ENST00000548915, ENST00000550604, ENST00000552544, ENST00000552947, ENST00000553049, NM_001098673, NM_021934, uc001rzu.3, uc009zmd.2_5end |
EntrezGene: | C12orf44 |
HGNC: | 25679 |
UniProt: | Q9BSB4F8VVA0F8VQD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.75e-18 | 250 |
mesodermal cell | 1.20e-14 | 121 |
epithelial cell | 2.54e-14 | 253 |
smooth muscle cell | 1.16e-13 | 43 |
smooth muscle myoblast | 1.16e-13 | 43 |
vascular associated smooth muscle cell | 3.99e-12 | 32 |
muscle precursor cell | 1.17e-11 | 58 |
myoblast | 1.17e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.17e-11 | 58 |
muscle cell | 2.44e-11 | 55 |
electrically responsive cell | 3.74e-10 | 61 |
electrically active cell | 3.74e-10 | 61 |