FFCP PHASE1:Hg19::chr2:182819174..182819188,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151242 | |EntrezGene=151242 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14940 | |HGNC=14940 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-30bp_to_ENST00000486067_5end | |association_with_transcript=-30bp_to_ENST00000486067_5end | ||
|cluster_id=chr2:182819174..182819188,+ | |||
|description=CAGE_peak_8_at_PPP1R1C_5end | |description=CAGE_peak_8_at_PPP1R1C_5end | ||
|id=chr2:182819174..182819188,+ | |id=chr2:182819174..182819188,+ | ||
|ontology_enrichment_celltype=CL:0002592;1.71e-14;3!CL:0000306;3.26e-11;4!CL:0002222;3.26e-11;4!CL:0002224;3.26e-11;4!CL:0002537;3.10e-09;5 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0002592;1.71e-14;3!CL:0000306;3.26e-11;4!CL:0002222;3.26e-11;4!CL:0002224;3.26e-11;4!CL:0002537;3.10e-09;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002592,1.60e-14,3;CL:0000306,3.79e-11,4;CL:0002222,3.79e-11,4;CL:0002224,3.79e-11,4;CL:0002537,3.22e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002370;1.91e-79;2!UBERON:0005058;1.91e-79;2!UBERON:0009113;1.91e-79;2!UBERON:0004177;1.33e-32;5!UBERON:0005057;1.33e-32;5!UBERON:0003498;1.71e-14;3!UBERON:0005985;1.71e-14;3!UBERON:0001621;1.71e-14;3!UBERON:0010077;3.26e-11;4!UBERON:0005389;3.26e-11;4!UBERON:0000484;3.26e-11;4!UBERON:0000965;3.26e-11;4!UBERON:0001803;3.26e-11;4!UBERON:0000305;5.86e-07;7!UBERON:0000077;6.72e-07;27!UBERON:0002405;6.72e-07;27 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.91e-79;2!UBERON:0005058;1.91e-79;2!UBERON:0009113;1.91e-79;2!UBERON:0004177;1.33e-32;5!UBERON:0005057;1.33e-32;5!UBERON:0003498;1.71e-14;3!UBERON:0005985;1.71e-14;3!UBERON:0001621;1.71e-14;3!UBERON:0010077;3.26e-11;4!UBERON:0005389;3.26e-11;4!UBERON:0000484;3.26e-11;4!UBERON:0000965;3.26e-11;4!UBERON:0001803;3.26e-11;4!UBERON:0000305;5.86e-07;7!UBERON:0000077;6.72e-07;27!UBERON:0002405;6.72e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.48e-40,4;UBERON:0005058,1.48e-40,4;UBERON:0009113,1.48e-40,4;UBERON:0003295,1.48e-40,4;UBERON:0005562,1.48e-40,4;UBERON:0003351,1.82e-27,6;UBERON:0004177,1.02e-23,7;UBERON:0005057,1.02e-23,7;UBERON:0000974,5.90e-17,10;UBERON:0003408,5.90e-17,10;UBERON:0001042,5.90e-17,10;UBERON:0009145,5.90e-17,10;UBERON:0006562,1.62e-15,11;UBERON:0009722,1.62e-15,11;UBERON:0007690,1.62e-15,11;UBERON:0001621,1.60e-14,3;UBERON:0010077,3.79e-11,4;UBERON:0005389,3.79e-11,4;UBERON:0000484,3.79e-11,4;UBERON:0002546,3.79e-11,4;UBERON:0000965,3.79e-11,4;UBERON:0001803,3.79e-11,4;UBERON:0003073,3.79e-11,4;UBERON:0005426,3.79e-11,4;UBERON:0008814,6.79e-10,18;UBERON:0001557,1.99e-09,19;UBERON:0003498,2.97e-09,5;UBERON:0005985,2.97e-09,5;UBERON:0000305,6.04e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0.154816123316076,0,0,0,0.852139206383318,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0.140450806702248,0.61246251376468,0.368502951935304,0,0,0,0,0,0,0.750711119231785,0.554128230968366,0,0.30648779579902,0,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0.271265023699736,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0.165284915360978,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0.235624804691373,0,1.58510321173008,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0,0.711418433484141,0.478278818186467,0,0,0.211673582723883,0,0.280797178113459,0,0,0,0.677167111206413,0,0,0,0,0,0.447352215784832,0.333698283423817,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0.576219191952599,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0.422401346077626,0,0,0,0,0,0,0,0,1.19730191562487,0.164185041498678,0,0.226624183040251,0.293104467356165,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.531459361253452,0.817826971279221,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0.991486114072017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346576998451015,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0.351742488719241,0,0,0.336283722218824,0.606965604236632,0.227662191351298,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0.940634592723046,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,2.19602293442421,1.67601728598816,0,0.0636471582781649,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p8@PPP1R1C | |short_description=p8@PPP1R1C | ||
}} | }} |
Latest revision as of 21:48, 18 September 2015
Short description: | p8@PPP1R1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PPP1R1C_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_ENST00000486067_5end |
EntrezGene: | PPP1R1C |
HGNC: | 14940 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 1.60e-14 | 3 |
crystallin accumulating cell | 3.79e-11 | 4 |
vertebrate lens cell | 3.79e-11 | 4 |
lens epithelial cell | 3.79e-11 | 4 |
amnion mesenchymal stem cell | 3.22e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.48e-40 | 4 |
hemolymphoid system gland | 1.48e-40 | 4 |
thymic region | 1.48e-40 | 4 |
pharyngeal gland | 1.48e-40 | 4 |
thymus primordium | 1.48e-40 | 4 |
pharyngeal epithelium | 1.82e-27 | 6 |
hemopoietic organ | 1.02e-23 | 7 |
immune organ | 1.02e-23 | 7 |
neck | 5.90e-17 | 10 |
gland of gut | 5.90e-17 | 10 |
chordate pharynx | 5.90e-17 | 10 |
pharyngeal region of foregut | 5.90e-17 | 10 |
pharynx | 1.62e-15 | 11 |
entire pharyngeal arch endoderm | 1.62e-15 | 11 |
early pharyngeal endoderm | 1.62e-15 | 11 |
coronary artery | 1.60e-14 | 3 |
cuboidal epithelium | 3.79e-11 | 4 |
transparent eye structure | 3.79e-11 | 4 |
simple cuboidal epithelium | 3.79e-11 | 4 |
cranial placode | 3.79e-11 | 4 |
lens of camera-type eye | 3.79e-11 | 4 |
epithelium of lens | 3.79e-11 | 4 |
lens placode | 3.79e-11 | 4 |
lens vesicle | 3.79e-11 | 4 |
pharyngeal arch system | 6.79e-10 | 18 |
upper respiratory tract | 1.99e-09 | 19 |
heart blood vessel | 2.97e-09 | 5 |
coronary vessel | 2.97e-09 | 5 |
amnion | 6.04e-07 | 7 |