FFCP PHASE1:Hg19::chr2:182819247..182819258,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151242 | |EntrezGene=151242 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14940 | |HGNC=14940 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000464264,ENST00000490645_5end | |association_with_transcript=0bp_to_ENST00000464264,ENST00000490645_5end | ||
|cluster_id=chr2:182819247..182819258,+ | |||
|description=CAGE_peak_6_at_PPP1R1C_5end | |description=CAGE_peak_6_at_PPP1R1C_5end | ||
|id=chr2:182819247..182819258,+ | |id=chr2:182819247..182819258,+ | ||
|ontology_enrichment_celltype=CL:0002541;2.23e-27;3!CL:0002253;3.52e-11;2!CL:0000349;4.24e-10;19!CL:0000346;7.02e-08;3!CL:1000428;7.02e-08;3 | |ontology_enrichment_celltype=CL:0000223!9.92e-13!59;CL:0002076!6.29e-11!43;CL:0000066!1.67e-09!254;CL:0002541!1.80e-08!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0002541;2.23e-27;3!CL:0002253;3.52e-11;2!CL:0000349;4.24e-10;19!CL:0000346;7.02e-08;3!CL:1000428;7.02e-08;3 | ||
|ontology_enrichment_disease=DOID:3493;1.82e-11;2 | |ontology_enrichment_celltype_v019_2=CL:0002541,3.56e-27,3;CL:0002253,3.02e-11,2;CL:0000349,4.58e-10,19;CL:0000346,6.78e-08,3;CL:1000428,6.78e-08,3 | ||
|ontology_enrichment_uberon=UBERON:0002370;4.49e-40;2!UBERON:0005058;4.49e-40;2!UBERON:0009113;4.49e-40;2!UBERON:0003124;2.23e-27;3!UBERON:0000920;2.23e-27;3!UBERON:0001052;8.13e-21;4!UBERON:0005631;1.40e-18;10!UBERON:0000158;1.40e-18;10!UBERON:0004907;7.22e-17;5!UBERON:0004177;1.03e-16;5!UBERON:0005057;1.03e-16;5!UBERON:0000059;3.43e-08;11!UBERON:0000478;4.05e-08;24!UBERON:0000412;7.02e-08;3!UBERON:0001992;7.02e-08;3 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:299!1.75e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.82e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.82e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.97e-13!14;UBERON:0000158!3.97e-13!14;UBERON:0004119!1.03e-10!169;UBERON:0000925!1.03e-10!169;UBERON:0006595!1.03e-10!169;UBERON:0005911!7.38e-09!82;UBERON:0003124!1.01e-08!7;UBERON:0000077!1.43e-08!130;UBERON:0000476!1.80e-08!3;UBERON:0000920!1.80e-08!3;UBERON:0003929!3.44e-08!54;UBERON:0001007!3.26e-07!155;UBERON:0001555!3.26e-07!155;UBERON:0007026!3.26e-07!155;UBERON:0000478!7.59e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.49e-40;2!UBERON:0005058;4.49e-40;2!UBERON:0009113;4.49e-40;2!UBERON:0003124;2.23e-27;3!UBERON:0000920;2.23e-27;3!UBERON:0001052;8.13e-21;4!UBERON:0005631;1.40e-18;10!UBERON:0000158;1.40e-18;10!UBERON:0004907;7.22e-17;5!UBERON:0004177;1.03e-16;5!UBERON:0005057;1.03e-16;5!UBERON:0000059;3.43e-08;11!UBERON:0000478;4.05e-08;24!UBERON:0000412;7.02e-08;3!UBERON:0001992;7.02e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.56e-27,3;UBERON:0001052,7.00e-21,4;UBERON:0002370,1.05e-20,4;UBERON:0005058,1.05e-20,4;UBERON:0009113,1.05e-20,4;UBERON:0003295,1.05e-20,4;UBERON:0005562,1.05e-20,4;UBERON:0004907,6.40e-17,5;UBERON:0003351,3.71e-14,6;UBERON:0005631,1.98e-13,14;UBERON:0000158,1.98e-13,14;UBERON:0004177,2.82e-12,7;UBERON:0005057,2.82e-12,7;UBERON:0003124,2.98e-12,7;UBERON:0000974,7.07e-09,10;UBERON:0003408,7.07e-09,10;UBERON:0001042,7.07e-09,10;UBERON:0009145,7.07e-09,10;UBERON:0000059,3.25e-08,11;UBERON:0006562,3.76e-08,11;UBERON:0009722,3.76e-08,11;UBERON:0007690,3.76e-08,11;UBERON:0000478,4.31e-08,24;UBERON:0000412,6.78e-08,3;UBERON:0001992,6.78e-08,3;UBERON:0004923,1.26e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232401601740905,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.818238361772504,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671928512795438,0.708875486211932,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.618246069886334,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.638063562472921,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0.95497793895076,2.37571744666111,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0.762760950878299,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23300811812344,0.366390373607449,1.06606955203727,0,0,0,0,0,0,0,0,0.210998064528027,0.816164040795739,0,1.73110911793673,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240476460754601,0.426905989478705,0,0.432271251462318,0,0,0,0,0,0.271808412147228,0.104602846312333,0,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.247247575143499,0.606631894687664,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0.342173675768659,0,0.320362237703084,0,0,0,0,1.09613338542806,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.808679663052368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0.227662191351298,0,0.230467975111559,0,0,0,0.118193840883968,0,0,0,2.24217730651031,0,0,0,0,0,0.348724276104376,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,3.53561982448581,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0.707029641304878,0,0,0,0,0,0,0.0999411559249289,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,1.35636710655613,1.98639085746745,0,0,0,0,0,0,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232401601740905,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.818238361772504,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671928512795438,0.708875486211932,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.618246069886334,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.638063562472921,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0.95497793895076,2.37571744666111,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0.762760950878299,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23300811812344,0.366390373607449,1.06606955203727,0,0,0,0,0,0,0,0,0.210998064528027,0.816164040795739,0,1.73110911793673,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240476460754601,0.426905989478705,0,0.432271251462318,0,0,0,0,0,0.271808412147228,0.104602846312333,0,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.247247575143499,0.606631894687664,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0.342173675768659,0,0.320362237703084,0,0,0,0,1.09613338542806,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.808679663052368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0.227662191351298,0,0.230467975111559,0,0,0,0.118193840883968,0,0,0,2.24217730651031,0,0,0,0,0,0.348724276104376,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,3.53561982448581,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0.707029641304878,0,0,0,0,0,0,0.0999411559249289,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,1.35636710655613,1.98639085746745,0,0,0,0,0,0,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p6@PPP1R1C | |short_description=p6@PPP1R1C | ||
}} | }} |
Latest revision as of 21:49, 18 September 2015
Short description: | p6@PPP1R1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PPP1R1C_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000464264, ENST00000490645_5end |
EntrezGene: | PPP1R1C |
HGNC: | 14940 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.56e-27 | 3 |
epithelial cell of large intestine | 3.02e-11 | 2 |
extraembryonic cell | 4.58e-10 | 19 |
hair follicle dermal papilla cell | 6.78e-08 | 3 |
stem cell of epidermis | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.56e-27 | 3 |
rectum | 7.00e-21 | 4 |
thymus | 1.05e-20 | 4 |
hemolymphoid system gland | 1.05e-20 | 4 |
thymic region | 1.05e-20 | 4 |
pharyngeal gland | 1.05e-20 | 4 |
thymus primordium | 1.05e-20 | 4 |
lower digestive tract | 6.40e-17 | 5 |
pharyngeal epithelium | 3.71e-14 | 6 |
extraembryonic membrane | 1.98e-13 | 14 |
membranous layer | 1.98e-13 | 14 |
hemopoietic organ | 2.82e-12 | 7 |
immune organ | 2.82e-12 | 7 |
chorion | 2.98e-12 | 7 |
neck | 7.07e-09 | 10 |
gland of gut | 7.07e-09 | 10 |
chordate pharynx | 7.07e-09 | 10 |
pharyngeal region of foregut | 7.07e-09 | 10 |
large intestine | 3.25e-08 | 11 |
pharynx | 3.76e-08 | 11 |
entire pharyngeal arch endoderm | 3.76e-08 | 11 |
early pharyngeal endoderm | 3.76e-08 | 11 |
extraembryonic structure | 4.31e-08 | 24 |
dermal papilla | 6.78e-08 | 3 |
papillary layer of dermis | 6.78e-08 | 3 |
organ component layer | 1.26e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.82e-11 | 2 |